BAC Information

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BAC

Clone NameB6Ng01-256G06
Chromosome7 (Build37)
Map Location 104,272,257 - 104,420,768
singlet/doubletdoublet
Overlap geneGab2
Upstream geneEG666836, Odz4, LOC670727, LOC666858, Nars2
Downstream geneLOC100040457, Usp35, EG622320, Alg8, Ndufc2, Thrsp, Kctd14, Ints4, 1810020D17Rik, Rsf1, LOC622994, LOC100040211, Clns1a, Aqp11, LOC100040594, Pak1, Gdpd4, Myo7a, Capn5, Omp, B3gnt6, Phca
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256G06.bB6Ng01-256G06.g
ACCGA062362GA062363
length1,1051,134
definitionB6Ng01-256G06.b B6Ng01-256G06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(104,419,657 - 104,420,768)(104,272,257 - 104,273,386)
sequence
gaattcaatgatgattttgtagtaacacagatcaaaacaaaaattatgaa
ggttatataaaggtttatataaaagatgtcttgttatctttgtgtttctt
tgcctaaaaaagtaagcatttttactcccttgacattaaaactgaaattc
agggactagagagtcaaaggccctgagtagtcactttcccgcatggtggc
catggcagtctcctaccttgcattttctgtccttctgcttatgcactggt
gcaagtagagatactcctgaggtgcactggtggacaaggtaggctgcatg
tggcttgacacagggggctcaaacgtgaataaagtaggctggctagagtg
tgaaggggctgaggacttccgttctcggagcaggtgctgactggagctga
actcagctggagaagagcggggaccatgactggctgaagaaaggttcctc
agggagtctgtgaaaagaagaaagggctttgtgagtgaaataaagtaggg
aaagtgtccttgtcttaaagacagttgtcagagagagaaaaaaagtattt
ggataagagacagtaatatggctgccacattctttccctcagacactcat
tacctctgtcttcccagggaggcaggttgggcattgtggccatcttggct
gaatgggagatgagttacacctctgaaaagcttaggagaagtctgaaggc
caggttatcataacctagacctgatctgctctacccagggggtttgccta
tccaatcccagagtgacccttagagtgacaagactagactctggatgggt
gagcaccatgcttccttcctgtaggtggctcctgttgggagcagatgaag
attggagtgaatgtatactgttgacatgcccatgggccttgtcaagaacc
tcagtgactctgactcatgagccttcccttgagtgaggctcagaggcatg
gcagaccttcctctggtctaggtaacagtgttaagatacgtgagcactgt
gtatatacaaaactagaaacctcacttcccctctgatgtctgccaactag
ttcttttccctacaggagcccttctacctcagactagtagtccttctcct
gtgtt
gaattcttttaaatgcagaggaactagcttgtttcttcaacaagctcttg
tccgtcctagtcatgtagcacttctcaaggcaggctagagccaactagaa
ttaaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaggaaagaaagaaagaaagaaaatataaaaatgttctcctttaga
gaaattattaggtaacttctttttacaaatctaaataaattctgccacat
atatatgatatctaaccccactgaagctaagaatgaaaagagtatagtca
ataatagtatttgctatatcaactcagtatcagggccaggcagtgtagta
cgtatttggtagatagcatttgcctacattttgggaactttctcttattc
taagtccctttaatatcgtcaagaatttttagctttacatttagaacctt
gatcttttgtggcttttctcctgtttaattagtaagagtcattataatca
tcaggctttagagctagatcacacacacacacacaaacaaaggacccaag
ttcagttcccagaacctccatggaaggttacaactatctataccttcatt
tctagggaatcagagtcctcttctgatatcaagcatgtgtgcacacacat
gcacaggcgcacacacattctgacagaatacttattcacataaaataaaa
ataaatagattttaaaagcaataacaaagaaagcaaattcacttcataat
tgtatatacataaatagttagttttaacagtttcctcatttttcaaccat
ggcttctaaaggtagaatgattcttattccttgttcacttctaggactct
acttttatctgatggtctgaataaagtaaaaatataaaaatcaagacaat
agtggtctttccataataaagagtttggggggaggcagagtgtcagtttt
agtcagagtgtgggcatagcactgtttcagtgccctgccactgaaggtgg
gataatggaagagcagggcccttaccactctctaagttctgttgttttgt
ttttgagaacaggattattgttctgttagccaagactgacctataactca
tagtgtcctctgccctctgcttcctaagttatta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_104419657_104420768
seq2: B6Ng01-256G06.b_47_1151 (reverse)

