BAC Information

Click to search

BAC

Clone NameB6Ng01-257I08
Chromosome7 (Build37)
Map Location 134,418,291 - 134,518,092
singlet/doubletdoublet
Overlap geneItgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik
Upstream geneSbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2
Downstream gene9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72, LOC436010, EG668675, Itgam, Itgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257I08.bB6Ng01-257I08.g
ACCGA063199GA063200
length1,1281,102
definitionB6Ng01-257I08.b B6Ng01-257I08.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,418,291 - 134,419,416)(134,516,976 - 134,518,092)
sequence
gaattcagatccaggcaggggggtttgccaatgtctactgaaattataaa
tgctaaactcatagtagtggctttatgcctgtaattccaccatttgagag
actgagactgttaattccaggccagcctgtactacatagtactacatagt
gagttccaggccagcctgttctacagcttgcaaccctaaaccaaataaat
gaataggtttttccactgtgtgatcccagtacttggaaaactgtggtaag
aagacaatgatgtccattctagcctgggctccacagtgagatcttgtctc
aaaaagcctaaaataggtgctggagaggtaggtaggtggttaagagcgcc
tgctgttcttgcaaaggacctgggttcagttcctggaacttacatggtgg
ctatcatccgtaattccagtttccaggggacctgatgtccctcttctggc
ttctgagagcaccaggaacacacagttccctgtcaaacatatagccaaaa
cactcctacacatacaaaataaaagtaaatgaatctttgtattattgctg
tctttgatggtgcgtgtggctttccggggatgactgtgtagcttggctct
ccccaacctttacatggattcgtggaatctaagtgaagttgtcaagattt
tcacaactggatggtgtggcaaatgactttagccccagcacttgggagac
aaaggcaggaggatctccgtggagccctcttctggtctcctcacacacat
gtcatagagacagggtttctctgtggagccctggctgtcttggaactcac
tctgtagaccaggatggtcttaaactcacagaggtctccctgcctctgcc
tcccaactgctgggattaaaggggtgggccaccactgcctggcttaaaat
aaaacatttattttaaaggaagattatggggactgggaaagatggctcag
tggtttaagagcactgactgttctctagaggtcctgagtcaatttcccag
caaccacatggtggctcacaaccatctgtaatgggatctgaacaccttct
ttctggtgtgtctgagacgctacagtggactcatattagttactattacc
aatctttaaaaaaaaaaaatatggaaaa
gaattcaagccacggtcctaagggcagacaagcgtcacgggtgccatttg
tgtgggaagagttttgcccggcggtccacgttggaggcacacatgtacac
tcacacaggtgaaaagccgtttcagtgcccagactgcaacaaacgatttg
gccggtattcttccctgagcactcaccgagccatacaccgaggggaacgg
ccgcaccaatgtcctgactgtgggaagggttttacccagcggtgcacttt
ggtggcacacatgtactctcacacaggtgaaaagccgtttcagtgcccag
actgcaacaaatgcttcggcaggtattcctccctgagcatgcaccgagcc
atacaccgaggggaacggccacaccagtgtcctgactgtgggaagggttt
tacccagcggtgcgcattggtggagcacatgtactctcacacaggcgaaa
agtcattcaattgccctgattgctgcaagtcctttggtcggccatcttcc
ctgagcaggcaccgggccatacacctcgaggagcggcctcatcgctgctc
tcactgtggcaagacttttacacagcgctcttcactcaccagccatctcc
gtgtccacactggggagaagccttactgttgtgctgattgtggacgctgc
ttcagccagcgctctaggctccatgagcaccagcgagtggtacacagcgg
tgtgacccccttttcttgcactcactgtggcagtgcctttgcggattcca
aatatcttcggcgccacatgcgcatccatacaggtgagaagccttattca
tgccctgactggtcgctgcttttcgccagggcaccgaaattccagcccat
aggaggacccacactggcgagcgtccttacccctgccctcaatgtggcag
gcagtttcgcacaaagtcagctatgacaagctaccagtgggtccttagac
caggattaaaggccatatgacaaaagccagtcagttatctattattcctg
gacctagacagagaccggatccacctgtgggcttctagcataccagagta
tcaaaggtgcgggtgatgtctaaagcccaacataggagggtgatatgtac
at
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134418291_134419416
seq2: B6Ng01-257I08.b_45_1172

