BAC Information

Click to search

BAC

Clone NameB6Ng01-257A02
Chromosome7 (Build37)
Map Location 94,405,178 - 94,549,210
singlet/doubletdoublet
Overlap geneNox4
Upstream geneOlfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5, Ctsc, LOC100039756
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257A02.bB6Ng01-257A02.g
ACCGA062818GA062819
length1,038533
definitionB6Ng01-257A02.b B6Ng01-257A02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,405,178 - 94,406,216)(94,548,673 - 94,549,210)
sequence
gaattcagcagaggccagtaatagtactagtggttgtgaatatagtagac
atttactccaaagatgctttcctttgagaattagtcagcctgggaaaatg
tgagggaggctagtagtcctgtgatatgtcacaaagaccaaaagagttgc
tatggtctgttaatgtcatctgatggatatacttagcactttctttgtgc
agtcagagcaaagctgaatgtggaaagccaatcttctaacttatggtctg
tgttccttcatgttcatcatgctaagcattgtgtttgtcatataaataat
ttttaaaactgcagaaccaaatctggagaggaaataacattgtaatttct
tattaaagagaccgaaggttttaggatttctttgcagatgagattgaatc
atggcccaaacattgcattgcctttaggatttggataaactaatatactc
tgaaatgagatttaagttctgaagattcaatgaaaaaaagcaggtggaat
gcttagtatctggtacataagttcttagaaaatatagaaaatactgtttt
tattggatttcctctgtttctgttgttctgtctcccttttcatttatgat
tttattaatttggatattgcctcttggacctttagttagtttggctaagg
gtttatctatcttattgattctttcaaagaaccagcttttggttttggtg
attctttgtattgttttctttgtttctatttggttgatttcagctctgag
tttgagtatactcagtagaaggctctgccttctacttctcttggatgtgc
ttgcttctttttgttctagagctctcaggtgtgctgttaagttgttagtg
taagatctctccagttactttaccagggcacttagtgctatgaactttcc
tcttagcactgctttcattttatcccataagtttgggtatgatgtgtcaa
cactttttattaaattccaagatgtctttaatttatccaagaagtcttct
ttatttcttccttgttcagttataagtaaagagtcgtt
ctggtcttgaaggggatacgaactccataggaagaccatcagtcaactca
cctggacctttggggctctcagagtctgaacacccaaccaaagaacctac
aaggggtagacctaggtttctcaatacttatgtagaagattgcaacctgg
tcttcatgtgggttccaaaaatttggagtgaaggctatcccaaaagctgt
tgcctgtatatataagggatatgtccttcaacctgggctgccttgtctac
cctcagtgggagagataacatctagccttgcacagactggaaatgctagg
atggagatactcaggtagacctccacctgctccgaggaaaagtcgagggg
gaagtataaagattgtgagagggtgtgactgggaggggggcaatgagcag
gatataaagagaataattaaaaattaaaataaaaaataaaaatatttttt
aatataatgaacattatttaacatcagtgtaacaattatatctacctatc
aactgatgacaatgtcacctttttttctctaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94405178_94406216
seq2: B6Ng01-257A02.b_47_1084

seq1  GAATTCAGCAGAGGCCAGTAATAGTACTAGTGGTTGTGAATATAGTAGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCAGAGGCCAGTAATAGTACTAGTGGTTGTGAATATAGTAGAC  50

seq1  ATTTACTCCAAAGATGCTTTCCTTTGAGAATTAGTCAGCCTGGGAAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTCCAAAGATGCTTTCCTTTGAGAATTAGTCAGCCTGGGAAAATG  100

seq1  TGAGGGAGGCTAGTAGTCCTGTGATATGTCACAAAGACCAAAAGAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGAGGCTAGTAGTCCTGTGATATGTCACAAAGACCAAAAGAGTTGC  150

seq1  TATGGTCTGTTAATGTCATCTGATGGATATACTTAGCACTTTCTTTGTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTCTGTTAATGTCATCTGATGGATATACTTAGCACTTTCTTTGTGC  200

seq1  AGTCAGAGCAAAGCTGAATGTGGAAAGCCAATCTTCTAACTTATGGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAGCAAAGCTGAATGTGGAAAGCCAATCTTCTAACTTATGGTCTG  250

seq1  TGTTCCTTCATGTTCATCATGCTAAGCATTGTGTTTGTCATATAAATAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTCATGTTCATCATGCTAAGCATTGTGTTTGTCATATAAATAAT  300

seq1  TTTTAAAACTGCAGAACCAAATCTGGAGAGGAAATAACATTGTAATTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAACTGCAGAACCAAATCTGGAGAGGAAATAACATTGTAATTTCT  350

seq1  TATTAAAGAGACCGAAGGTTTTAGGATTTCTTTGCAGATGAGATTGAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGAGACCGAAGGTTTTAGGATTTCTTTGCAGATGAGATTGAATC  400

seq1  ATGGCCCAAACATTGCATTGCCTTTAGGATTTGGATAAACTAATATACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCCCAAACATTGCATTGCCTTTAGGATTTGGATAAACTAATATACTC  450

seq1  TGAAATGAGATTTAAGTTCTGAAGATTCAATGAAAAAAAGCAGGTGGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATGAGATTTAAGTTCTGAAGATTCAATGAAAAAAAGCAGGTGGAAT  500