seq1  AACACAGGAGAAGACCTTACCTAGTCTGA-GTAGGAGGGCT-CTGTAGGG  48
      |||||||||||||  ||   ||||||||| |||| |||||| ||||||||
seq2  AACACAGGAGAAGGACT--ACTAGTCTGAGGTAGAAGGGCTCCTGTAGGG  48

seq1  AAAAAGACTTAGTTTGCAGACATTCAGGAAGGGGAAGTTGAGGTTTCTAG  98
       ||||||  ||||| ||||||| ||||  |||||||| ||||||||||||
seq2  -AAAAGAACTAGTTGGCAGACA-TCAG--AGGGGAAG-TGAGGTTTCTAG  93

seq1  TTTTTGTATATACACAGTGCTCACGTATTCTTAAACACTGTTACCTAGAC  148
       |||||||||||||||||||||||||| |||| |||||||||||||||||
seq2  -TTTTGTATATACACAGTGCTCACGTA-TCTT-AACACTGTTACCTAGAC  140

seq1  CAGAGGAAGGTCTTGCCATGCCTCTGAGCCTCACTCAA-GGAAGGCTCAT  197
      |||||||||||| ||||||||||||||||||||||||| |||||||||||
seq2  CAGAGGAAGGTC-TGCCATGCCTCTGAGCCTCACTCAAGGGAAGGCTCAT  189

seq1  GAGTCAGAGTCACTGAGGTTCTTGACAAGG-CCATGGGCATGTCAACAGT  246
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GAGTCAGAGTCACTGAGGTTCTTGACAAGGCCCATGGGCATGTCAACAGT  239

seq1  ATACATTCACTCCAATCTTCATCTGCTCCCAACAGGAGCCACCTACAGGA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTCACTCCAATCTTCATCTGCTCCCAACAGGAGCCACCTACAGGA  289

seq1  AGGAAGCATGGTGCTCACCCATCCAGAGTCTAGTCTTGTCACTCTAAGGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGCATGGTGCTCACCCATCCAGAGTCTAGTCTTGTCACTCTAAGGG  339

seq1  TCACTCTGGGATTGGATAGGCAAACCCCCTGGGTAGAGCAGATCAGGTCT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCTGGGATTGGATAGGCAAACCCCCTGGGTAGAGCAGATCAGGTCT  389

seq1  AGGTTATGATAACCTGGCCTTCAGACTTCTCCTAAGCTTTTCAGAGGTGT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTATGATAACCTGGCCTTCAGACTTCTCCTAAGCTTTTCAGAGGTGT  439

seq1  AACTCATCTCCCATTCAGCCAAGATGGCCACAATGCCCAACCTGCCTCCC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCTCCCATTCAGCCAAGATGGCCACAATGCCCAACCTGCCTCCC  489

seq1  TGGGAAGACAGAGGTAATGAGTGTCTGAGGGAAAGAATGTGGCAGCCATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGACAGAGGTAATGAGTGTCTGAGGGAAAGAATGTGGCAGCCATA  539

seq1  TTACTGTCTCTTATCCAAATACTTTTTTTCTCTCTCTGACAACTGTCTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTCTCTTATCCAAATACTTTTTTTCTCTCTCTGACAACTGTCTTT  589

