BAC Information

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BAC

Clone NameB6Ng01-254L07
Chromosome7 (Build37)
Map Location 109,924,265 - 109,925,433
singlet/doubletsinglet
Overlap genenone
Upstream geneClpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561
Downstream geneOlfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254L07.bB6Ng01-254L07.g
ACCGA061103GA061104
length1,1851,184
definitionB6Ng01-254L07.b B6Ng01-254L07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagagggtggactccagaaaatcaaataacccccttaaaagatg
ggctcagagctgaacaaagaattttcacccgaggaataccgaaaggctga
gaaacacctgaaaaaatgttcaacatccttaatcatcagagaaatgcaaa
tcaaaacaaccctgagattccatctcacaccagtcagaatggctaagatc
aaaaattcaggtgacagcagatgctggcgtggatgtggagaaagaggaac
actcctccattgttggtgggattgcaggcttgtacaaccactctggaaat
cagtctggcggttcctcagaaaattggacatagtactaccggaggatcca
gcaatacctctcctgggcatataaccagaagatgtccgaaccagtaagaa
ggacacatgctccactatgttcatagcagccttatttataatagccagaa
gctggaaagaacccagatgcccctcaactgaggaatggatacagaaaatg
tggtatatctacacaatggattactactcagctattaaaaagaatgaatt
tatgaaattcctagccaaatggatggacctggagggcatcatcctgagtg
aggtaacacattcacaaaaaaactcacacaatatgtactcactgataagt
ggatattagcccaaaacctaagatacccaagatataagatacaatttgct
aaacacatgaaactcaagaagaatgaagactgaagtgtggacactatgcc
cctccttagaattgggaacaaaacacccatggaaggagttacagagtcaa
agtttggagctgagatgaaaggatggaccatgtagagactgccatatcca
gggatccaacccataatcagcttccaaacgctgacaccattgcatacact
agcaagattttattgaaaggacccagatgtagctgtctcttgtgagacta
tgccggggccctagcaaacacagaagtggatgctcacagtcagctaatgg
aatggatcacagggctcccaatggaggagctagagaagtagccaggagct
aaagggatctgcaaccctatagttgaacacattattgaactaccagtacc
cgagctctgactctagcctgcatacacatatcaaaagatgcttagttcgc
ttcacctgaaagaagaagcccattggaactgtgca
gaattcagaaaacctccatgaggctaacaaaatctttttattcttatgag
aaacagcagaggtaaagtctattgcttccttgaatgtagcagctgtactt
acaagtacccagatgttcttttgtggctttctctcagagcaggctgagga
gctgaggtcttctgcacagggatacagaacatttatggggagagctatcc
taggctttctgaaacctcttcatcagaaaaccccaggtggagatgatgtg
gaccacagaggatgaggctcccatgggctcattctactttatggtttcct
tcccctcagcctcatcgttagctccttcagtttccatgaagaaacggtct
tacttgcagtgtcagagaaccctcctataaaagcacatttgtaaaagtcc
cctccgcatctatgttggaatgcaatgctgagtgtcttgatcttgtgtag
atcccatgcaaggaaacatagagactttgagtccattgccctatgtgacc
tttaaaaagatgtttctgttattattgctctatagacagccaaatagtct
ttattaatttttttcaaaaagcattttaaggatttaacatattccagagt
tttgcattatattgatacagaaaacagaatataggcttttttttcatcaa
gaactagatgtacaaatcagtgctttatcacaaattctttgttttcattg
attatctctaattaagactgtctggaacaagatgagtcttcaatatatgt
actcagtgcataatgataaaattagtatagttagcattttcatgtcctat
atatatttttaattttcatattaagctggaataattgtatgattatgtga
cagaacttttagggttcagtgtatgactgcattgtgtgatcatcaaatca
ggggacaatttttcttatgagtacattttagacaatacatttgctagggt
cttgcattgacaaagagattctcaaagctttccttagaagaactaggaaa
gtgctctcatttcaatcacattttcctccatcttattcttaggtgattct
acttattaacatcttattcaactatggtataagttaattgctattacttt
catttgaaggtaccaattgttaattaccaattactgaaaccatatttaag
tcctttattattgagacatcaataggttattaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109924265_109925433
seq2: B6Ng01-254L07.g_70_1253 (reverse)

seq1  GTTATATAA-CTATTAATGTCTCATATAATAAAGACCCTAAAATAT-GTT  48
      |||| |||| ||||| |||||||| |||||||||   || |||||| |||
seq2  GTTA-ATAACCTATTGATGTCTCA-ATAATAAAG-GACTTAAATATGGTT  47

seq1  TCAGTAATTGTATAATTTACA--TAGTACCTTTAAAATGAAAATTAATAC  96
      ||||||||||  ||||| |||  | ||||| || ||||| ||| ||||| 
seq2  TCAGTAATTG-GTAATTAACAATTGGTACC-TTCAAATG-AAAGTAATAG  94

seq1  CAATTAAC-TATA-CATAGTTGAATAAGATG-TAAT-AGTAGAATCACTA  142
      |||||||| |||| ||||||||||||||||| |||| |||||||||||  
seq2  CAATTAACTTATACCATAGTTGAATAAGATGTTAATAAGTAGAATCACCT  144

