BAC Information

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BAC

Clone NameB6Ng01-254F08
Chromosome7 (Build37)
Map Location 96,292,049 - 96,292,935
singlet/doubletsinglet
Overlap geneTmem135
Upstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
Downstream geneLOC100039969, Fzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254F08.bB6Ng01-254F08.g
ACCGA060824GA060825
length1,218909
definitionB6Ng01-254F08.b B6Ng01-254F08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagtaagaatgttacctattcagtaacattcagacttgcctctag
tattgtaagagagatagtgagagaaatcaggcattactatttactacata
gagttagaaatctcagggcaagcttagcaaagcaagtttagaattcttat
tatagttatgcatggcagattacattacttaatagtagaaagtccccaca
cacaatcacttagaatgaaaaccgagccactcacatatacaggaatgtac
aattgtttaggaagtaaattgggctgtgatttgaggaggaactagaatat
tgtattattcccaagaaggttagctaaagcagaactccttaattagaact
atggcttgggtgtgaaagcccttgccctggcagtgtaaagacctcacacc
tggattctaagaatatggctgaccttagagctgactttgtctcagttgtt
ttattgtccagttcttgccagtctttatatttgcattcctctgttttgtg
taagaatcattaagcatccagtaacctcattgtaccttgccaatgtgtca
cctaacttccttattttcttctgtattaaaagtttgatgctcgatttgac
aaattacattcagatacacactctctctgtgtccgtgtctgtttgcttgc
ctgtaaccactggaacctaagtttcacctgtggatcaaggacccaagtga
ggtccatctgcagcagtgcatcatctctaaatgaacacagacctggcagt
cctctactgtatgtgtattgggggcctcatatcagctggtatatgctgtc
tgtttggtgatccagtgtttgagagatctcaagggtccagattaattgag
actgctagtcctcctacagaatcgccattctaaagcttcttttcagcctt
ccctaattcaaaaactgggggtcagcttgctttctgtcatttggtttggg
tgcaaataactgccatctgccttctttgaagctgcttgttgggtctttag
gaagggcagtctttgatagatgcctttttttgtgagcactacatagcctt
cagtataatggtcaggtcttggaacctccacttgagctctgaatcccacc
ttgaagtcctgttactggacctttctttttcttcaggcctcatctccaat
ttttcaaccggtaatttcctttctggacagaaaccatttattgattcaga
gaaaaagtgttgtctgtg
gaattcctagccctgtgttgcagggagagcacctgatgcagtccttgctt
gctggggaaagctactgtatatgcaggggtgcggtgccctctgagacact
gcagcactcccggggaaagctaccgtatatgcaggggtgcagtgccctct
gagacactgcagcactcctgggaagggggggataagtgaggatctctctg
ttatctttttttctgtctctgtgttaatgaccattgattgctgagtttgg
cgtaggaggagcttttacttgcttttccccacagtgaaggtgtcagcttg
aagctcagtaaagtcaaattatcagctcgctaacggccattcatgcttcc
tgataaagatggctattcactgattatcatctcaaaagcaacatgtctac
ttgaaagcatattgacaaagatagattcttgagagtgacttaaacataaa
agcaattttttatcactacagttttaaaaatgcagcaaacaacaaaaata
gagataagaactactatattgcttaagagtacagtgttgatatttactaa
aataactgtctaatttgaacaatctcaggctgttatggaagtttcagaac
ttgcgaccatcttactggaagttccttttaaggctcaccaagggcaggta
tgtgaccaagttgattttaaatgtttataacaaatttaataactttctat
aaggattttataaaatatttttgttccccttgagggaatgttcttttcag
tgggtaaattagtttattctatatgtaaatcaatatgttcaaacatagta
aagaaaaaaatcagatcttgagtttaaaaactaaatatttgactcctttg
cctttataatagttaatacatttttaaatatttttagattaattgtgctc
acctgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_96292049_96292935
seq2: B6Ng01-254F08.g_70_977 (reverse)

seq1  TAGCAGGTGAGCAC-ATTAATCT-AGAATATTT-AAAATGTCTAAACTAT  47
      |||||||||||||| |||||||| | ||||||| ||||||| | ||||||
seq2  TAGCAGGTGAGCACAATTAATCTAAAAATATTTAAAAATGTATTAACTAT  50