seq1  AAGACAAGGACACTTTCCCTACTTTATTTCACTCACAAAGCCCTTTCTTC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAAGGACACTTTCCCTACTTTATTTCACTCACAAAGCCCTTTCTTC  639

seq1  TTTTCACAGACTCCCTGAGGAACCTTTCTTCAGCCAGTCATGGTCCCCGC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACAGACTCCCTGAGGAACCTTTCTTCAGCCAGTCATGGTCCCCGC  689

seq1  TCTTCTCCAGCTGAGTTCAGCTCCAGTCAGCACCTGCTCCGAGAACGGAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCCAGCTGAGTTCAGCTCCAGTCAGCACCTGCTCCGAGAACGGAA  739

seq1  GTCCTCAGCCCCTTCACACTCTAGCCAGCCTACTTTATTCACGTTTGAGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCAGCCCCTTCACACTCTAGCCAGCCTACTTTATTCACGTTTGAGC  789

seq1  CCCCTGTGTCAAGCCACATGCAGCCTACCTTGTCCACCAGTGCACCTCAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGTGTCAAGCCACATGCAGCCTACCTTGTCCACCAGTGCACCTCAG  839

seq1  GAGTATCTCTACTTGCACCAGTGCATAAGCAGAAGGACAGAAAATGCAAG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATCTCTACTTGCACCAGTGCATAAGCAGAAGGACAGAAAATGCAAG  889

seq1  GTAGGAGACTGCCATGGCCACCATGCGGGAAAGTGACTACTCAGGGCCTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGAGACTGCCATGGCCACCATGCGGGAAAGTGACTACTCAGGGCCTT  939

seq1  TGACTCTCTAGTCCCTGAATTTCAGTTTTAATGTCAAGGGAGTAAAAATG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTCTCTAGTCCCTGAATTTCAGTTTTAATGTCAAGGGAGTAAAAATG  989

seq1  CTTACTTTTTTAGGCAAAGAAACACAAAGATAACAAGACATCTTTTATAT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTTTTTTAGGCAAAGAAACACAAAGATAACAAGACATCTTTTATAT  1039

seq1  AAACCTTTATATAACCTTCATAATTTTTGTTTTGATCTGTGTTACTACAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTTTATATAACCTTCATAATTTTTGTTTTGATCTGTGTTACTACAA  1089

seq1  AATCATCATTGAATTC  1112
      ||||||||||||||||
seq2  AATCATCATTGAATTC  1105

seq1: chr7_104272257_104273386
seq2: B6Ng01-256G06.g_64_1197

seq1  GAATTCTTTTAAATGCAGAGGAACTAGCTTGTTTCTTCAACAAGCTCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAAATGCAGAGGAACTAGCTTGTTTCTTCAACAAGCTCTTG  50

seq1  TCCGTCCTAGTCATGTAGCACTTCTCAAGGCAGGCTAGAGCCAACTAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCCTAGTCATGTAGCACTTCTCAAGGCAGGCTAGAGCCAACTAGAA  100

seq1  TTAAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  150
      ||||||    ||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAA----AAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG  146

seq1  AAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAATATAAAAATGTTCTCCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGAAGGAAAGAAAGAAAGAAAGAAAATATAAAAATGTTCTCCTT  196

seq1  TAGAGAAATTATTAGGTAACTTCTTTTTACAAATCTAAATAAATTCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAAATTATTAGGTAACTTCTTTTTACAAATCTAAATAAATTCTGCC  246

seq1  ACATATATATGATATCTAACCCCACTGAAGCTAAGAATGAAAAGAGTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATATGATATCTAACCCCACTGAAGCTAAGAATGAAAAGAGTATA  296

seq1  GTCAATAATAGTATTTGCTATATCAACTCAGTATCAGGGCCAGGCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAATAATAGTATTTGCTATATCAACTCAGTATCAGGGCCAGGCAGTGT  346

