MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-255N01
Chromosome	7 (Build37)
Map Location	140,443,390 - 140,620,952
singlet/doublet	doublet
Overlap gene	LOC668747
Upstream gene	4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2
Downstream gene	4930404H21Rik, LOC100043237, 2700050L05Rik, Mmp21, Uros, Bccip, Dhx32, LOC100043695, Fank1, Adam12, A130023I24Rik, 4933400E14Rik, LOC100043248
Link	Open Mouse BAC browser

Click to get alignment info.

name	4631426J05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77590 MGI:1924840
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043682 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	LOC100043683 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins pseudo : _no_value

name	Oat (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18242 MGI:97394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx1-2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20231 MGI:104806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310007H09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76429 MGI:1923679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930008G19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77938 MGI:1925188
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	2010208K18Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72096 MGI:1919346
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	C430003P19Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109359 MGI:1926116
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Zranb1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:360216 MGI:106441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ctbp2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13017 MGI:1201686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668747 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668747
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	4930404H21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73808 MGI:1921058
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043237 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	2700050L05Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214764 MGI:1919831
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Mmp21 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214766 MGI:2664387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Uros (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22276 MGI:98917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bccip (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66165 MGI:1913415
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dhx32 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:101437 MGI:2141813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043695 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1194 ESTs, 6 Proteins

name	Fank1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66930 MGI:1914180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adam12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11489 MGI:105378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A130023I24Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320569 MGI:2444285
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933400E14Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71007 MGI:1918257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043248 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs

name	4631426J05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801162 GeneID:77590 MGI:1924840
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4631426J05 gene transcript_id : NM_029935.3

name	LOC100043682 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257811 GeneID:100043682
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : hypothetical protein LOC100043682 transcript_id : XM_001480735.1

name	Oat (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134032004 GeneID:18242 MGI:97394
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ornithine aminotransferase transcript_id : NM_016978.2

name	Nkx1-2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982826 GeneID:20231 MGI:104806
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK1 transcription factor related, locus 2 (Drosophila) transcript_id : NM_009123.2

name	2310007H09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70778743 GeneID:76429 MGI:1923679
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2310007H09 gene transcript_id : NM_029609.1

name	A930008G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059501 GeneID:77938 MGI:1925188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930008G19 gene transcript_id : NM_212473.1

name	A930008G19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059505 GeneID:77938 MGI:1925188
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930008G19 gene transcript_id : NM_175268.4

name	2010208K18Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:47059503 GeneID:72096 MGI:1919346
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2010208K18 gene transcript_id : NM_028095.1

name	C430003P19Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:37574118 GeneID:109359 MGI:1926116
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C430003P19 gene transcript_id : NM_198017.1

name	Zranb1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46409651 GeneID:360216 MGI:106441
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger, RAN-binding domain containing 1 transcript_id : NM_207302.1

name	Ctbp2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:144922610 GeneID:13017 MGI:1201686
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : C-terminal binding protein 2 transcript_id : NM_009980.4

name	4930404H21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:115749425 GeneID:73808 MGI:1921058
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930404H21 gene transcript_id : NM_028654.1

name	LOC100043237 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257734 GeneID:100043237
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : hypothetical protein LOC100043237 transcript_id : XM_001479801.1

name	2700050L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54261742 GeneID:214764 MGI:1919831
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700050L05 gene transcript_id : NM_178115.3

name	2700050L05Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122450 GeneID:214764 MGI:1919831
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2700050L05 gene transcript_id : NM_145995.1

name	Mmp21 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23308682 GeneID:214766 MGI:2664387
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : matrix metallopeptidase 21 transcript_id : NM_152944.1

name	Uros (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83921610 GeneID:22276 MGI:98917
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : uroporphyrinogen III synthase transcript_id : NM_009479.2

name	Bccip (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:134031956 GeneID:66165 MGI:1913415
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BRCA2 and CDKN1A interacting protein transcript_id : NM_025392.2