seq1  AAGAAT-AGATG--AGAAAATGTGATTGAAAT--GAGCACTTTCCTAGTT  187
      |||||| |||||   |||||||||||||||||  ||||||||||||||||
seq2  AAGAATAAGATGGAGGAAAATGTGATTGAAATGAGAGCACTTTCCTAGTT  194

seq1  C-TCTAAGG-AAGCTTTGAG-ATCTCTTTGTCAAATGCAAGA-CCTAGC-  232
      | ||||||| |||||||||| ||||||||||| ||||||||| |||||| 
seq2  CTTCTAAGGAAAGCTTTGAGAATCTCTTTGTC-AATGCAAGACCCTAGCA  243

seq1  AATGTATTGTCTAAAATGTACTCATA--GAAAATTGTCCCCTGATTTGAT  280
      ||||||||||||||||||||||||||   |||||||||||||||||||||
seq2  AATGTATTGTCTAAAATGTACTCATAAGAAAAATTGTCCCCTGATTTGAT  293

seq1  GATCACACAATGCAGTCATACACTGAACC--TAAAGTTCTGTCACATAAT  328
      |||||||||||||||||||||||||||||   ||||||||||||||||||
seq2  GATCACACAATGCAGTCATACACTGAACCCTAAAAGTTCTGTCACATAAT  343

seq1  CATACAATTATTCCAGCTTAATATGAAAATTAAAAATATATATAGGACAT  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAATTATTCCAGCTTAATATGAAAATTAAAAATATATATAGGACAT  393

seq1  GAAAATGCTAACTATACTAATTTTATCATTATGCACTGAGTACATATATT  428
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATGCTAACTATACTAATTTTATCATTATGCACTGAGTACATATATT  443

seq1  GAAGACTCATCTTGTTCCAGACAGTCTTAATTAGAGATAATCAATGAAAA  478
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACTCATCTTGTTCCAGACAGTCTTAATTAGAGATAATCAATGAAAA  493

seq1  CAAAGAATTTGTGATAAAGCACTGATTTGTACATCTAGTTCTTGATGAAA  528
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATTTGTGATAAAGCACTGATTTGTACATCTAGTTCTTGATGAAA  543

seq1  AAAAAGCCTATATTCTGTTTTCTGTATCAATATAATGCAAAACTCTGGAA  578
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCTATATTCTGTTTTCTGTATCAATATAATGCAAAACTCTGGAA  593

seq1  TATGTTAAATCCTTAAAATGCTTTTTGAAAAAAATTAATAAAGACTATTT  628
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTAAATCCTTAAAATGCTTTTTGAAAAAAATTAATAAAGACTATTT  643

seq1  GGCTGTCTATAGAGCAATAATAACAGAAACATCTTTTTAAAGGTCACATA  678
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCTATAGAGCAATAATAACAGAAACATCTTTTTAAAGGTCACATA  693

seq1  GGGCAATGGACTCAAAGTCTCTATGTTTCCTTGCATGGGATCTACACAAG  728
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGGACTCAAAGTCTCTATGTTTCCTTGCATGGGATCTACACAAG  743

seq1  ATCAAGACACTCAGCATTGCATTCCAACATAGATGCGGAGGGGACTTTTA  778
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGACACTCAGCATTGCATTCCAACATAGATGCGGAGGGGACTTTTA  793

seq1  CAAATGTGCTTTTATAGGAGGGTTCTCTGACACTGCAAGTAAGACCGTTT  828
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGTGCTTTTATAGGAGGGTTCTCTGACACTGCAAGTAAGACCGTTT  843

seq1  CTTCATGGAAACTGAAGGAGCTAACGATGAGGCTGAGGGGAAGGAAACCA  878
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATGGAAACTGAAGGAGCTAACGATGAGGCTGAGGGGAAGGAAACCA  893

seq1  TAAAGTAGAATGAGCCCATGGGAGCCTCATCCTCTGTGGTCCACATCATC  928
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAGAATGAGCCCATGGGAGCCTCATCCTCTGTGGTCCACATCATC  943

seq1  TCCACCTGGGGTTTTCTGATGAAGAGGTTTCAGAAAGCCTAGGATAGCTC  978
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTGGGGTTTTCTGATGAAGAGGTTTCAGAAAGCCTAGGATAGCTC  993

seq1  TCCCCATAAATGTTCTGTATCCCTGTGCAGAAGACCTCAGCTCCTCAGCC  1028
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATAAATGTTCTGTATCCCTGTGCAGAAGACCTCAGCTCCTCAGCC  1043

seq1  TGCTCTGAGAGAAAGCCACAAAAGAACATCTGGGTACTTGTAAGTACAGC  1078
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTGAGAGAAAGCCACAAAAGAACATCTGGGTACTTGTAAGTACAGC  1093

seq1  TGCTACATTCAAGGAAGCAATAGACTTTACCTCTGCTGTTTCTCATAAGA  1128
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTACATTCAAGGAAGCAATAGACTTTACCTCTGCTGTTTCTCATAAGA  1143

seq1  ATAAAAAGATTTTGTTAGCCTCATGGAGGTTTTCTGAATTC  1169
      |||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGATTTTGTTAGCCTCATGGAGGTTTTCTGAATTC  1184