BAC Information

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BAC

Clone NameB6Ng01-253F06
Chromosome7 (Build37)
Map Location 30,825,509 - 30,946,625
singlet/doubletdoublet
Overlap geneZfp14, LOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146
Upstream geneRyr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568
Downstream geneEG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253F06.bB6Ng01-253F06.g
ACCGA060094GA060095
length1,077806
definitionB6Ng01-253F06.b B6Ng01-253F06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(30,825,509 - 30,826,591)(30,945,821 - 30,946,625)
sequence
gaattctgggccactgaagggagggagggaccagcagatggatggaggaa
agcctcgaggagccgagacaacagctgactgagcatgcagcatgcaaccc
tgagcttatatccccagctcccatgtaagaagccaggggtggcagtattc
tgtcattctagcactaggcaagaggatgaggagccctgggcatttgctag
catgccattctagccaattcaatgagttccaggttcgctgtggctatgtc
taaaaaataaagtaaatatgccactaaagaagataccatacatagatctc
tgtctctacatgcacacacacacacacacaaacaagcacacaacacacag
atgctcatcctcacacatgaatgttttctcaacacacataaaagaaaaga
aacctgaagaccaacaagagaggccacacctacaccagcctccaccaggc
tccaggcacacaccaccacgcccagcccacaagtaggttggttggtttgc
ctgttttggatcaggaatggatgctgagttttgtggtgtagtgtctttac
attaatacagataaccatatagtttcttttgttgatcttgtttagctagc
accattgtttctgcaattgcttggatgcaagaagttagacagccactttt
gttaatcatttagcaaaaaatgttgctactgctctgggtattcaagagga
tttagattggtgtttagaacaacggatcgatgttctttatgatactgttc
aaattactggagaggaggttcagagtttaagagtaagaagccatctcaag
tgtcacagtaaataccaatggatttgtgtcacttctagaatttacaatga
cagccactataattggtagggtacttgcagggtatttggcataattctgg
atgtttaactttgcataccgagtataaatttaaagaatgctgctctgctg
agctttgatgctgcagatacagctgataaaattatttgtgacttaaggtc
agtaattccacttggtcaagcttcaaaatggcttaatatagtttgacatg
tgaccctctgtctgggcatacttttat
gaattcacaatgaagggaaagacatgtgtatgatacaggcctgcaatcag
cgaatgcagcggtggaaaagcagagcagtgctgaactgtgaacacagtcg
tctgcggtcaagagtggcaggcaggcaggcctgttgtgacggctgtcagt
gtggatctgcgggttgtcactagtccaggtaccgaggacagacgttatag
agtgacactgtccatttaccaggacttagaacatgaaaacacttgcttca
gctgaacaccaagacgacgtttggaggtgaaacctgcacaccacaaacta
taaccgatagtaaaagtcagatatatggggggtattgaaagcagaaataa
agaaatgctatactttatacaaggttgactttgggagtgggaaaacattc
cttgtaatatttgaaaatacttagaaattctcatgagtatttatgctcag
gaggtgaggcactaggaaattgaccatgacttaatttagactagccaaat
gttagaactgaactgcctgttggaaatggaatgagaaaatttttggtgga
ctgttacgcagacatctggcagatggaacagacgaggtgtgtgcgtacct
ggaaggactctggaagtgatgtgagggaaactcaatgtacaggatgcata
cagtacagtgactttcaagttaaaatttccttctggaaactcagtgtatt
atggtataaatacatgtaaatgttgagatgcatcagaaggatgcagacca
acgcctgagagaggatggcaagcagtgggagggacggacagagggaggga
gggaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30825509_30826591
seq2: B6Ng01-253F06.b_43_1119

seq1  GAATTCTGGGCCACTGAAGGGAGGGAGGGACCAGCAGATGGATGGAGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGCCACTGAAGGGAGGGAGGGACCAGCAGATGGATGGAGGAA  50

seq1  AGCCTCGAGGAGCCGAGACAACAGCTGACTGAGCATGCAGCATGCAACCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCGAGGAGCCGAGACAACAGCTGACTGAGCATGCAGCATGCAACCC  100

