BAC Information

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BAC

Clone NameB6Ng01-253C21
Chromosome7 (Build37)12 (Build37)
Map Location 68,331,864 - 68,332,39025,931,734 - 25,932,795
singlet/doubletsingletsinglet
Overlap geneD0Kist2
Upstream geneLOC100041201, LOC100041211, LOC664896, LOC100041229, LOC625287, LOC100041248
Downstream geneLOC100041259, EG664943, B230209E15Rik, EG620934, LOC100041293
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253C21.bB6Ng01-253C21.g
ACCGA059984GA059985
length1,1501,048
definitionB6Ng01-253C21.b B6Ng01-253C21.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(68,331,864 - 68,332,390)(25,931,734 - 25,932,795)
sequence
gaattcctctttaaactctactgtattttgaactttgcttacatgatttc
ccttgaaagaagtggcttctatttttttttaattgggtatatatttcatt
tacatttccaatgctatcccaaaagtcccccacatgctcccccacccact
cccctacccacccactcccattcttggcccctgtactgaggcacataaag
tttgcaagaccaaggggcctctcttcccaatgatggccaactaggccatc
ttctgatacatatgcagctagtgacacgagctctggggtactggttagtt
cataatgttgttccacctatagggttgcagaccccttcagctccttgggt
actttctctagcacttccattgggggccctgtgttccatccaatagctga
ctgtgagcatccacttatgtgtttgccaggccacggcacagcctcacaag
agacagctatattagggtcctttcagcaaaatcttgctgccgtatgcaat
ggtgtctgaatttgaagattgcttttggcaagatagccatttttactata
ttactatattgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagttcttatcata
cagatcgtttacttccttagttagagtaacaccaaggtattttatattac
ttgtgaccattgagaagggtgttgtttccctaatttctttctcagcctgt
ttatcctttgtgtacagaaaggccattgacttttttgagttaattttata
tccagctacttcaccaaagctctttatcaggtttaggagttctctggtgg
aatttttagtgttactcatatatactatcatatcatctgcaaaatgtgat
attttgacttcttcctttccaatttgtatccccttgatctccttttattg
tggaatagctctggataggaattcaagtactatgttgaataggtatggat
aaagtaggcagccttgtctagtccttgattttagtgggattgcttccagc
ttctcaccatttacttgatgttgggctactgggttgcttgtagaatgctt
ttatcatgtttttggtatgggcttgaattccttgatctttccagaccttt


gaattctcgatttcagcagagagttattttgtacacttttactacgctta
tccaataaaagcacaactgttcatggagtcattaagctgtgcttttagga
gatgccgtcaaggaaagcaggccacaaatcgagcctgatttgctcaactg
gtttgagttgccttttgtcaaagccacatcaaacctgcaatctgcgggct
ctctttcccttgtgaaattgtcaccctgaacacttggaatcgcttttggt
tctaggagacctgtcatcattcaaagtgcccacgtgtgctcaggcctgtg
atgtggctcctgacctgagggagtgatgaaggaagcaggatgctataggg
aaacaggtggtgtggggcgtggctactgtgggagtgggaaaaggagggca
tgatgccatctattagaaacctttctttccggggctccacttcagtgttg
gcctgtgacagtctaatggactcttttttatatacttattacagatctag
ttgtcaaaggcaggatgaaggttatggggaagcatggggagacattctaa
gacccactttatctcattttgtccagagaaaatctttggttatagttacc
ccacatctttggtctcttggccatagctgggtggcattctattgctagct
actagggaggctgggagagagcatcaagaatgttactaacagccgggcag
tagtggcacatgcctttaatcccagcacttgggaggcagaggcagaggca
gaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcaga
ggcagaggcagaggcagaggcagaggcagaggcagaggcagaggcagagg
cagaggcagaggcagaggcagaggcagaggcagaggcagaggcagaggca
gacagacttctgagttcgaggccagcctggtctacaatgagttccaggac
agccagggctatacagagaaactctgtctcaaaaaaacaaacaaacaaaa
acaacaaacaagatgtatacatctgacattgtgtcagcactcagggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_68331864_68332390
seq2: B6Ng01-253C21.b_663_1191 (reverse)