seq1  TAT-AAGGCAAAGGAGTCAAATATTTAGTTTT--AACTC-AGATCTGATT  93
      ||| ||||||||||||||||||||||||||||  ||||| ||||||||||
seq2  TATAAAGGCAAAGGAGTCAAATATTTAGTTTTTAAACTCAAGATCTGATT  100

seq1  TTTTTC-TTACTATG-TTGAACATATTGATTTACATATA-AAT-AACTAA  139
      |||||| |||||||| ||||||||||||||||||||||| ||| ||||||
seq2  TTTTTCTTTACTATGTTTGAACATATTGATTTACATATAGAATAAACTAA  150

seq1  TTTA-CCACTG-AAAGAACATTCCCTCA--GGGGACAAAAATA-TTTATA  184
      |||| |||||| ||||||||||||||||  ||| ||||||||| ||||||
seq2  TTTACCCACTGAAAAGAACATTCCCTCAAGGGGAACAAAAATATTTTATA  200

seq1  AAATCCTTATAG-AAGTTATT-AATTTGTTATAAACA-TTAAAATCAACT  231
      |||||||||||| |||||||| ||||||||||||||| ||||||||||||
seq2  AAATCCTTATAGAAAGTTATTAAATTTGTTATAAACATTTAAAATCAACT  250

seq1  TGGTCACATACCTGCCCTTGGTGAGCCTTAAAAGGAACTTCCAGTAAGAT  281
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACATACCTGCCCTTGGTGAGCCTTAAAAGGAACTTCCAGTAAGAT  300

seq1  GGTCGCAAGTTCTG-AACTTCCATAACAGCCTGAGATTGTTC-AATTAGA  329
      |||||||||||||| ||||||||||||||||||||||||||| |||||||
seq2  GGTCGCAAGTTCTGAAACTTCCATAACAGCCTGAGATTGTTCAAATTAGA  350

seq1  CAGTTATTTTAGTAAATATCAACACTGTACTCTTAAGCAATATAGTAGTT  379
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATTTTAGTAAATATCAACACTGTACTCTTAAGCAATATAGTAGTT  400

seq1  CTTATCTCTATTTTTGTTGTTTGCTGCATTTTTAAAACTGTAGTGATAAA  429
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATCTCTATTTTTGTTGTTTGCTGCATTTTTAAAACTGTAGTGATAAA  450

seq1  AAATTGCTTTTATGTTTAAGTCACTCTCAAGAATCTATCTTTGTCAATAT  479
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTTTTATGTTTAAGTCACTCTCAAGAATCTATCTTTGTCAATAT  500

seq1  GCTTTCAAGTAGACATGTTGCTTTTGAGATGATAATCAGTGAATAGCCAT  529
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCAAGTAGACATGTTGCTTTTGAGATGATAATCAGTGAATAGCCAT  550

seq1  CTTTATCAGGAAGCATGAATGGCCGTTAGCGAGCTGATAATTTGACTTTA  579
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATCAGGAAGCATGAATGGCCGTTAGCGAGCTGATAATTTGACTTTA  600

seq1  CTGAGCTTCAAGCTGACACCTTCACTGTGGGGAAAAGCAAGTAAAAGCTC  629
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTTCAAGCTGACACCTTCACTGTGGGGAAAAGCAAGTAAAAGCTC  650

seq1  CTCCTACGCCAAACTCAGCAATCAATGGTCATTAACACAGAGACAGAAAA  679
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTACGCCAAACTCAGCAATCAATGGTCATTAACACAGAGACAGAAAA  700

seq1  AAAGATAACAGAGAGATCCTCACTTATCCCCCCCTTCCCAGGAGTGCTGC  729
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAACAGAGAGATCCTCACTTATCCCCCCCTTCCCAGGAGTGCTGC  750

seq1  AGTGTCTCAGAGGGCACTGCACCCCTGCATATACGGTAGCTTTCCCCGGG  779
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCTCAGAGGGCACTGCACCCCTGCATATACGGTAGCTTTCCCCGGG  800

seq1  AGTGCTGCAGTGTCTCAGAGGGCACCGCACCCCTGCATATACAGTAGCTT  829
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTGCAGTGTCTCAGAGGGCACCGCACCCCTGCATATACAGTAGCTT  850

seq1  TCCCCAGCAAGCAAGGACTGCATCAGGTGCTCTCCCTGCAACACAGGGCT  879
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAGCAAGCAAGGACTGCATCAGGTGCTCTCCCTGCAACACAGGGCT  900

seq1  AGGAATTC  887
      ||||||||
seq2  AGGAATTC  908