BAC Information

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BAC

Clone NameB6Ng01-255N08
Chromosome7 (Build37)
Map Location 94,913,336 - 95,074,760
singlet/doubletdoublet
Overlap geneGrm5
Upstream geneFolh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-255N08.bB6Ng01-255N08.g
ACCGA061944GA061945
length1,0951,128
definitionB6Ng01-255N08.b B6Ng01-255N08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(95,073,654 - 95,074,760)(94,913,336 - 94,914,475)
sequence
gaattcatttttaagtcaacatagtctacttccatcaccatttccgggca
agtctgtgctcctggcatcctctctatgtaccccaggggcaaatttagct
gggtttcaaatgtgtgaatgccccattatatccgagtgtctgaaaatgtc
tttcttcacaaacacgcactgaacaagcagaatctgttctcagcaggaaa
caactgtgctgccgaagttggcagacagagttggaaagcaagcaagttat
gtttctgctcctctgcccaccaagcagcttcacccagcttcctttaaatg
ccccttcggttccctctcctccacaagtgaaaaacgctgggtattcacat
tcgctgttctaattgtttcgaataaacttccccaggagttgaattacctt
agcaaaggctttcagtattgaaccactttgaattctaagagtttgcaagt
aaaagtccccaaagacaggcattgttttcttcatctgttcgaaagtacaa
tgtttgcaagttgcaattttctttaccagagagtgtttctttgatttcat
gaaagtcatgggtaggagtgacacattgagagaaaaaaaaaaaagaaaga
aattgttctgactcaaaatactcttctggcacttcaccaagaatattttg
ctgaatccccttgaatctgatgggcatgacaggaagtaattactaagtaa
aatgtaagactggtgactgtgtcacagggaaactaggcacaggtcaagag
aggcagtgctcccagtacataaatcccaacaagcaggattgaattattta
tctgtcatttaataattgtgacatcctcaattctccactgaggttcccga
gagctcagcttttctattttcacagaataattatggatgacaatttaata
tcatagtgggtattattggttcatgaaaaataacactctcaaagatcaaa
aatgattgaaattttgaataaattagatttctgatcctatccaatcattt
caaaaatatatatgaactactagtatgctgacagcttatagctctctcta
tatctttcctctctccctgtgtgaatgttgtgccatgtgtgtgtg
gaattcccttattttgtaaaagttaatggcaaaacaattataaatcttat
taaagaagctttagttgttttacatctgaatagcaagactcacttggata
ataatcactttggtatttcttttagaacaatatcatttttgaacaattca
acaaagaacttttcaatcatcttttatgtttaattttttcatggttccat
aaaactttgtttttcattgttgttgttgttttttttattgttgttgttca
ttattcttgagtaaagaaaaatatatacaactactgccaagaaaaggaaa
aaatgttattcttcagtcttatgtgaataatagagatcttttatttatca
gacagttattcatcttctgttattagcaaactgatcaattacagatgaaa
tattattcttccttggaaattcgtaaagcaggagaatccaattgagggat
atgctgaggccagaacctctactctctttttctatgtgaaaatgatatga
tgtgtattatttttcttttttttaaacctttattcagtttttgagtcaaa
tgtagcctgggctgttctcaaactgggtatgtagacaaggataatgactt
tgaaattatttgaattaatgactttgaattttctgtctgcatgttgtagg
tgctaggattagaggtttgtagcattatgcctagttaatgcagtgctgca
ttttgaacactgaaccccacccttggacgaccaactgagcctatatgtca
atacaactttactttgagcagtcttcgctgtttcactggcttctgtgcca
gttcttgatctctagtggtttgttttcactaaagagataatctcaagtaa
tccttctaaattaatttacccaaatctctaggcttcttagtatcttctgg
cttacagttgatttctcacaggcagcctgattggctaggtggttttgatt
tctcacttgaggtgcattcttagcattgagaagatgccttagcctgatac
gtgaaaattattttgtataatgattactgagatctggagacttatacata
cgtagaaaattttagtattagtgatgtatagatgaattggataaacacag
taaacatcagctactaagtgacgcaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95073654_95074760
seq2: B6Ng01-255N08.b_45_1139 (reverse)

seq1  CACACACACA-CGCACACACATTCACACAGGGAGAGAGGGAAAGATATAG  49
      ||||||||||  ||||| ||||||||||||||||||| ||||||||||||
seq2  CACACACACATGGCACA-ACATTCACACAGGGAGAGA-GGAAAGATATAG  48

seq1  AGAGAGCTATAAGCCTGTCAGCATACTAGTAAGTTTCAATTATATATTTT  99
      ||||||||||||| |||||||||||||||||   ||||  ||||||||||
seq2  AGAGAGCTATAAG-CTGTCAGCATACTAGTA--GTTCA--TATATATTTT  93

seq1  TGAAATGATTTGGAATAGGATCCAAGAAATTCTAATTTATTCAAAAATTT  149
      ||||||||||  | ||||||||  ||||| |||||||||||| |||||||
seq2  TGAAATGATT--GGATAGGATC--AGAAA-TCTAATTTATTC-AAAATTT  137

