BAC Information

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BAC

Clone NameB6Ng01-256O10
Chromosome7 (Build37)
Map Location 109,786,878 - 109,807,154
singlet/doubletdoublet
Overlap geneOlfr554, LOC100040840
Upstream geneClpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553
Downstream geneOlfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256O10.bB6Ng01-256O10.g
ACCGA062741GA062742
length1,1351,105
definitionB6Ng01-256O10.b B6Ng01-256O10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,786,878 - 109,788,017)(109,806,046 - 109,807,154)
sequence
gaattcccgagactcttgcacagagtgtttataagttcaatgtctctgaa
gcaggtgtagagttctgggctcttttgacatgatccagtcttgggaaagc
atcttatgaagaggaaacaagaaaaagagcagggaccactaggaagactt
ctagctgatgaggatgaggataactgggattcctgagcatccaactctac
atcatgcccctattaaaaaggtaggggcctcatagactgcacataaggtg
cttggaaatctttttatcacaccaatgcaaacacaatacttaccttttaa
acatctttacagtgttttaaatagaaatagcacactattctcatgcaacc
aagctatgcactgtgctactgaggaatttatagtagagaatgagacagaa
aaaaaaaagctgttggccttctggcacttgcattgtatttggagaaacat
tcacatcagcaaatcagagaattttgcattgcagaagacacttaattaag
ggttaaagcaggctttcttaaggtgataattaggccacagcagggggatt
gcaaaaagataggactgtctcaatgccaggaaatagcatgaataatcttc
agaggtaaaagaacatgaagagttgacaaatatccactcacattggaagg
tagtaggcaaagtggtgaggaacagcaagaccaggactggtaatggggat
gtatctggataggggtctgaggcaggagactgtcttaatgtgaatactca
cctcttaccatctctttgaggcacttttgcagtctccttgcatgtttagg
gtacacagcttgcttctgaccagggggtataaggagatatttagtgctag
gatcccagagagaaggttggctccatctactctaatgtagctctccagtc
ctgagtaaccgtttcactgccatcagtgtttagagatgggcctgaagaga
tgaaatggaggtggatattcagcatgaagagagaaagaaggctggaagga
agtgtactcaccagctggtctcttaagtccactgtgcagaagttcaggag
ggcatagaaaagggtgagtcttggtctcagctctcttaccctatgcctgg
tattctctatttgcccacagtctcagaccgtgcat
gaattcagtgactccccttctcttggtgtatgtactttgctatgccctta
acccactgtgtttatgatgaactctatgacacattagtgaacacacaaat
gtcaaacatataaattagtttcgttttataaacctaaatttaaggtagca
aagaacagaaaatgatacataaaaatgtatgcaaattttattttcataat
cttttgatacaccagaaatcaggaaaccaatactggaactcttcattcaa
gcaacatttaactcattttcagaataatgtctgaaacatatgaaaagctg
atcttttcttcccgttgtcttttggtgaaggaggggatttgaaataaatt
ctcactatgtcactgggattgatcttgaccttgtaatcctcctgcccgag
gtccaggaatgccaggctcacaggtatgtaccaccacgaccctcttcttc
tctttctattgctacagctaaaaaatgatgtcgctctatatgtcagatga
cgtatggcatttttctcacatttacaccactttcagcaaatttttcactc
ttaagttacaataaactatttttctagaaatctaacttattaataacaaa
aaacccacctctttttaagagcttctaatttggactaaaaaggtggctta
gtggttaagagcactgactgttctcccagaggtcctaagtttaattccca
gcaaccacatggtgactcacaaccatctgtaatgggatccgatgccctct
tctggtgtgtctggagacagctacagtgtactcatatacataaaataaat
aagtaaatctaaaaatattaaattaaaattatttttttaaaaaaaagctt
ctaatgttcttaaagagagtcatgaactccactctcagaaccccaggtag
ctgcctgcctcactagccctaaatcctaacagtttccaccagtttctctt
tcatttggtccccttcaatccagcccaaaatttacacttgggatctctga
tacaagtttctagaaaaatgacttttccagttctatcatgtctcccccac
atcttgttttctgtttgcgagcatctacgtatctaacgtgaacctttcga
atgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109786878_109788017
seq2: B6Ng01-256O10.b_48_1182

seq1  GAATTCCCGAGACTCTTGCACAGAGTGTTTATAAGTTCAATGTCTCTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCGAGACTCTTGCACAGAGTGTTTATAAGTTCAATGTCTCTGAA  50

seq1  GCAGGTGTAGAGTTCTGGGCTCTTTTGACATGATCCAGTCTTGGGAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGTAGAGTTCTGGGCTCTTTTGACATGATCCAGTCTTGGGAAAGC  100

seq1  ATCTTATGAAGAGGAAACAAGAAAAAGAGCAGGGACCACTAGGAAGACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGAAGAGGAAACAAGAAAAAGAGCAGGGACCACTAGGAAGACTT  150

seq1  CTAGCTGATGAGGATGAGGATAACTGGGATTCCTGAGCATCCAACTCTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTGATGAGGATGAGGATAACTGGGATTCCTGAGCATCCAACTCTAC  200