seq1  AGTACGTATTTGGTAGATAGCATTTGCCTACATTTTGGGAACTTTCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACGTATTTGGTAGATAGCATTTGCCTACATTTTGGGAACTTTCTCTT  396

seq1  ATTCTAAGTCCCTTTAATATCGTCAAGAATTTTTAGCTTTACATTTAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAGTCCCTTTAATATCGTCAAGAATTTTTAGCTTTACATTTAGAA  446

seq1  CCTTGATCTTTTGTGGCTTTTCTCCTGTTTAATTAGTAAGAGTCATTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGATCTTTTGTGGCTTTTCTCCTGTTTAATTAGTAAGAGTCATTATA  496

seq1  ATCATCAGGCTTTAGAGCTAGATCACACACACACACACAAACAAAGGACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCAGGCTTTAGAGCTAGATCACACACACACACACAAACAAAGGACC  546

seq1  CAAGTTCAGTTCCCAGAACCTCCATGGAAGGTTACAACTATCTATACCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCAGTTCCCAGAACCTCCATGGAAGGTTACAACTATCTATACCTT  596

seq1  CATTTCTAGGGAATCAGAGTCCTCTTCTGATATCAAGCATGTGTGCACAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTAGGGAATCAGAGTCCTCTTCTGATATCAAGCATGTGTGCACAC  646

seq1  ACATGCACAGGCGCACACACATTCTGACAGAATACTTATTCACATAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGCACAGGCGCACACACATTCTGACAGAATACTTATTCACATAAAAT  696

seq1  AAAAATAAATAGATTTTAAAAGCAATAACAAAGAAAGCAAATTCACTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAAATAGATTTTAAAAGCAATAACAAAGAAAGCAAATTCACTTCA  746

seq1  TAATTGTATATACATAAATAGTTAGTTTTAACAGTTTCCTCATTTTTCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTATATACATAAATAGTTAGTTTTAACAGTTTCCTCATTTTTCAA  796

seq1  CCATGGCTTCT-AAGGTAGAATGATTCTTATTCCTTGTTCACTTCTAGGA  849
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  CCATGGCTTCTAAAGGTAGAATGATTCTTATTCCTTGTTCACTTCTAGGA  846

seq1  CTCTACTTTTATCTGATGGTCTGAATAAAGTAAAAATATAAAAATCAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACTTTTATCTGATGGTCTGAATAAAGTAAAAATATAAAAATCAAGA  896

seq1  CAATAGTGGTCTTTCCATAATAAAGAGTT--GGGGGAGGCAGAGTGTCAG  947
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  CAATAGTGGTCTTTCCATAATAAAGAGTTTGGGGGGAGGCAGAGTGTCAG  946

seq1  TTTTAGTCAGAGTGTGGGCATAGCACTGTTTCAGTGCCCTG-CACTGAAG  996
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TTTTAGTCAGAGTGTGGGCATAGCACTGTTTCAGTGCCCTGCCACTGAAG  996

seq1  GTGGGATAATGGAAGAGGCAGGGCCC-TACCACT-TCTAAGTTCTGTTG-  1043
      |||||||||||||||| ||||||||| ||||||| |||||||||||||| 
seq2  GTGGGATAATGGAAGA-GCAGGGCCCTTACCACTCTCTAAGTTCTGTTGT  1045

seq1  TTTGTTTTTGAG-ACAGGA-TATTGTTCTG-TAGCCCAGACTGGCCTATA  1090
      |||||||||||| |||||| |||||||||| ||||| |||||| ||||||
seq2  TTTGTTTTTGAGAACAGGATTATTGTTCTGTTAGCCAAGACTGACCTATA  1095

seq1  ACTCATAGTGGTTCTCCTGCCTCTGCTTCCTAAGTTATTA  1130
      ||||||||| || |||   |||||||||||||||||||||
seq2  ACTCATAGT-GTCCTCTGCCCTCTGCTTCCTAAGTTATTA  1134