seq1  CAATCATTTTTGATCTTTGAGAGTGTTATTTTTCATGAACCAATAATACC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTTTTGATCTTTGAGAGTGTTATTTTTCATGAACCAATAATACC  187

seq1  CACTATGATATTAAATTGTCATCCATAATTATTCTGTGAAAATAGAAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTATGATATTAAATTGTCATCCATAATTATTCTGTGAAAATAGAAAAG  237

seq1  CTGAGCTCTCGGGAACCTCAGTGGAGAATTGAGGATGTCACAATTATTAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCTCGGGAACCTCAGTGGAGAATTGAGGATGTCACAATTATTAA  287

seq1  ATGACAGATAAATAATTCAATCCTGCTTGTTGGGATTTATGTACTGGGAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGATAAATAATTCAATCCTGCTTGTTGGGATTTATGTACTGGGAG  337

seq1  CACTGCCTCTCTTGACCTGTGCCTAGTTTCCCTGTGACACAGTCACCAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTCTCTTGACCTGTGCCTAGTTTCCCTGTGACACAGTCACCAGT  387

seq1  CTTACATTTTACTTAGTAATTACTTCCTGTCATGCCCATCAGATTCAAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTTTACTTAGTAATTACTTCCTGTCATGCCCATCAGATTCAAGG  437

seq1  GGATTCAGCAAAATATTCTTGGTGAAGTGCCAGAAGAGTATTTTGAGTCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCAGCAAAATATTCTTGGTGAAGTGCCAGAAGAGTATTTTGAGTCA  487

seq1  GAACAATTTCTTTCTTTTTTTTTTTTCTCTCAATGTGTCACTCCTACCCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAATTTCTTTCTTTTTTTTTTTTCTCTCAATGTGTCACTCCTACCCA  537

seq1  TGACTTTCATGAAATCAAAGAAACACTCTCTGGTAAAGAAAATTGCAACT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTTTCATGAAATCAAAGAAACACTCTCTGGTAAAGAAAATTGCAACT  587

seq1  TGCAAACATTGTACTTTCGAACAGATGAAGAAAACAATGCCTGTCTTTGG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACATTGTACTTTCGAACAGATGAAGAAAACAATGCCTGTCTTTGG  637

seq1  GGACTTTTACTTGCAAACTCTTAGAATTCAAAGTGGTTCAATACTGAAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTTTTACTTGCAAACTCTTAGAATTCAAAGTGGTTCAATACTGAAAG  687

seq1  CCTTTGCTAAGGTAATTCAACTCCTGGGGAAGTTTATTCGAAACAATTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGCTAAGGTAATTCAACTCCTGGGGAAGTTTATTCGAAACAATTAG  737

seq1  AACAGCGAATGTGAATACCCAGCGTTTTTCACTTGTGGAGGAGAGGGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCGAATGTGAATACCCAGCGTTTTTCACTTGTGGAGGAGAGGGAAC  787

seq1  CGAAGGGGCATTTAAAGGAAGCTGGGTGAAGCTGCTTGGTGGGCAGAGGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGGGGCATTTAAAGGAAGCTGGGTGAAGCTGCTTGGTGGGCAGAGGA  837

seq1  GCAGAAACATAACTTGCTTGCTTTCCAACTCTGTCTGCCAACTTCGGCAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAACATAACTTGCTTGCTTTCCAACTCTGTCTGCCAACTTCGGCAG  887

seq1  CACAGTTGTTTCCTGCTGAGAACAGATTCTGCTTGTTCAGTGCGTGTTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTTGTTTCCTGCTGAGAACAGATTCTGCTTGTTCAGTGCGTGTTTG  937

seq1  TGAAGAAAGACATTTTCAGACACTCGGATATAATGGGGCATTCACACATT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAAGACATTTTCAGACACTCGGATATAATGGGGCATTCACACATT  987

seq1  TGAAACCCAGCTAAATTTGCCCCTGGGGTACATAGAGAGGATGCCAGGAG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCCAGCTAAATTTGCCCCTGGGGTACATAGAGAGGATGCCAGGAG  1037

seq1  CACAGACTTGCCCGGAAATGGTGATGGAAGTAGACTATGTTGACTTAAAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACTTGCCCGGAAATGGTGATGGAAGTAGACTATGTTGACTTAAAA  1087

seq1  ATGAATTC  1107
      ||||||||
seq2  ATGAATTC  1095

seq1: chr7_94913336_94914475
seq2: B6Ng01-255N08.g_67_1194

seq1  GAATTCCCTTATTTTGTAAAAGTTAATGGCAAAACAATTATAAATCTTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTTATTTTGTAAAAGTTAATGGCAAAACAATTATAAATCTTAT  50

seq1  TAAAGAAGCTTTAGTTGTTTTACATCTGAATAGCAAGACTCACTTGGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCTTTAGTTGTTTTACATCTGAATAGCAAGACTCACTTGGATA  100

