BAC Information

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BAC

Clone NameB6Ng01-253K21
Chromosome7 (Build37)
Map Location 86,826,122 - 86,948,352
singlet/doubletdoublet
Overlap gene5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1
Upstream geneMrpl46, Mrps11, Det1, Isg20l1, Isg20, Acan, Hapln3, Mfge8, Abhd2, Rlbp1, BC025462, Polg, AI854517, Rhcg
Downstream geneMesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm, Crtc3, Iqgap1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253K21.bB6Ng01-253K21.g
ACCGA060348GA060349
length3931,131
definitionB6Ng01-253K21.b B6Ng01-253K21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(86,947,954 - 86,948,352)(86,826,122 - 86,827,260)
sequence
agttcccagcacctgcaattggctcacaaccatctgtgccttccgtttgt
aacttcagttttgacagttgtaagctaacttctggggtctgggagctgaa
tcaaggtcctctctaagagtagtaagtggtcctaatgttacactccagcc
catcctcttgcctccagctgccttatgaaagaatcagtggcctgaccctg
atggtcatgagaggggtgtgtgcaagagctgggtagatggctgctttggc
ccctgacaagtccacagagtagactcgtgggtctggagtctctgagcttc
ccctagagaagaggcccagagccagagagaggacactaggtagtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgcggtg
gaattccatctcctactcccacctcataaatattgagatttagatgtgtt
ttcaccattcccagtttatctagttgtgggaattaaaagcagggctggcg
ggcctcaggcattctaggcaagcactttaccaactgagctgcatccccat
tccccctacctgtgccctgcttgcttgctttctttctttctttctttctt
tctttctttctttctttctttcttttggtttttcaagacagggtttctct
gtatagccctggctgtcctggaactcactctgtagaccagactggcctca
aactcagaaatccgcctgcctctgcctcccgagggctgggattaaaggcg
tgtgccaccacttcccggcttattttttatttttttccctctctttttca
gtactggagattgaatccagggctttctatatgtgaggcatatgctttag
ccctgagctacatttccagttcttgggcattgtttctacatgaatcaata
gctctttgctctaagaaagagtttcactaaatagcatgcaaaggagatgt
gacctggtactttgtttcctccaggtgccagcttcaggtatttcttcgtc
tggagatgtgtgagcagtgcccctcagtcctggaccgcccagatgaggtg
gagcgcatagtggaggaggtaagccatggctgccaccccgagcatgctct
cattctctcagcttcccagcagagcctgtggcaactttttgcaatctctt
tcaggtgacagatttgctgcgtctggtgtgtctcactaaaggactcagcg
tacctgtcagagtttctggaggagatcttgagattgtaagttcaatgagt
actggctcagtttaaaaaaattttgttgttgttgctgttgtttgtttttg
tttttttttacaaccactacacatggtgttatcttagaattataaggtta
aagggtattttttcatgctggtaacttcagttctatgtctaaccaatata
ttcatcacaggtatattggctccatccccgggacatgggacaactctacc
acaggctggggttaaaattcctcagaaggctggctgggagtctctacagg
attttcagtggatgatctatgtctcagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_86947954_86948352
seq2: B6Ng01-253K21.b_39_437 (reverse)

seq1  CACCACACCACACACACACACACACACACACACACACACACACACACACA  50
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGCACCACACACACACACACACACACACACACACACACACACACACA  50

seq1  CTACCTAGTGTCCTCTCTCTGGCTCTGGGCCTCTTCTCTAGGGGAAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTAGTGTCCTCTCTCTGGCTCTGGGCCTCTTCTCTAGGGGAAGCTC  100

seq1  AGAGACTCCAGACCCACGAGTCTACTCTGTGGACTTGTCAGGGGCCAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTCCAGACCCACGAGTCTACTCTGTGGACTTGTCAGGGGCCAAAG  150

seq1  CAGCCATCTACCCAGCTCTTGCACACACCCCTCTCATGACCATCAGGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCATCTACCCAGCTCTTGCACACACCCCTCTCATGACCATCAGGGTC  200

seq1  AGGCCACTGATTCTTTCATAAGGCAGCTGGAGGCAAGAGGATGGGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCACTGATTCTTTCATAAGGCAGCTGGAGGCAAGAGGATGGGCTGGA  250

seq1  GTGTAACATTAGGACCACTTACTACTCTTAGAGAGGACCTTGATTCAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAACATTAGGACCACTTACTACTCTTAGAGAGGACCTTGATTCAGCT  300

seq1  CCCAGACCCCAGAAGTTAGCTTACAACTGTCAAAACTGAAGTTACAAACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGACCCCAGAAGTTAGCTTACAACTGTCAAAACTGAAGTTACAAACG  350

seq1  GAAGGCACAGATGGTTGTGAGCCAATTGCAGGTGCTGGGAACTGAATTC  399
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACAGATGGTTGTGAGCCAATTGCAGGTGCTGGGAACTGAATTC  399

seq1: chr7_86826122_86827260
seq2: B6Ng01-253K21.g_66_1196

seq1  GAATTCCATCTCCTACTCCCACCTCATAAATATTGAGATTTAGATGTGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTCCTACTCCCACCTCATAAATATTGAGATTTAGATGTGTT  50