name	Dhx32 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114326536 GeneID:101437 MGI:2141813
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DEAH (Asp-Glu-Ala-His) box polypeptide 32 transcript_id : NM_133941.2

name	LOC100043695 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257814 GeneID:100043695
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 11 mRNAs, 1194 ESTs, 6 Proteins product : similar to ribosomal protein S13 transcript_id : XM_001480802.1

name	Fank1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31982667 GeneID:66930 MGI:1914180
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin type 3 and ankyrin repeat domains 1 transcript_id : NM_025850.2

name	Adam12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117606340 GeneID:11489 MGI:105378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : a disintegrin and metallopeptidase domain 12 (meltrin alpha) transcript_id : NM_007400.2

name	A130023I24Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31343033 GeneID:320569 MGI:2444285
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A130023I24 gene transcript_id : NM_177194.2

name	4933400E14Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486742 GeneID:71007 MGI:1918257
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933400E14 gene transcript_id : NM_001081331.1

name	LOC100043248 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149257736 GeneID:100043248
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs product : similar to chromosome 10 open reading frame 90 transcript_id : XM_001479821.1

name	4631426J05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560040 CCDS:CCDS21922.1 GeneID:77590 MGI:1924840
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0050656 - 3'-phosphoadenosine 5'-phosphosulfate binding [Evidence ISS]; GO:0050659 - N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0019319 - hexose biosynthesis [Evidence ISS] codon_start : 1 note : GalNAc4S-6ST; GalNAc 4-sulfate 6-O-sulfotransferase product : N-acetylgalactosamine 4-sulfate 6-O-sulfotransferase protein_id : NP_084211.2

name	LOC100043682 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257812 GeneID:100043682
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480785.1

name	Oat (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:8393866 CCDS:CCDS21923.1 GeneID:18242 MGI:97394
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0004587 - ornithine-oxo-acid transaminase activity [Evidence IEA]; GO:0030170 - pyridoxal phosphate binding [Evidence IEA]; GO:0008483 - transaminase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : ornithine aminotransferase protein_id : NP_058674.1

name	Nkx1-2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6677853 CCDS:CCDS21924.1 GeneID:20231 MGI:104806
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : spinal cord axial homeobox gene 1 product : NK1 transcription factor related, locus 2 protein_id : NP_033149.1

name	2310007H09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70778744 CCDS:CCDS21925.1 GeneID:76429 MGI:1923679
definition	GO_function : GO:0016787 - hydrolase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC76429 protein_id : NP_083885.1

name	A930008G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542068 CCDS:CCDS21926.1 GeneID:77938 MGI:1925188
definition	codon_start : 1 product : hypothetical protein LOC77938 protein_id : NP_780477.2

name	A930008G19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059502 CCDS:CCDS21926.1 GeneID:77938 MGI:1925188
definition	codon_start : 1 product : hypothetical protein LOC77938 protein_id : NP_997638.1

name	2010208K18Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:47059504 CCDS:CCDS21927.1 GeneID:72096 MGI:1919346
definition	GO_function : GO:0008168 - methyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC72096 protein_id : NP_082371.1

name	C430003P19Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:37574119 CCDS:CCDS21928.1 GeneID:109359 MGI:1926116
definition	codon_start : 1 product : hypothetical protein LOC109359 protein_id : NP_932134.1

name	Zranb1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46409652 CCDS:CCDS21929.1 GeneID:360216 MGI:106441
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 function : putative cysteine-peptidase product : TRAF-binding protein protein_id : NP_997185.1

name	Ctbp2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753548 CCDS:CCDS21930.1 GeneID:13017 MGI:1201686
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0051287 - NAD binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016616 - oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IDA]; GO:0003714 - transcription corepressor activity [Evidence IPI] [Evidence IDA] GO_process : GO:0006564 - L-serine biosynthesis [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA]; GO:0045892 - negative regulation of transcription, DNA-dependent [Evidence IPI] codon_start : 1 product : C-terminal binding protein 2 protein_id : NP_034110.1