seq1  GCTTAGTATCTGGTACATAAGTTCTTAGAAAATATAGAAAATACTGTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGTATCTGGTACATAAGTTCTTAGAAAATATAGAAAATACTGTTTT  550

seq1  TATTGGATTTCCTCTGTTTCTGTTGTTCTGTCTCCCTTTTCATTTATGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGATTTCCTCTGTTTCTGTTGTTCTGTCTCCCTTTTCATTTATGAT  600

seq1  TTTATTAATTTGGATATTGCCTCTTGGACCTTTAGTTAGTTTGGCTAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTAATTTGGATATTGCCTCTTGGACCTTTAGTTAGTTTGGCTAAGG  650

seq1  GTTTATCTATCTTATTGATTCTTTCAAAGAACCAGCTTTTGGTTTTGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTATCTTATTGATTCTTTCAAAGAACCAGCTTTTGGTTTTGGTG  700

seq1  ATTCTTTGTATTGTTTTCTTTGTTTCTATTTGGTTGATTTCAGCTCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGTATTGTTTTCTTTGTTTCTATTTGGTTGATTTCAGCTCTGAG  750

seq1  TTTGAGTATACTCAGTAGAAGGCTCTGCCTTCTACTTCTCTTGGATGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGTATACTCAGTAGAAGGCTCTGCCTTCTACTTCTCTTGGATGTGC  800

seq1  TTGCTTCTTTTTGTTCTAGAGCTCTCAGGTGTGCTGTTAAGTTGTTAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCTTTTTGTTCTAGAGCTCTCAGGTGTGCTGTTAAGTTGTTAGTG  850

seq1  TAAGATCTCTCCAGTTACTTTACCAGGGCACTTAGTGCTATGAACTTTCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATCTCTCCAGTTACTTTACCAGGGCACTTAGTGCTATGAACTTTCC  900

seq1  TCTTAGCACTGCTTTCATTTTATCCCATAAGTTTGGGTATGATGTGTCAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGCACTGCTTTCATTTTATCCCATAAGTTTGGGTATGATGTGTCAA  950

seq1  CAC-TTTTATTAAATTCCAAGATGTCTTTAATTTATTCCAAGAAGTCTTT  999
      ||| ||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  CACTTTTTATTAAATTCCAAGATGTCTTTAATTTA-TCCAAGAAGTC-TT  998

seq1  CTTTATTTCTTCCCTGTTCAAGTTAT-AGTAAAGAGTCGTT  1039
      ||||||||||||| ||||| |||||| ||||||||||||||
seq2  CTTTATTTCTTCCTTGTTC-AGTTATAAGTAAAGAGTCGTT  1038

seq1: chr7_94548673_94549210
seq2: B6Ng01-257A02.g_68_606 (reverse)

seq1  ATTAGAGAAAAAAAGGTGACATTGTCATCAGTTGATAGGTAGATATAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAGAAAAAAAGGTGACATTGTCATCAGTTGATAGGTAGATATAATT  50

seq1  GTTACACTGATGTTAAATAATGTTCATTATATT-AAAAATATTTTTATTT  99
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTTACACTGATGTTAAATAATGTTCATTATATTAAAAAATATTTTTATTT  100

seq1  TTTATTTTAATTTTTATTTATTCTCTTTATATCCTGCTCATTGCCCCCCT  149
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTATTTTAATTTTTAATTATTCTCTTTATATCCTGCTCATTGCCCCCCT  150

seq1  CCCAGTCACACCCTCTCACAATCTTTATACTTCCCCCTCGACTTTTCCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTCACACCCTCTCACAATCTTTATACTTCCCCCTCGACTTTTCCTC  200

seq1  GGAGCAGGTGGAGGTCTACCTGAGTATCTCCATCCTAGCATTTCCAGTCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGGTGGAGGTCTACCTGAGTATCTCCATCCTAGCATTTCCAGTCT  250

seq1  GTGCAAGGCTAGATGTTATCTCTCCCACTGAGGGTAGACAAGGCAGCCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGGCTAGATGTTATCTCTCCCACTGAGGGTAGACAAGGCAGCCCA  300

seq1  GGTTGAAGGACATATCCCTTATATATACAGGCAACAGCTTTTGGGATAGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAAGGACATATCCCTTATATATACAGGCAACAGCTTTTGGGATAGC  350

seq1  CTTCACTCCAAATTTTTGGAACCCACATGAAGACCAGGTTGCAATCTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTCCAAATTTTTGGAACCCACATGAAGACCAGGTTGCAATCTTCT  400

seq1  ACATAAGTATTGAGAAACCTAGGTCTACCCCTTGTAGGTTCTTTGGTTGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAAGTATTGAGAAACCTAGGTCTACCCCTTGTAGGTTCTTTGGTTGG  450

seq1  GTGTTCAGACTCTGAGAGCCCCAAAGGTCCAGGTGAGTTGACTGATGGTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCAGACTCTGAGAGCCCCAAAGGTCCAGGTGAGTTGACTGATGGTC  500

seq1  TTCCTATGGAGTTCGTATCCCCTTCAAGACCAGGAATTC  538
      |||||||||||||||||||||||||||||||||||||||
seq2  TTCCTATGGAGTTCGTATCCCCTTCAAGACCAGGAATTC  539