seq1  TTCACCATTCCCAGTTTATCTAGTTGTGGGAATTAAAAGCAGGGCTGGCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCATTCCCAGTTTATCTAGTTGTGGGAATTAAAAGCAGGGCTGGCG  100

seq1  GGCCTCAGGCATTCTAGGCAAGCACTTTACCAACTGAGCTGCATCCCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCAGGCATTCTAGGCAAGCACTTTACCAACTGAGCTGCATCCCCAT  150

seq1  TCCCCCTACCTGTGCCCTGCTTGCTTGCTTTCTTTCTTTCTTTCTTTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTACCTGTGCCCTGCTTGCTTGCTTTCTTTCTTTCTTTCTTTCTT  200

seq1  TCTTTCTTTCTTTCTTTCTTTCTTTTGGTTTTTCAAGACAGGGTTTCTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTTTCTTTCTTTCTTTCTTTTGGTTTTTCAAGACAGGGTTTCTCT  250

seq1  GTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGACTGGCCTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAGCCCTGGCTGTCCTGGAACTCACTCTGTAGACCAGACTGGCCTCA  300

seq1  AACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGGGCTGGGATTAAAGGCG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGGGCTGGGATTAAAGGCG  350

seq1  TGTGCCACCACTTCCCGGCTTATTTTTTATTTTTTTCCCTCTCTTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCACCACTTCCCGGCTTATTTTTTATTTTTTTCCCTCTCTTTTTCA  400

seq1  GTACTGGAGATTGAATCCAGGGCTTTCTATATGTGAGGCATATGCTTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGGAGATTGAATCCAGGGCTTTCTATATGTGAGGCATATGCTTTAG  450

seq1  CCCTGAGCTACATTTCCAGTTCTTGGGCATTGTTTCTACATGAATCAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCTACATTTCCAGTTCTTGGGCATTGTTTCTACATGAATCAATA  500

seq1  GCTCTTTGCTCTAAGAAAGAGTTTCACTAAATAGCATGCAAAGGAGATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTTGCTCTAAGAAAGAGTTTCACTAAATAGCATGCAAAGGAGATGT  550

seq1  GACCTGGTACTTTGTTTCCTCCAGGTGCCAGCTTCAGGTATTTCTTCGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGTACTTTGTTTCCTCCAGGTGCCAGCTTCAGGTATTTCTTCGTC  600

seq1  TGGAGATGTGTGAGCAGTGCCCCTCAGTCCTGGACCGCCCAGATGAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGATGTGTGAGCAGTGCCCCTCAGTCCTGGACCGCCCAGATGAGGTG  650

seq1  GAGCGCATAGTGGAGGAGGTAAGCCATGGCTGCCACCCCGAGCATGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCGCATAGTGGAGGAGGTAAGCCATGGCTGCCACCCCGAGCATGCTCT  700

seq1  CATTCTCTCAGCTTCCCAGCAGAGCCTGTGGCAACTTTTTGCAATCTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTCAGCTTCCCAGCAGAGCCTGTGGCAACTTTTTGCAATCTCTT  750

seq1  TCAGGTGACAGATTTGCTGCGTCTGGTGTGTCTCACT-AAGGACTCAGCG  799
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCAGGTGACAGATTTGCTGCGTCTGGTGTGTCTCACTAAAGGACTCAGCG  800

seq1  TACCTGTCAGAGTTTCTGGAGGAGATCTTGAGATTGTAAGTTCAATGAGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGTCAGAGTTTCTGGAGGAGATCTTGAGATTGTAAGTTCAATGAGT  850

seq1  ACTGGCTCAGTTTAAAAAAATTTTGTTGTTGTTGCTGTTGTTTGTTTTTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTCAGTTTAAAAAAATTTTGTTGTTGTTGCTGTTGTTTGTTTTTG  900

seq1  TTTTTTTTTAACAACCACTACACATGGTGTTATCTTAGAATTATAAGGTT  949
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTT-ACAACCACTACACATGGTGTTATCTTAGAATTATAAGGTT  949

seq1  AAAAGGGTATTTTTTCATGCTGGTAACTTCAGTTCTATGTCTAACCAATA  999
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -AAAGGGTATTTTTTCATGCTGGTAACTTCAGTTCTATGTCTAACCAATA  998

seq1  TATTCATTCCACAGGTATATTGGCTCCATCCCCGGGACAATTGGACAACT  1049
      |||||||  ||||||||||||||||||||||||||||| || ||||||||
seq2  TATTCAT--CACAGGTATATTGGCTCCATCCCCGGGAC-ATGGGACAACT  1045

seq1  CTACCACAGCCTGGGGTTAAAAATTCCTCAGAA-GCTGGCT-GGAGTCCT  1097
      ||||||||| |||||||| |||||||||||||| ||||||| ||||||  
seq2  CTACCACAGGCTGGGGTT-AAAATTCCTCAGAAGGCTGGCTGGGAGTC--  1092

seq1  TCCTACAGGGTTTTTCAGT-GATGATTCTATGTCTCAAGAGAG  1139
        ||||| || |||||||| ||||| |||||||||| ||||||
seq2  -TCTACA-GGATTTTCAGTGGATGA-TCTATGTCTC-AGAGAG  1131