name	4930404H21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:115749426 GeneID:73808 MGI:1921058
definition	codon_start : 1 product : hypothetical protein LOC73808 protein_id : NP_082930.1

name	LOC100043237 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257735 GeneID:100043237
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479851.1

name	2700050L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54261743 CCDS:CCDS21932.1 GeneID:214764 MGI:1919831
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC214764 isoform 2 protein_id : NP_835216.2

name	2700050L05Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122451 GeneID:214764 MGI:1919831
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC214764 isoform 1 protein_id : NP_666107.1

name	Mmp21 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23308683 CCDS:CCDS21933.1 GeneID:214766 MGI:2664387
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence ISS]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0000270 - peptidoglycan metabolism [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 product : matrix metalloproteinase 21 protein_id : NP_694423.1

name	Uros (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678519 CCDS:CCDS21934.1 GeneID:22276 MGI:98917
definition	GO_function : GO:0016829 - lyase activity [Evidence IEA]; GO:0004852 - uroporphyrinogen-III synthase activity [Evidence IDA] GO_process : GO:0006783 - heme biosynthesis [Evidence IEA]; GO:0006779 - porphyrin biosynthesis [Evidence IDA] codon_start : 1 note : URO-synthase; uroporphyrinogen-III synthase; hydroxymethylbilane hydrolyase (cyclizing) product : uroporphyrinogen III synthase protein_id : NP_033505.1

name	Bccip (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:134031957 CCDS:CCDS21935.1 GeneID:66165 MGI:1913415
definition	GO_component : GO:0019908 - nuclear cyclin-dependent protein kinase holoenzyme complex [Evidence ISS]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0019207 - kinase regulator activity [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0000079 - regulation of cyclin-dependent protein kinase activity [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 product : BRCA2 and CDKN1A interacting protein protein_id : NP_079668.2

name	Dhx32 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527160 CCDS:CCDS21936.1 GeneID:101437 MGI:2141813
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0004386 - helicase activity [Evidence IEA] GO_process : GO:0006810 - transport [Evidence IEA] codon_start : 1 note : DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 32 product : helicase DDX32 protein_id : NP_598702.1

name	LOC100043695 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257815 GeneID:100043695
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480852.1

name	Fank1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385328 CCDS:CCDS21937.1 GeneID:66930 MGI:1914180
definition	codon_start : 1 note : germ cell-specific 1 product : fibronectin type 3 and ankyrin repeat domains 1 protein_id : NP_080126.1

name	Adam12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117606341 CCDS:CCDS21938.1 GeneID:11489 MGI:105378
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0016787 - hydrolase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0004222 - metalloendopeptidase activity [Evidence IEA]; GO:0008237 - metallopeptidase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006508 - proteolysis [Evidence IEA] codon_start : 1 note : meltrin alpha; a disintegrin and metalloproteinase domain 12 (meltrin alpha) product : a disintegrin and metalloprotease domain 12 protein_id : NP_031426.2

name	A130023I24Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28893209 GeneID:320569 MGI:2444285
definition	codon_start : 1 product : hypothetical protein LOC320569 protein_id : NP_796168.1

name	4933400E14Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486743 GeneID:71007 MGI:1918257
definition	codon_start : 1 product : hypothetical protein LOC71007 protein_id : NP_001074800.1

name	LOC100043248 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149257737 GeneID:100043248
definition	codon_start : 1 product : similar to chromosome 10 open reading frame 90 protein_id : XP_001479871.1

name	LOC668747 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668747
definition	number : 2 pseudo : _no_value

name	LOC668747 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668747
definition	number : 1 pseudo : _no_value

name	LOC100043683 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149257813 GeneID:100043683
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs, 9 Proteins product : similar to high-mobility group box 1 pseudo : _no_value transcript_id : XR_034823.1