seq1  AAAGTTCTGGAAAGATC-AGGAATTCAAGGCCCATACC-TAAACATGATA  48
      |||| |||||||||||| |||||||||| |||||||||  ||||||||||
seq2  AAAGGTCTGGAAAGATCAAGGAATTCAA-GCCCATACCAAAAACATGATA  49

seq1  AAAGCAATCTAC-AGCAAACCAGTAG-CCAACATCAAAGTAAATGGAGAG  96
      |||||| ||||| ||||| ||||||| |||||||| |||||||||| |||
seq2  AAAGCATTCTACAAGCAACCCAGTAGCCCAACATC-AAGTAAATGGTGAG  98

seq1  AAGCTGGAAGCAATCCCACTAAAATCAGGGACTAGACAAGGCTGCCCACT  146
      ||||||||||||||||||||||||||| |||||||||||||||||| |||
seq2  AAGCTGGAAGCAATCCCACTAAAATCAAGGACTAGACAAGGCTGCCTACT  148

seq1  TTCTCCCTACCTTTTCAACATAGTACTTGAAGTATTAGCCAGAGCAATTC  196
      || ||| ||||| |||||||||||||||||| |  || ||||||| ||||
seq2  TTATCCATACCTATTCAACATAGTACTTGAATTCCTATCCAGAGCTATTC  198

seq1  GACAACAAAAGGAGATCAAGGGGATACAAATTGGAAAAGAGGAAGTCAAA  246
       |||| ||||||||||||||||||||||||||||||| || |||||||||
seq2  CACAATAAAAGGAGATCAAGGGGATACAAATTGGAAAGGAAGAAGTCAAA  248

seq1  ATATCACTTTTTGCAGATGATATGATAGTATATATAAGTGACCCTAAAAA  296
      ||||||| ||||||||||||||||||||||||||| ||| || |||||||
seq2  ATATCACATTTTGCAGATGATATGATAGTATATATGAGTAACACTAAAAA  298

seq1  TTCCACCAGAGAACTCCTAAACCTGATAAACAGCTTCGGTGAAGTAGCTG  346
      |||||||||||||||||||||||||||||| ||||| |||||||||||||
seq2  TTCCACCAGAGAACTCCTAAACCTGATAAAGAGCTTTGGTGAAGTAGCTG  348

seq1  GATATAAAATTAACTCAAACAAGTCAATGGCCTTTCTCTACACAAAGAAT  396
      ||||||||||||||||||| ||||||||||||||||| ||||||||| ||
seq2  GATATAAAATTAACTCAAAAAAGTCAATGGCCTTTCTGTACACAAAGGAT  398

seq1  AAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATAGTCAC  446
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAACAGGCTGAGAAAGAAATTAGGGAAACAACACCCTTCTCAATGGTCAC  448

seq1  AAATAATATAAAATATCTCGGCGTGACTCTAACTAAGGAAGTGAAAGATC  496
      || |||||||||||| || || || ||||||||||||||||| || ||||
seq2  AAGTAATATAAAATACCTTGGTGTTACTCTAACTAAGGAAGTAAACGATC  498

seq1  TGTATGATAAAAACTTCAAGTCTCTGAAGAA  527
      |||||||||| ||||||||||||||||||||
seq2  TGTATGATAAGAACTTCAAGTCTCTGAAGAA  529


seq1: chr12_25931734_25932795
seq2: B6Ng01-253C21.g_65_1112

seq1  GAATTCTCGATTTCAGCAGAGAGTTATTTTGTACACTTTTACTACGCTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCGATTTCAGCAGAGAGTTATTTTGTACACTTTTACTACGCTTA  50

seq1  TCCAATAAAAGCACAACTGTTCATGGAGTCATTAAGCTGTGCTTTTAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAATAAAAGCACAACTGTTCATGGAGTCATTAAGCTGTGCTTTTAGGA  100