seq1  GAATTCAGATCCAGGCAGGGGGGTTTGCCAATGTCTACTGAAATTATAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGATCCAGGCAGGGGGGTTTGCCAATGTCTACTGAAATTATAAA  50

seq1  TGCTAAACTCATAGTAGTGGCTTTATGCCTGTAATTCCACCATTTGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAAACTCATAGTAGTGGCTTTATGCCTGTAATTCCACCATTTGAGAG  100

seq1  ACTGAGACTGTTAATTCCAGGCCAGCCTGTACTACATAGTACTACATAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGACTGTTAATTCCAGGCCAGCCTGTACTACATAGTACTACATAGT  150

seq1  GAGTTCCAGGCCAGCCTGTTCTACAGCTTGCAACCCTAAACCAAATAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTCCAGGCCAGCCTGTTCTACAGCTTGCAACCCTAAACCAAATAAAT  200

seq1  GAATAGGTTTTTCCACTGTGTGATCCCAGTACTTGGAAAACTGTGGTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGTTTTTCCACTGTGTGATCCCAGTACTTGGAAAACTGTGGTAAG  250

seq1  AAGACAATGATGTCCATTCTAGCCTGGGCTCCACAGTGAGATCTTGTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAATGATGTCCATTCTAGCCTGGGCTCCACAGTGAGATCTTGTCTC  300

seq1  AAAAAGCCTAAAATAGGTGCTGGAGAGGTAGGTAGGTGGTTAAGAGCGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCCTAAAATAGGTGCTGGAGAGGTAGGTAGGTGGTTAAGAGCGCC  350

seq1  TGCTGTTCTTGCAAAGGACCTGGGTTCAGTTCCTGGAACTTACATGGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTCTTGCAAAGGACCTGGGTTCAGTTCCTGGAACTTACATGGTGG  400

seq1  CTATCATCCGTAATTCCAGTTTCCAGGGGACCTGATGTCCCTCTTCTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCATCCGTAATTCCAGTTTCCAGGGGACCTGATGTCCCTCTTCTGGC  450

seq1  TTCTGAGAGCACCAGGAACACACAGTTCCCTGTCAAACATATAGCCAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAGCACCAGGAACACACAGTTCCCTGTCAAACATATAGCCAAAA  500

seq1  CACTCCTACACATACAAAATAAAAGTAAATGAATCTTTGTATTATTGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCTACACATACAAAATAAAAGTAAATGAATCTTTGTATTATTGCTG  550

seq1  TCTTTGATGGTGCGTGTGGCTTTCCGGGGATGACTGTGTAGCTTGGCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATGGTGCGTGTGGCTTTCCGGGGATGACTGTGTAGCTTGGCTCT  600

seq1  CCCCAACCTTTACATGGATTCGTGGAATCTAAGTGAAGTTGTCAAGATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAACCTTTACATGGATTCGTGGAATCTAAGTGAAGTTGTCAAGATTT  650

seq1  TCACAACTGGATGGTGTGGCAAATGACTTTAGCCCCAGCACTTGGGAGAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACTGGATGGTGTGGCAAATGACTTTAGCCCCAGCACTTGGGAGAC  700

seq1  AAAGGCAGGAGGATCTCCGTGGAGCCCTCTTCTGGTCTCCTCACACACAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGGAGGATCTCCGTGGAGCCCTCTTCTGGTCTCCTCACACACAT  750

seq1  GTCATAGAGACAGGGTTTCTCTGTGGAGCCCTGGCTGTCTTGGAACTCAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATAGAGACAGGGTTTCTCTGTGGAGCCCTGGCTGTCTTGGAACTCAC  800