seq1  TGAGCTTATATCCCCAGCTCCCATGTAAGAAGCCAGGGGTGGCAGTATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTTATATCCCCAGCTCCCATGTAAGAAGCCAGGGGTGGCAGTATTC  150

seq1  TGTCATTCTAGCACTAGGCAAGAGGATGAGGAGCCCTGGGCATTTGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTCTAGCACTAGGCAAGAGGATGAGGAGCCCTGGGCATTTGCTAG  200

seq1  CATGCCATTCTAGCCAATTCAATGAGTTCCAGGTTCGCTGTGGCTATGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCATTCTAGCCAATTCAATGAGTTCCAGGTTCGCTGTGGCTATGTC  250

seq1  TAAAAAATAAAGTAAATATGCCACTAAAGAAGATACCATACATAGATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATAAAGTAAATATGCCACTAAAGAAGATACCATACATAGATCTC  300

seq1  TGTCTCTACATGCACACACACACACACACAAACAAGCACACAACACACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTACATGCACACACACACACACACAAACAAGCACACAACACACAG  350

seq1  ATGCTCATCCTCACACATGAATGTTTTCTCAACACACATAAAAGAAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCATCCTCACACATGAATGTTTTCTCAACACACATAAAAGAAAAGA  400

seq1  AACCTGAAGACCAACAAGAGAGGCCACACCTACACCAGCCTCCACCAGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGAAGACCAACAAGAGAGGCCACACCTACACCAGCCTCCACCAGGC  450

seq1  TCCAGGCACACACCACCACGCCCAGCCCACAAGTAGGTTGGTTGGTTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGCACACACCACCACGCCCAGCCCACAAGTAGGTTGGTTGGTTTGC  500

seq1  CTGTTTTGGATCAGGAATGGATGCTGAGTTTTGTGGTGTAGTGTCTTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGGATCAGGAATGGATGCTGAGTTTTGTGGTGTAGTGTCTTTAC  550

seq1  ATTAATACAGATAACCATATAGTTTCTTTTGTTGATCTTGTTTAGCTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATACAGATAACCATATAGTTTCTTTTGTTGATCTTGTTTAGCTAGC  600

seq1  ACCATTGTTTCTGCAATTGCTTGGATGCAAGAAGTTAGACAGCCACTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATTGTTTCTGCAATTGCTTGGATGCAAGAAGTTAGACAGCCACTTTT  650

seq1  GTTAATCATTTAGCAAAAAATGTTGCTACTGCTCTGGGTATTCAAGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCATTTAGCAAAAAATGTTGCTACTGCTCTGGGTATTCAAGAGGA  700

seq1  TTTAGATTGGTGTTTAGAACAACGGATCGATGTTCTTTATGATACTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATTGGTGTTTAGAACAACGGATCGATGTTCTTTATGATACTGTTC  750

seq1  AAATTACTGGAGAGGAGGTTCAGAGTTTAAGAGTAAGAAGCCATCTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACTGGAGAGGAGGTTCAGAGTTTAAGAGTAAGAAGCCATCTCAAG  800

seq1  TGTCACAGTAAATACCAATGGATTTGTGTCACTTCTAGAATTTACAATGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACAGTAAATACCAATGGATTTGTGTCACTTCTAGAATTTACAATGA  850

seq1  CAGCCACTATAATTGGTAGGGTACTTGCAGGGTATTTGGCATAATTCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACTATAATTGGTAGGGTACTTGCAGGGTATTTGGCATAATTCTGG  900

seq1  ATGTTTAACTTTGCATACCGAGTATAAATTTAAAGAATGCTGCTCTGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAACTTTGCATACCGAGTATAAATTTAAAGAATGCTGCTCTGCTG  950

seq1  AGCTTTGATGCTGCAGATACAGCTGATAAAATTATTTGTGACTTAAGGTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGATGCTGCAGATACAGCTGATAAAATTATTTGTGACTTAAGGTC  1000

seq1  AGTAATTCCACCTTGGTCAAGCTTCAAAAATGGCTT-ATATAGTTTGACC  1049
      |||||||||| |||||||||||||| |||||||||| ||||||||||| |
seq2  AGTAATTCCA-CTTGGTCAAGCTTC-AAAATGGCTTAATATAGTTTGA-C  1047