seq1  GATGCCGTCAAGGAAAGCAGGCCACAAATCGAGCCTGATTTGCTCAACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCGTCAAGGAAAGCAGGCCACAAATCGAGCCTGATTTGCTCAACTG  150

seq1  GTTTGAGTTGCCTTTTGTCAAAGCCACATCAAACCTGCAATCTGCGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGTTGCCTTTTGTCAAAGCCACATCAAACCTGCAATCTGCGGGCT  200

seq1  CTCTTTCCCTTGTGAAATTGTCACCCTGAACACTTGGAATCGCTTTTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTCCCTTGTGAAATTGTCACCCTGAACACTTGGAATCGCTTTTGGT  250

seq1  TCTAGGAGACCTGTCATCATTCAAAGTGCCCACGTGTGCTCAGGCCTGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGAGACCTGTCATCATTCAAAGTGCCCACGTGTGCTCAGGCCTGTG  300

seq1  ATGTGGCTCCTGACCTGAGGGAGTGATGAAGGAAGCAGGATGCTATAGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGCTCCTGACCTGAGGGAGTGATGAAGGAAGCAGGATGCTATAGGG  350

seq1  AAACAGGTGGTGTGGGGCGTGGCTACTGTGGGAGTGGGAAAAGGAGGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGTGGTGTGGGGCGTGGCTACTGTGGGAGTGGGAAAAGGAGGGCA  400

seq1  TGATGCCATCTATTAGAAACCTTTCTTTCCGGGGCTCCACTTCAGTGTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGCCATCTATTAGAAACCTTTCTTTCCGGGGCTCCACTTCAGTGTTG  450

seq1  GCCTGTGACAGTCTAATGGACTCTTTTTTATATACTTATTACAGATCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGACAGTCTAATGGACTCTTTTTTATATACTTATTACAGATCTAG  500

seq1  TTGTCAAAGGCAGGATGAAGGTTATGGGGAAGCATGGGGAGACATTCTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAAAGGCAGGATGAAGGTTATGGGGAAGCATGGGGAGACATTCTAA  550

seq1  GACCCACTTTATCTCATTTTGTCCAGAGAAAATCTTTGGTTATAGTTACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCACTTTATCTCATTTTGTCCAGAGAAAATCTTTGGTTATAGTTACC  600

seq1  CCACATCTTTGGTCTCTTGGCCATAGCTGGGTGGCATTCTATTGCTAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATCTTTGGTCTCTTGGCCATAGCTGGGTGGCATTCTATTGCTAGCT  650

seq1  ACTAGGGAGGCTGGGAGAGAGCATCAAGAATGTTACTAACAGCCGGGCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGGAGGCTGGGAGAGAGCATCAAGAATGTTACTAACAGCCGGGCAG  700

seq1  TAGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGAGGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGCACATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGAGGCA  750

seq1  GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGA  800

seq1  GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGG  850

seq1  CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  900

seq1  GACAGACTTCTGAGTTCGAGGCCAGCCTGGTCTACAAATGAGTTCCAGGA  950
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GACAGACTTCTGAGTTCGAGGCCAGCCTGGTCTAC-AATGAGTTCCAGGA  949

seq1  CAGCCAGGGCTATACAGAGAAACCCTGTCTCAAAAAAACAAAACAAAACA  1000
      ||||||||||||||||||||||| ||||||||||||||||||   |||||
seq2  CAGCCAGGGCTATACAGAGAAACTCTGTCTCAAAAAAACAAA--CAAACA  997

seq1  AAAAACAAACAAACAAAGAATGTTAATAACATCTTGACCAATTGTGTCCA  1050
      ||||   |||||||||   ||||  || ||||| ||||  ||||||| ||
seq2  AAAA--CAACAAACAA--GATGT--AT-ACATC-TGAC--ATTGTGT-CA  1036

seq1  GCACTCAGGGCT  1062
      ||||||||||||
seq2  GCACTCAGGGCT  1048


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