clone name	MSMg01-153M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453C21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-376B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-509E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-536O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-380O05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-274B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511B05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-547E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112N16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-485L17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-370P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467P14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-296G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-296G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494J08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-367D02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-381D21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095K21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335F05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-357C20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-113C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155F13
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-146I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-157A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-529P01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-391B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-183L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326G12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-358K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-272G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-346O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-061M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476O08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-400H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-322D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431B03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-181E23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120J22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295A11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-309D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-401D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-511K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-397E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-339F11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-535L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-458K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368G24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123I14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-231K23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-167P08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466C12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-356P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-538E06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-176P17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-206K08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-423A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169B15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080N24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303H24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207E06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-204P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205B01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283L20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153H07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-273D06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-005D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-343F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059B13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124D12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085H05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336F09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-211I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094I17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301J01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-301K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-270F18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-290L24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098F21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-243L23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-168L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-208P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-344H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-216B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-280L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-147H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325N10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-015C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341J24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-128I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-003I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331E03
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-255N01.b	B6Ng01-255N01.g
ACC	GA061930	GA061931
length	1,150	1,134
definition	B6Ng01-255N01.b	B6Ng01-255N01.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(140,619,804 - 140,620,952)	(140,443,390 - 140,444,529)
sequence	gaattctttgtggcacaatatatgaacatatgttttgaaatattgcatgg ttttaaatagaactattattttctgtgtattgaacacatactccccatct tgatatataccataattatatattatattatttaaatatttgtatcttta tttttctgtcacaatttttgttaaaactgctttctataacagtttttgca ttgcaacatataattataaacatttataactatcttattttatttacaag atcacttctctagaaaactcaaataccctcataccatcaatatttttcct gttggtctaactgtggcttagctccatgctgccactggcttttttcatgt taagattggactgcttttatgatttgatttgtagcaagaactcacattgt gctatttctcatcactcctgaagaccaggaaacaagttgtagacttaagt ctcattttcacaaatgtgttctaagttatttacaatctgtggctattgtg agcgaaaatgtttcttctattggactttctaattagttactatgtgtata gtaaattcattttgagtactgagttttctgtgttgaacacacctttgtag ccagccacattatcacggtaaacttttagtaacatttttcagttcattca tttactgtcatagtaagtctgtgtcaacttggcacaaacctaggtacatc tagaggaaagaaactcaattaaggagctacttcagttccaggcttccagc ttctttcttgagttcttgccttggcttcccttggtgatggctgacaactg tagaatgaatcaaaccctttctccccaagttgtttttgatcatgatgctt gtcactgcaacaaaaagccaaccaggacagatactgtttcagtcaaggat gatttgacttctcctcctaacctttaatttttacatttttttcttgtcat attgtactggctagcagtttagtaaaacagttgaaactgccttagggctt ctttgttttaacatttttaaaatgagtgtaatgcactgaatttgtcatgg aaaataagttctcagtgataaatgagtctactgagaataacctgcataaa ggtggttagaaaattcaccataaaagttcagttatttcagtatcaagaaa	gaattccttcacctccctccccacattacccccacaccctgctgaggtct tgtgtgtgtctctgtgtgtgcaaaaactttctttaatttgtgttgtcaga gtcctgatctgcatcttctaaaccccagttcacacgtggcctctaaaggg ccttccccaggggaatggttcacaccctcactgtgagtccgctgtgcact gatgaggtgggaggcatagccaggcagcctctaccggatcactcttagga tgtggtttagcttatgtgtgcaagattgaatgctatgtggcttacccagg aaaaggcatggttcccatttgtgtgaaacatggttgtgcaccataaggtc atcagggtccgaatcctttctttctggtgacttcccagtcccttgttcgt tcctgttacatgcatcataagattgctactaccatgcccttgctcttgcc agcaggagggacaaaggcaaaggaagttcctgcctttctcttcaaggata gaacttgatttggaaacttgatttagccttttagctgcaaaggagtccag gagatttagtctttagatccagacctcaggggtctagctaggcttgttta caatggaggagtatgagtagggccagtagggggattgtattcctttttaa cattgccttcagtcacagaaggtgccggctaaggtagctttctgcgcagg tctgctcacccatcaggtaacacggagcttagttcattttttagttcatt agttgtcctatcagggggaaccatggtgaatccatgtgttattcttccca tcacctgagaaagccagtgcttaggaacgttccttgctgttgccaagcta gtgagtgactgcaccagacactggcgagggtcaaacctctcaccataatc tctagcctaagactcgttggcaacggctacttacctggagctggtatctc aggacactaaactctgaaatcaaagtagtgtacggtatagttctattttc ctatgaatagaagtttttcttcataattgtatttatgaggttactgaaac ctccactgtaacaatacttgctcgtttggtagttccagaccagactaata tgagaattgatggaaagacaagactgctgctgac
quality values	Open. 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Hide. 62 38 30 35 62 62 62 62 62 59 18 39 38 34 28 34 34 34 32 32 49 59 46 62 59 62 59 62 62 62 62 62 59 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 56 46 35 31 35 56 54 62 62 62 62 62 62 62 62 62 62 62 54 49 49 54 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 59 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 49 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 59 59 59 59 59 62 62 62 62 62 59 62 62 62 62 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 49 62 62 54 49 54 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 49 49 62 62 62 62 62 62 62 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 46 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 62 62 62 62 62 62 62 49 62 62 62 58 58 58 58 54 58 58 58 58 45 45 58 58 53 54 58 58 58 58 58 54 58 58 58 58 58 58 52 58 58 58 58 58 52 58 58 58 58 58 58 49 34 42 42 58 54 54 58 58 58 58 58 58 54 52 58 51 54 54 47 54 58 46 58 58 58 53 35 58 58 58 51 54 51 51 51 58 51 50 49 58 51 58 58 58 52 58 58 49 49 35 58 51 58 58 58 39 58 58 40 58 50 46 58 58 51 58 51 50 58 51 39 46 32 58 53 50 16 58 58 58 58 53 36 58 54 50 52 54 46 50 51 40 58 58 58 37 42 41 48 42 58 50 52 46 58 53 51 50 42 49 49 53 50 52 40 40 58 47 29 58 32 52 40 44 39 46 50 50 42 53 25 58 38 52 39 54 58 58 52 53 53 33 31 40 53 45 32 54 40 52 51 52 42 47 45 29 41 32 49 35 53 53 33 9 49 40 54 40 44 37 49 40 54 33 23 49 51 40 40 23 36 37 37 34 53 54 54 54 54 31 33 39 40 42 37 34 47 45 53 34 53 33 42 33 33 51 32 42 40 45 24 5 49 54 49 40 37 53 32 32 18 31 53 53 32 41 42 32 33 31 34 31 32 41 37 42 53 32 33 45 45 32 37 35 30 47 45 19 31 39 29 33 33 18 29 37 21 46 51 43 14 12 19 18 30 31 30 27 35 13 21 13 42 31 41 29 13 9 20 31 30 35 31 31 34 38 43 31 31 29 22 36 22 37 28 31 32 36 31 31 41 26 29 30 33 30 31 26 31 28 14 22 27 31 29 37 20 21 30 31 31 34 19 23 35 25 46 22 10 20 32 46 31 32 32 32 34 35 25 24 20 37 22 29 23 14 28 31 36 34 31 25 10 18 12 19 29 31 15 35 24 34 31 22 27 22 22 29 25 32 21 8 5 16 17 18 21 44 9 24 18 19 21 10 13 25 8 11 31 35 19 30 25 31 30 27 34 26 9 25 14 18 17 8 17 32 28 43 21 22 32 21 29 27 34 48 34 27 25 20 48 37 25 13 31 7 17 29 7 7 17 25 13 5 10 27 32 12 30 18 34 22 27 17 28 32 20 16 25 12 18 13 16 21 18 8 6 12 13 12 7 22 30 28 28 12 6 8 9 18 6 11 4 5 6 20 13 4 7 15 24 7 4 3 5 3 9 7 30 25 7 8 7 9 16 30 11 13 6 6 10 24 12 28 10 18 12 28 17 8 18 13 7 6 7 8 8 16 11 6 6 5 4 14 14 14 6 14 20 10 9 8 4 3 1 3 9 4 5 2 1 3 7 6 13 8 8 11 4 4 8 5 7 6 6 3 6 7 6 5 4 17 30 8 5 4 4 16 11 5 22 2 2 2 2 2 6 17 13 4 2 3