seq1  ATGTTGGCCCTTCTTGTCCTGGGAATACTTTTAT  1083
      ||| || ||||   ||| ||||| ||||||||||
seq2  ATG-TGACCCT--CTGT-CTGGGCATACTTTTAT  1077

seq1: chr7_30945821_30946625
seq2: B6Ng01-253F06.g_62_866 (reverse)

seq1  TTCCCTCCCTCCCTCTGTCCGTCCCTCCCACTGCTTGCCATCCTCTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCCCTCCCTCTGTCCGTCCCTCCCACTGCTTGCCATCCTCTCTCA  50

seq1  GGCGTTGGTCTGCATCCTTCTGATGCATCTCAACATTTACATGTATTTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTTGGTCTGCATCCTTCTGATGCATCTCAACATTTACATGTATTTAT  100

seq1  ACCATAATACACTGAGTTTCCAGAAGGAAATTTTAACTTGAAAGTCACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATAATACACTGAGTTTCCAGAAGGAAATTTTAACTTGAAAGTCACTG  150

seq1  TACTGTATGCATCCTGTACATTGAGTTTCCCTCACATCACTTCCAGAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTATGCATCCTGTACATTGAGTTTCCCTCACATCACTTCCAGAGTC  200

seq1  CTTCCAGGTACGCACACACCTCGTCTGTTCCATCTGCCAGATGTCTGCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGGTACGCACACACCTCGTCTGTTCCATCTGCCAGATGTCTGCGT  250

seq1  AACAGTCCACCAAAAATTTTCTCATTCCATTTCCAACAGGCAGTTCAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTCCACCAAAAATTTTCTCATTCCATTTCCAACAGGCAGTTCAGTT  300

seq1  CTAACATTTGGCTAGTCTAAATTAAGTCATGGTCAATTTCCTAGTGCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACATTTGGCTAGTCTAAATTAAGTCATGGTCAATTTCCTAGTGCCTC  350

seq1  ACCTCCTGAGCATAAATACTCATGAGAATTTCTAAGTATTTTCAAATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTGAGCATAAATACTCATGAGAATTTCTAAGTATTTTCAAATATT  400

seq1  ACAAGGAATGTTTTCCCACTCCCAAAGTCAACCTTGTATAAAGTATAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGAATGTTTTCCCACTCCCAAAGTCAACCTTGTATAAAGTATAGCA  450

seq1  TTTCTTTATTTCTGCTTTCAATACCCCCCATATATCTGACTTTTACTATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTTCTGCTTTCAATACCCCCCATATATCTGACTTTTACTATC  500

seq1  GGTTATAGTTTGTGGTGTGCAGGTTTCACCTCCAAACGTCGTCTTGGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATAGTTTGTGGTGTGCAGGTTTCACCTCCAAACGTCGTCTTGGTGT  550

seq1  TCAGCTGAAGCAAGTGTTTTCATGTTCTAAGTCCTGGTAAATGGACAGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTGAAGCAAGTGTTTTCATGTTCTAAGTCCTGGTAAATGGACAGTG  600

seq1  TCACTCTATAACGTCTGTCCTCGGTACCTGGACTAGTGACAACCCGCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTATAACGTCTGTCCTCGGTACCTGGACTAGTGACAACCCGCAGA  650

seq1  TCCACACTGACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTTGACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACACTGACAGCCGTCACAACAGGCCTGCCTGCCTGCCACTCTTGACC  700

seq1  GCAGACGACTGTGTTCACAGTTCAGCACTGCTCTGCTTTTCCACCGCTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACGACTGTGTTCACAGTTCAGCACTGCTCTGCTTTTCCACCGCTGC  750

seq1  ATTCGCTGATTGCAGGCCTGTATCATACACATGTCTTTCCCTTCATTGTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCGCTGATTGCAGGCCTGTATCATACACATGTCTTTCCCTTCATTGTG  800

seq1  AATTC  805
      |||||
seq2  AATTC  805