seq1  TCTGTAGACCAGGATGGTCTTAAACTCACAGAGGTCTCCCTGCCTCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGACCAGGATGGTCTTAAACTCACAGAGGTCTCCCTGCCTCTGCC  850

seq1  TCCCAACTGCTGGGATTAAAGGGGTGGGCCACCACTGCCTGGCTTAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAACTGCTGGGATTAAAGGGGTGGGCCACCACTGCCTGGCTTAAAAT  900

seq1  AAAACATTTATTTAAAAGGAAGAATATGGGGACT-GGAAAGATGGCTCAG  949
      ||||||||||||| ||||||||| |||||||||| |||||||||||||||
seq2  AAAACATTTATTTTAAAGGAAGATTATGGGGACTGGGAAAGATGGCTCAG  950

seq1  TGG-TTAAGAGCACTGACTGTTCTTCTAGAGGTCCTGAGTTCAATTCCCA  998
      ||| ||||||||||||||||||| ||||||||||||||||  | ||||||
seq2  TGGTTTAAGAGCACTGACTGTTC-TCTAGAGGTCCTGAGTCAATTTCCCA  999

seq1  GCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTG-ACACCCTC  1047
      ||||||||||||||||||||||||||||||||||||||||| ||||| ||
seq2  GCAACCACATGGTGGCTCACAACCATCTGTAATGGGATCTGAACACCTTC  1049

seq1  -TTCTGGTGTGTCTGAAGACAGCTACAGTGGACTCATATAAG-TACAATA  1095
       |||||||||||||| |||| |||||||||||||||||| || ||| || 
seq2  TTTCTGGTGTGTCTG-AGAC-GCTACAGTGGACTCATATTAGTTACTATT  1097

seq1  AACAAATCTTAAAAAAAAAAAAAAAGGAAAA  1126
      | |||   |||||||||||||| | ||||||
seq2  ACCAATCTTTAAAAAAAAAAAATATGGAAAA  1128

seq1: chr7_134516976_134518092
seq2: B6Ng01-257I08.g_68_1169 (reverse)

seq1  ATGTACATATTTCACCCT-CTATGTTGGCGCCTTTAAGACCATCACCCGC  49
      |||||||||  ||||||| ||||||||| ||  || ||| ||||||||||
seq2  ATGTACATA--TCACCCTCCTATGTTGG-GC--TTTAGA-CATCACCCGC  44

seq1  ACTTTTGGAATAACTCTGGGTAATGCTAGAAGCCCACAGGTGGATCCGGG  99
      || ||||  || |||||||   ||||||||||||||||||||||||||| 
seq2  ACCTTTG--AT-ACTCTGG--TATGCTAGAAGCCCACAGGTGGATCCGG-  88

seq1  TCCTCT-TGTCTAGGGTCCAGGGAT-ATAGATAACTGACTGGCTTTTTTG  147
         ||| |||||| |||||||| || ||||||||||||||||||||| | 
seq2  ---TCTCTGTCTA-GGTCCAGGAATAATAGATAACTGACTGGCTTTTGT-  133

seq1  TCCTTATGGCCTTTAATCCTGGTCTAAGGACCCACTGGTAGCTTGTCATA  197
        | ||||||||||||||||||||||||||||||||||||||||||||||
seq2  --CATATGGCCTTTAATCCTGGTCTAAGGACCCACTGGTAGCTTGTCATA  181

seq1  GCTGACTTTGTGCGAAACTGCCTGCCACATTGAGGGCAGGGGTAAGGACG  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTTTGTGCGAAACTGCCTGCCACATTGAGGGCAGGGGTAAGGACG  231

seq1  CTCGCCAGTGTGGGTCCTCCTATGGGCTGGAATTTCGGTGCCCTGGCG-A  296
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CTCGCCAGTGTGGGTCCTCCTATGGGCTGGAATTTCGGTGCCCTGGCGAA  281