Alignment Information

BAC End 1

BAC End 2

seq1: chr7_140619804_140620952
seq2: B6Ng01-255N01.b_44_1193 (reverse)

seq1  TTTCTTGATACTGAAATAAGTGAACTTTTTATGTGAA-TCTCT-ACCACC  48
      ||||||||||||||||||| |||||||||   ||||| | ||| ||||||
seq2  TTTCTTGATACTGAAATAACTGAACTTTTATGGTGAATTTTCTAACCACC  50

seq1  TTTATTCCAGGTTATTCTCAGTAAGACTCATTTATCACTGGAGAACTTTA  98
      |||| | ||||||||||||||| |||||||||||||||| ||||||||  
seq2  TTTA-TGCAGGTTATTCTCAGT-AGACTCATTTATCACT-GAGAACTTAT  97

seq1  TTTCCATGACAAA-TCAGTGCATTACACTCATTTTAAAAATG-TAAAACA  146
      ||||||||||||| |||||||||||||||||||||||||||| |||||||
seq2  TTTCCATGACAAATTCAGTGCATTACACTCATTTTAAAAATGTTAAAACA  147

seq1  AAGAAGCCCCTAAGGGCAGTTTCAACTG-TTTACTAAACTGCTAGCCAGT  195
      |||||| |||||| |||||||||||||| |||||||||||||||||||||
seq2  AAGAAG-CCCTAA-GGCAGTTTCAACTGTTTTACTAAACTGCTAGCCAGT  195

seq1  ACAATATGACAAGAAAAAAATGTAAAAATTAAAGGTTAGGAGGAGAAGTC  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATGACAAGAAAAAAATGTAAAAATTAAAGGTTAGGAGGAGAAGTC  245

seq1  AAATCATCC-TGACTGAAACAGTATCTGTCCTGGTTGGCTTTTTGTTGCA  294
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATCCTTGACTGAAACAGTATCTGTCCTGGTTGGCTTTTTGTTGCA  295

seq1  GTGACAAGCATCATGATCAAAAACAACTTGGGGAGAAAGGGTTTGATTCA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACAAGCATCATGATCAAAAACAACTTGGGGAGAAAGGGTTTGATTCA  345

seq1  TTCTACAGTTGTCAGCCATCACCAAGGGAAGCCAAGGCAAGAACTCAAGA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACAGTTGTCAGCCATCACCAAGGGAAGCCAAGGCAAGAACTCAAGA  395

seq1  AAGAAGCTGGAAGCCTGGAACTGAAGTAGCTCCTTAATTGAGTTTCTTTC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGCTGGAAGCCTGGAACTGAAGTAGCTCCTTAATTGAGTTTCTTTC  445

seq1  CTCTAGATGTACCTAGGTTTGTGCCAAGTTGACACAGACTTACTATGACA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGATGTACCTAGGTTTGTGCCAAGTTGACACAGACTTACTATGACA  495

seq1  GTAAATGAATGAACTGAAAAATGTTACTAAAAGTTTACCGTGATAATGTG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATGAATGAACTGAAAAATGTTACTAAAAGTTTACCGTGATAATGTG  545

seq1  GCTGGCTACAAAGGTGTGTTCAACACAGAAAACTCAGTACTCAAAATGAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCTACAAAGGTGTGTTCAACACAGAAAACTCAGTACTCAAAATGAA  595

seq1  TTTACTATACACATAGTAACTAATTAGAAAGTCCAATAGAAGAAACATTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTATACACATAGTAACTAATTAGAAAGTCCAATAGAAGAAACATTT  645