seq1  ATCATGCCCCTATTAAAAAGGTAGGGGCCTCATAGACTGCACATAAGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCCCCTATTAAAAAGGTAGGGGCCTCATAGACTGCACATAAGGTG  250

seq1  CTTGGAAATCTTTTTATCACACCAATGCAAACACAATACTTACCTTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAATCTTTTTATCACACCAATGCAAACACAATACTTACCTTTTAA  300

seq1  ACATCTTTACAGTGTTTTAAATAGAAATAGCACACTATTCTCATGCAACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTTTACAGTGTTTTAAATAGAAATAGCACACTATTCTCATGCAACC  350

seq1  AAGCTATGCACTGTGCTACTGAGGAATTTATAGTAGAGAATGAGACAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATGCACTGTGCTACTGAGGAATTTATAGTAGAGAATGAGACAGAA  400

seq1  AAAAAAAAGCTGTTGGCCTTCTGGCACTTGCATTGTATTTGGAGAAACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGCTGTTGGCCTTCTGGCACTTGCATTGTATTTGGAGAAACAT  450

seq1  TCACATCAGCAAATCAGAGAATTTTGCATTGCAGAAGACACTTAATTAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACATCAGCAAATCAGAGAATTTTGCATTGCAGAAGACACTTAATTAAG  500

seq1  GGTTAAAGCAGGCTTTCTTAAGGTGATAATTAGGCCACAGCAGGGGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAAGCAGGCTTTCTTAAGGTGATAATTAGGCCACAGCAGGGGGATT  550

seq1  GCAAAAAGATAGGACTGTCTCAATGCCAGGAAATAGCATGAATAATCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAAAGATAGGACTGTCTCAATGCCAGGAAATAGCATGAATAATCTTC  600

seq1  AGAGGTAAAAGAACATGAAGAGTTGACAAATATCCACTCACATTGGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTAAAAGAACATGAAGAGTTGACAAATATCCACTCACATTGGAAGG  650

seq1  TAGTAGGCAAAGTGGTGAGGAACAGCAAGACCAGGACTGGTAATGGGGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGCAAAGTGGTGAGGAACAGCAAGACCAGGACTGGTAATGGGGAT  700

seq1  GTATCTGGATAGGGGTCTGAGGCAGGAGACTGTCTTAATGTGAATACTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTGGATAGGGGTCTGAGGCAGGAGACTGTCTTAATGTGAATACTCA  750

seq1  CCTCTTACCATCTCTTTGAGGCACTTTTGCAGTCTCCTTGCATGTTTAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTACCATCTCTTTGAGGCACTTTTGCAGTCTCCTTGCATGTTTAGG  800

seq1  GTACACAGCTTGCTTCTGACCAGGGGGTATAAGGAGATATTTAGTGCTAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACAGCTTGCTTCTGACCAGGGGGTATAAGGAGATATTTAGTGCTAG  850

seq1  GATCCCAGAGAGAAGGTTGGCTCCATCTACTCTAATGTAGCTCTCCAGTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCCAGAGAGAAGGTTGGCTCCATCTACTCTAATGTAGCTCTCCAGTC  900

seq1  CTGAGTAACCGTTTCACTGCCATCAGTGTTTAGAGAT-GGCCTGAAGAGA  949
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGAGTAACCGTTTCACTGCCATCAGTGTTTAGAGATGGGCCTGAAGAGA  950

seq1  TGAAATGGAGGTGGAATATTCAGCATGAAGAGGAAGAAAGAAGGCTGGGA  999
      |||||||||||||| |||||||||||||||||  |||||||||||| |||
seq2  TGAAATGGAGGTGG-ATATTCAGCATGAAGAG--AGAAAGAAGGCT-GGA  996

seq1  AGGAAGTGTACTTCACAGCTGGTCTCTTAAGT-CACTGTGCAG-AGTCAG  1047
      ||||||||||||   ||||||||||||||||| |||||||||| |||   
seq2  AGGAAGTGTACTCACCAGCTGGTCTCTTAAGTCCACTGTGCAGAAGTTCA  1046

seq1  GGAGGGCCATAG-ATAGGGTGAGTCT--GTCTCAGCTCTCTTACCCTATG  1094
      |||||| ||||| | |||||||||||  ||||||||||||||||||||| 
seq2  GGAGGG-CATAGAAAAGGGTGAGTCTTGGTCTCAGCTCTCTTACCCTAT-  1094

seq1  GCCTGGGTATTCTCTATTTGCCCCACCAGGTCTCAGCACGGTGCAT  1140
      |||| ||||||||||||||| |||||   ||||||| || ||||||
seq2  GCCT-GGTATTCTCTATTTG-CCCAC--AGTCTCAG-ACCGTGCAT  1135

seq1: chr7_109806046_109807154
seq2: B6Ng01-256O10.g_64_1168 (reverse)

seq1  AGCATTTGGAAAAGGGTCACGGTTAGATACGGTTAGATTGGCTCGGCAAA  50
      |||||| |  ||||| |||| ||||||||||  |||||  |||| |||||
seq2  AGCATTCG--AAAGGTTCAC-GTTAGATACG--TAGAT--GCTC-GCAAA  42