seq1  AAGCAGCGACCAGTCAGGGCATGAATAAGGCTTCTCACCTGTATGGATGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCGACCAGTCAGGGCATGAATAAGGCTTCTCACCTGTATGGATGC  331

seq1  GCATGTGGCGCCGAAGATATTTGGAATCCGCAAAGGCACTGCCACAGTGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGGCGCCGAAGATATTTGGAATCCGCAAAGGCACTGCCACAGTGA  381

seq1  GTGCAAGAAAAGGGGGTCACACCGCTGTGTACCACTCGCTGGTGCTCATG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAGAAAAGGGGGTCACACCGCTGTGTACCACTCGCTGGTGCTCATG  431

seq1  GAGCCTAGAGCGCTGGCTGAAGCAGCGTCCACAATCAGCACAACAGTAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTAGAGCGCTGGCTGAAGCAGCGTCCACAATCAGCACAACAGTAAG  481

seq1  GCTTCTCCCCAGTGTGGACACGGAGATGGCTGGTGAGTGAAGAGCGCTGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTCCCCAGTGTGGACACGGAGATGGCTGGTGAGTGAAGAGCGCTGT  531

seq1  GTAAAAGTCTTGCCACAGTGAGAGCAGCGATGAGGCCGCTCCTCGAGGTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAAGTCTTGCCACAGTGAGAGCAGCGATGAGGCCGCTCCTCGAGGTG  581

seq1  TATGGCCCGGTGCCTGCTCAGGGAAGATGGCCGACCAAAGGACTTGCAGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCCGGTGCCTGCTCAGGGAAGATGGCCGACCAAAGGACTTGCAGC  631

seq1  AATCAGGGCAATTGAATGACTTTTCGCCTGTGTGAGAGTACATGTGCTCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGGGCAATTGAATGACTTTTCGCCTGTGTGAGAGTACATGTGCTCC  681

seq1  ACCAATGCGCACCGCTGGGTAAAACCCTTCCCACAGTCAGGACACTGGTG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGCGCACCGCTGGGTAAAACCCTTCCCACAGTCAGGACACTGGTG  731

seq1  TGGCCGTTCCCCTCGGTGTATGGCTCGGTGCATGCTCAGGGAGGAATACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCGTTCCCCTCGGTGTATGGCTCGGTGCATGCTCAGGGAGGAATACC  781

seq1  TGCCGAAGCATTTGTTGCAGTCTGGGCACTGAAACGGCTTTTCACCTGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGAAGCATTTGTTGCAGTCTGGGCACTGAAACGGCTTTTCACCTGTG  831

seq1  TGAGAGTACATGTGTGCCACCAAAGTGCACCGCTGGGTAAAACCCTTCCC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTACATGTGTGCCACCAAAGTGCACCGCTGGGTAAAACCCTTCCC  881

seq1  ACAGTCAGGACATTGGTGCGGCCGTTCCCCTCGGTGTATGGCTCGGTGAG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTCAGGACATTGGTGCGGCCGTTCCCCTCGGTGTATGGCTCGGTGAG  931

seq1  TGCTCAGGGAAGAATACCGGCCAAATCGTTTGTTGCAGTCTGGGCACTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAGGGAAGAATACCGGCCAAATCGTTTGTTGCAGTCTGGGCACTGA  981

seq1  AACGGCTTTTCACCTGTGTGAGTGTACATGTGTGCCTCCAACGTGGACCG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGGCTTTTCACCTGTGTGAGTGTACATGTGTGCCTCCAACGTGGACCG  1031

seq1  CCGGGCAAAACTCTTCCCACACAAATGGCACCCGTGACGCTTGTCTGCCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGCAAAACTCTTCCCACACAAATGGCACCCGTGACGCTTGTCTGCCC  1081

seq1  TTAGGACCGTGGCTTGAATTC  1117
      |||||||||||||||||||||
seq2  TTAGGACCGTGGCTTGAATTC  1102