seq1  TCGCTCACAATAGCCACAGATTGTAAATAACTTAGAACACATTTGTGAAA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCTCACAATAGCCACAGATTGTAAATAACTTAGAACACATTTGTGAAA  695

seq1  ATGAGACTTAAGTCTACAACTTGTTTCCTGGTCTTCAGGAGTGATGAGAA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACTTAAGTCTACAACTTGTTTCCTGGTCTTCAGGAGTGATGAGAA  745

seq1  ATAGCACAATGTGAGTTCTTGCTACAAATCAAATCATAAAAGCAGTCCAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCACAATGTGAGTTCTTGCTACAAATCAAATCATAAAAGCAGTCCAA  795

seq1  TCTTAACATGAAAAAAGCCAGTGGCAGCATGGAGCTAAGCCACAGTTAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAACATGAAAAAAGCCAGTGGCAGCATGGAGCTAAGCCACAGTTAGA  845

seq1  CCAACAGGAAAAATATTGATGGTATGAGGGTATTTGAGTTTTCTAGAGAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAGGAAAAATATTGATGGTATGAGGGTATTTGAGTTTTCTAGAGAA  895

seq1  GTGATCTTGTAAATAAAATAAGATAGTTATAAATGTTTATAATTATATGT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTTGTAAATAAAATAAGATAGTTATAAATGTTTATAATTATATGT  945

seq1  TGCAATGCAAAAACTGTTATAGAAAGCAGTTTTAACAAAAATTGTGACAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGCAAAAACTGTTATAGAAAGCAGTTTTAACAAAAATTGTGACAG  995

seq1  AAAAATAAAGATACAAATATTTAAATAATATAATATATAATTATGGTATA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAAGATACAAATATTTAAATAATATAATATATAATTATGGTATA  1045

seq1  TATCAAGATGGGGAGTATGTGTTCAATACACAGAAAATAATAGTTCTATT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAGATGGGGAGTATGTGTTCAATACACAGAAAATAATAGTTCTATT  1095

seq1  TAAAACCATGCAATATTTCAAAACATATGTTCATATATTGTGCCACAAAG  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACCATGCAATATTTCAAAACATATGTTCATATATTGTGCCACAAAG  1145

seq1  AATTC  1149
      |||||
seq2  AATTC  1150

seq1: chr7_140443390_140444529
seq2: B6Ng01-255N01.g_69_1202

seq1  GAATTCCTTCACCTCCCTCCCCACATTACCCCCACACCCTGCTGAGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCACCTCCCTCCCCACATTACCCCCACACCCTGCTGAGGTCT  50

seq1  TGTGTGTGTCTCTGTGTGTGCAAAAACTTTCTTTAATTTGTGTTGTCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTCTCTGTGTGTGCAAAAACTTTCTTTAATTTGTGTTGTCAGA  100

seq1  GTCCTGATCTGCATCTTCTAAACCCCAGTTCACACGTGGCCTCTAAAGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGATCTGCATCTTCTAAACCCCAGTTCACACGTGGCCTCTAAAGGG  150

seq1  CCTTCCCCAGGGGAATGGTTCACACCCTCACTGTGAGTCCGCTGTGCACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCCAGGGGAATGGTTCACACCCTCACTGTGAGTCCGCTGTGCACT  200

seq1  GATGAGGTGGGAGGCATAGCCAGGCAGCCTCTACCGGATCACTCTTAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGTGGGAGGCATAGCCAGGCAGCCTCTACCGGATCACTCTTAGGA  250

seq1  TGTGGTTTAGCTTATGTGTGCAAGATTGAATGCTATGTGGCTTACCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTAGCTTATGTGTGCAAGATTGAATGCTATGTGGCTTACCCAGG  300

seq1  AAAAGGCATGGTTCCCATTTGTGTGAAACATGGTTGTGCACCATAAGGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCATGGTTCCCATTTGTGTGAAACATGGTTGTGCACCATAAGGTC  350

