BAC Information

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BAC

Clone NameB6Ng01-252H19
Chromosome7 (Build37)
Map Location 120,160,983 - 120,292,562
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
Downstream geneArntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252H19.bB6Ng01-252H19.g
ACCGA059470GA059471
length101457
definitionB6Ng01-252H19.b B6Ng01-252H19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,160,983 - 120,161,082)(120,292,100 - 120,292,562)
sequence
tcttactaaaccaaggtccagaaagtgagttttgaaacagaccagctttt
gtgtaaaaggaagcgtgcagttttccttttaggatgggggagggggttgt
t
agccttcttgaactcctgcaagactagtaacataacagcattatggaagt
gttttagaagaggattctgggaaggaacctctgtttcaaaggcagctcac
taacgtgactcatcaaaccaccgtgagccatggagagatgcttgagagag
caggcgcctctctgaggaaaagtgcgtactccagtggtagactcgctcac
ccaaggctgacacacttccctggaagaacaagttagcaaatggtgattat
ttcaagtcacccacacccaagagacaccttctcggtatgtggttgtcctt
aagggacatcattaaactctggtgttctgtagcccagttggtcatcagat
aaatcatcagatttccttggaggaatatcttttgttttttgatttttaaa
aaaaatagacaatgtgtgtgaatatgtatgtatgtatgtatgtatatgtg
tatgtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120160983_120161082
seq2: B6Ng01-252H19.b_53_153

seq1  TCTTACTAAACCAAGGTCCAGAAAGTGAG-TGGGAAACAGACCAGCTTTT  49
      ||||||||||||||||||||||||||||| |  |||||||||||||||||
seq2  TCTTACTAAACCAAGGTCCAGAAAGTGAGTTTTGAAACAGACCAGCTTTT  50

seq1  GTGTAAAAGGAAGCGTGCAGTTTTCCTTTTAGGATGGGGGAGGGGGTTGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAAGGAAGCGTGCAGTTTTCCTTTTAGGATGGGGGAGGGGGTTGT  100

seq1  T  100
      |
seq2  T  101

seq1: chr7_120292100_120292562
seq2: B6Ng01-252H19.g_66_528 (reverse)

seq1  GCACATACACATATACATACATACATACATACATATTCACACACATTGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATACACATATACATACATACATACATACATATTCACACACATTGTC  50

seq1  TATTTTTTTTAAAAATCAAAAAACAAAAGATATTCCTCCAAGGAAATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTTTAAAAATCAAAAAACAAAAGATATTCCTCCAAGGAAATCTG  100

seq1  ATGATTTATCTGATGACCAACTGGGCTACAGAACACCAGAGTTTAATGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATTTATCTGATGACCAACTGGGCTACAGAACACCAGAGTTTAATGAT  150

seq1  GTCCCTTAAGGACAACCACATACCGAGAAGGTGTCTCTTGGGTGTGGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCTTAAGGACAACCACATACCGAGAAGGTGTCTCTTGGGTGTGGGTG  200

seq1  ACTTGAAATAATCACCATTTGCTAACTTGTTCTTCCAGGGAAGTGTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATAATCACCATTTGCTAACTTGTTCTTCCAGGGAAGTGTGTCA  250

seq1  GCCTTGGGTGAGCGAGTCTACCACTGGAGTACGCACTTTTCCTCAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGGTGAGCGAGTCTACCACTGGAGTACGCACTTTTCCTCAGAGAG  300

seq1  GCGCCTGCTCTCTCAAGCATCTCTCCATGGCTCACGGTGGTTTGATGAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTGCTCTCTCAAGCATCTCTCCATGGCTCACGGTGGTTTGATGAGT  350

seq1  CACGTTAGTGAGCTGCCTTTGAAACAGAGGTTCCTTCCCAGAATCCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTAGTGAGCTGCCTTTGAAACAGAGGTTCCTTCCCAGAATCCTCTT  400

seq1  CTAAAACACTTCCATAATGCTGTTATGTTACTAGTCTTGCAGGAGTTCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACACTTCCATAATGCTGTTATGTTACTAGTCTTGCAGGAGTTCAA  450

seq1  GAAGGCTGAATTC  463
      |||||||||||||
seq2  GAAGGCTGAATTC  463