seq1  CAGAAA--CAGATGT-GGGGAGACATGATAAGGAAACTGGAAAAGTCA-T  96
      ||||||   |||||| ||||||||||||||    |||||||||||||| |
seq2  CAGAAAACAAGATGTGGGGGAGACATGATA---GAACTGGAAAAGTCATT  89

seq1  TTTCTAGAAACTTTGTATCAGAGAT-CCAAGTGTAA--TTTTGGCTGGAT  143
      ||||||||||| ||||||||||||| ||||||||||  ||| ||||||||
seq2  TTTCTAGAAAC-TTGTATCAGAGATCCCAAGTGTAAATTTTGGGCTGGAT  138

seq1  TGAA-GGGACCAAATGAAAGAGAAACTGGTGGAAACTGTTAGGATTTAGG  192
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGGACCAAATGAAAGAGAAACTGGTGGAAACTGTTAGGATTTAGG  188

seq1  GCTAGTGAGGCAGGCAGCTACCTGGGGTTCTGAGAGTGGAGTTCATGACT  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTGAGGCAGGCAGCTACCTGGGGTTCTGAGAGTGGAGTTCATGACT  238

seq1  CTCCTTAAGAACATTAGAAGCTTTTTTTTAAAAAAATAATTTTAATTTAA  292
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTTAAGAACATTAGAAGCTTTTTTTTAAAAAAATAATTTTAATTTAA  288

seq1  TATTTTTAGATTTACTTATTTATTTTATGTATATGAGTACACTGTAGCTG  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTAGATTTACTTATTTATTTTATGTATATGAGTACACTGTAGCTG  338

seq1  TCTCCAGACACACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGACACACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTG  388

seq1  AGTCACCATGTGGTTGCTGGGAATTAAACTTAGGACCTCTGGGAGAACAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCACCATGTGGTTGCTGGGAATTAAACTTAGGACCTCTGGGAGAACAG  438

seq1  TCAGTGCTCTTAACCACTAAGCCACCTTTTTAGTCCAAATTAGAAGCTCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGCTCTTAACCACTAAGCCACCTTTTTAGTCCAAATTAGAAGCTCT  488

seq1  TAAAAAGAGGTGGGTTTTTTGTTATTAATAAGTTAGATTTCTAGAAAAAT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAGAGGTGGGTTTTTTGTTATTAATAAGTTAGATTTCTAGAAAAAT  538

seq1  AGTTTATTGTAACTTAAGAGTGAAAAATTTGCTGAAAGTGGTGTAAATGT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTGTAACTTAAGAGTGAAAAATTTGCTGAAAGTGGTGTAAATGT  588

seq1  GAGAAAAATGCCATACGTCATCTGACATATAGAGCGACATCATTTTTTAG  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAATGCCATACGTCATCTGACATATAGAGCGACATCATTTTTTAG  638

seq1  CTGTAGCAATAGAAAGAGAAGAAGAGGGTCGTGGTGGTACATACCTGTGA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGCAATAGAAAGAGAAGAAGAGGGTCGTGGTGGTACATACCTGTGA  688

seq1  GCCTGGCATTCCTGGACCTCGGGCAGGAGGATTACAAGGTCAAGATCAAT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGCATTCCTGGACCTCGGGCAGGAGGATTACAAGGTCAAGATCAAT  738

seq1  CCCAGTGACATAGTGAGAATTTATTTCAAATCCCCTCCTTCACCAAAAGA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTGACATAGTGAGAATTTATTTCAAATCCCCTCCTTCACCAAAAGA  788

seq1  CAACGGGAAGAAAAGATCAGCTTTTCATATGTTTCAGACATTATTCTGAA  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACGGGAAGAAAAGATCAGCTTTTCATATGTTTCAGACATTATTCTGAA  838

seq1  AATGAGTTAAATGTTGCTTGAATGAAGAGTTCCAGTATTGGTTTCCTGAT  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGTTAAATGTTGCTTGAATGAAGAGTTCCAGTATTGGTTTCCTGAT  888

seq1  TTCTGGTGTATCAAAAGATTATGAAAATAAAATTTGCATACATTTTTATG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGTGTATCAAAAGATTATGAAAATAAAATTTGCATACATTTTTATG  938

seq1  TATCATTTTCTGTTCTTTGCTACCTTAAATTTAGGTTTATAAAACGAAAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATTTTCTGTTCTTTGCTACCTTAAATTTAGGTTTATAAAACGAAAC  988

seq1  TAATTTATATGTTTGACATTTGTGTGTTCACTAATGTGTCATAGAGTTCA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATATGTTTGACATTTGTGTGTTCACTAATGTGTCATAGAGTTCA  1038

seq1  TCATAAACACAGTGGGTTAAGGGCATAGCAAAGTACATACACCAAGAGAA  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAACACAGTGGGTTAAGGGCATAGCAAAGTACATACACCAAGAGAA  1088

seq1  GGGGAGTCACTGAATTC  1109
      |||||||||||||||||
seq2  GGGGAGTCACTGAATTC  1105