seq1  ATCAGGGTCCGAATCCTTTCTTTCTGGTGACTTCCCAGTCCCTTGTTCGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGGTCCGAATCCTTTCTTTCTGGTGACTTCCCAGTCCCTTGTTCGT  400

seq1  TCCTGTTACATGCATCATAAGATTGCTACTACCATGCCCTTGCTCTTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTACATGCATCATAAGATTGCTACTACCATGCCCTTGCTCTTGCC  450

seq1  AGCAGGAGGGACAAAGGCAAAGGAAGTTCCTGCCTTTCTCTTCAAGGATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGGGACAAAGGCAAAGGAAGTTCCTGCCTTTCTCTTCAAGGATA  500

seq1  GAACTTGATTTGGAAACTTGATTTAGCCTTTTAGCTGCAAAGGAGTCCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTGATTTGGAAACTTGATTTAGCCTTTTAGCTGCAAAGGAGTCCAG  550

seq1  GAGATTTAGTCTTTAGATCCAGACCTCAGGGGTCTAGCTAGGCTTGTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTAGTCTTTAGATCCAGACCTCAGGGGTCTAGCTAGGCTTGTTTA  600

seq1  CAATGGAGGAGTATGAGTAGGGCCAGTAGGGGGATTGTATTCCTTTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGAGGAGTATGAGTAGGGCCAGTAGGGGGATTGTATTCCTTTTTAA  650

seq1  CATTGCCTTCAGTCACAGAAGGTGCCGGCTAAGGTAGCTTTCTGCGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGCCTTCAGTCACAGAAGGTGCCGGCTAAGGTAGCTTTCTGCGCAGG  700

seq1  TCTGCTCACCCATCAGGTAACACGGAGCTTAGTTCATTTTTTAGTTCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTCACCCATCAGGTAACACGGAGCTTAGTTCATTTTTTAGTTCATT  750

seq1  AGTTGTCCTATCAGGGGGAACCATGGTGAATCCATGTGTTATTCTTCCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTCCTATCAGGGGGAACCATGGTGAATCCATGTGTTATTCTTCCCA  800

seq1  TCACCTGAGAAAGCCAGTGCTTAGGAACGTTCCTTGCTGTTGCCAAGCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGAGAAAGCCAGTGCTTAGGAACGTTCCTTGCTGTTGCCAAGCTA  850

seq1  GTGAGTGACTGCACCAGACACTGGCGAGGGTCAAACCTCTCACCATAATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTGACTGCACCAGACACTGGCGAGGGTCAAACCTCTCACCATAATC  900

seq1  TCTAGCCTAAGACTCGTTGGCAACGGCTACCTACCTGGAGCTGGTATCTC  950
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCTAGCCTAAGACTCGTTGGCAACGGCTACTTACCTGGAGCTGGTATCTC  950

seq1  AGGACACTAAACTCTGAAATCAAAGTAGTGTACGGTATAGTTCTA-TTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGACACTAAACTCTGAAATCAAAGTAGTGTACGGTATAGTTCTATTTTC  1000

seq1  CTATGAATAG-AGTTTTTCTTTCATTATTTGTATTTATAGAGTTTACTGA  1048
      |||||||||| |||||||| |||| || |||||||||| ||| |||||||
seq2  CTATGAATAGAAGTTTTTC-TTCA-TAATTGTATTTAT-GAGGTTACTGA  1047

seq1  AA-CTCCACTGTAAACAATACTTGCTCGGTTTGGTAAGTCACAGAACAAA  1097
      || ||||||||| |||||||||||||| ||||||| |||  |||| || |
seq2  AACCTCCACTGT-AACAATACTTGCTC-GTTTGGT-AGTTCCAGACCAGA  1094

seq1  ACAATAATGAGAATATGAT-GAAAGACAAGACGTGGCTGCTGAC  1140
        ||| |||||||| |||| ||||||||||||   |||||||||
seq2  CTAAT-ATGAGAAT-TGATGGAAAGACAAGAC--TGCTGCTGAC  1134

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information