seq1  ATAATCACTTTGGTATTTCTTTTAGAACAATATCATTTTTGAACAATTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCACTTTGGTATTTCTTTTAGAACAATATCATTTTTGAACAATTCA  150

seq1  ACAAAGAACTTTTCAATCATCTTTTATGTTTAATTTTTTCATGGTTCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGAACTTTTCAATCATCTTTTATGTTTAATTTTTTCATGGTTCCAT  200

seq1  AAAACTTTGTTTTTCATTGTTGTTGTTGTTTTTTTTATTGTTGTTGTTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTTGTTTTTCATTGTTGTTGTTGTTTTTTTTATTGTTGTTGTTCA  250

seq1  TTATTCTTGAGTAAAGAAAAATATATACAACTACTGCCAAGAAAAGGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTGAGTAAAGAAAAATATATACAACTACTGCCAAGAAAAGGAAA  300

seq1  AAATGTTATTCTTCAGTCTTATGTGAATAATAGAGATCTTTTATTTATCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTTATTCTTCAGTCTTATGTGAATAATAGAGATCTTTTATTTATCA  350

seq1  GACAGTTATTCATCTTCTGTTATTAGCAAACTGATCAATTACAGATGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTTATTCATCTTCTGTTATTAGCAAACTGATCAATTACAGATGAAA  400

seq1  TATTATTCTTCCTTGGAAATTCGTAAAGCAGGAGAATCCAATTGAGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTCTTCCTTGGAAATTCGTAAAGCAGGAGAATCCAATTGAGGGAT  450

seq1  ATGCTGAGGCCAGAACCTCTACTCTCTTTTTCTATGTGAAAATGATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGGCCAGAACCTCTACTCTCTTTTTCTATGTGAAAATGATATGA  500

seq1  TGTGTATTATTTTTCTTTTTTTTAAACCTTTATTCAGTTTTTGAGTCAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATTATTTTTCTTTTTTTTAAACCTTTATTCAGTTTTTGAGTCAAA  550

seq1  TGTAGCCTGGGCTGTTCTCAAACTGGGTATGTAGACAAGGATAATGACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCCTGGGCTGTTCTCAAACTGGGTATGTAGACAAGGATAATGACTT  600

seq1  TGAAATTATTTGAATTAATGACTTTGAATTTTCTGTCTGCATGTTGTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTATTTGAATTAATGACTTTGAATTTTCTGTCTGCATGTTGTAGG  650

seq1  TGCTAGGATTAGAGGTTTGTAGCATTATGCCTAGTTAATGCAGTGCTGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGGATTAGAGGTTTGTAGCATTATGCCTAGTTAATGCAGTGCTGCA  700

seq1  TTTTGAACACTGAACCCCACCCTTGGACGACCAACTGAGCCTATATGTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAACACTGAACCCCACCCTTGGACGACCAACTGAGCCTATATGTCA  750

seq1  ATACAACTTTACTTTGAGCAGTCTTCGCTGTTTCACTGGCTTCTGTGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACTTTACTTTGAGCAGTCTTCGCTGTTTCACTGGCTTCTGTGCCA  800

seq1  GTTCTTGATCTCTAGTGGTTTGTTTTCACTAAAGAGATAATCTCAAGTAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTGATCTCTAGTGGTTTGTTTTCACTAAAGAGATAATCTCAAGTAA  850

seq1  TCCTTCTAAATTAATTTACCCAAATCTCTAGGCTTCTTAGTATCTTCTGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTAAATTAATTTACCCAAATCTCTAGGCTTCTTAGTATCTTCTGG  900

seq1  CTTACAGTTGATTTCTCACAGGCAGCCTGATTGGCTAGGTGGTTTTGATT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAGTTGATTTCTCACAGGCAGCCTGATTGGCTAGGTGGTTTTGATT  950

seq1  TCTCACTTGAGGTGCATTCTTAGCATTGAGAAGAATGCCTTAAGCCTGAT  1000
      ||||||||||||||||||||||||||||||||| ||||||| ||||||||
seq2  TCTCACTTGAGGTGCATTCTTAGCATTGAGAAG-ATGCCTT-AGCCTGAT  998

seq1  ACGTGAAAATTATTTTGTAATTAATGATTTACTGAGATTCTGGAAGAACT  1050
      |||||||||||||||||||  |||||| ||||||||| ||||||   |||
seq2  ACGTGAAAATTATTTTGTA--TAATGA-TTACTGAGA-TCTGGA--GACT  1042

seq1  TATTACATACGTAGAAAATTTTAAGTATTAGTGATGTATAGATGATATTG  1100
      || ||||||||||||||||||| ||||||||||||||||||||||  | |
seq2  TA-TACATACGTAGAAAATTTT-AGTATTAGTGATGTATAGATGAATTGG  1090

seq1  ATAAACACAGGAAACAATTCAGCTACTAAGTGACGCAAAA  1140
      |||||||||| |||||  ||||||||||||||||||||||
seq2  ATAAACACAGTAAACA--TCAGCTACTAAGTGACGCAAAA  1128