BAC Information

Click to search

BAC

Clone NameB6Ng01-257K11
Chromosome7 (Build37)
Map Location 108,721,644 - 108,830,894
singlet/doubletdoublet
Overlap geneEG630138, Art2b, Clpb
Upstream geneMrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996, Fchsd2, EG622673, Atg16l2, Stard10, Centd2, Pde2a, Art2a
Downstream genePhox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257K11.bB6Ng01-257K11.g
ACCGA063297GA063298
length1,1891,024
definitionB6Ng01-257K11.b B6Ng01-257K11.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(108,829,714 - 108,830,894)(108,721,644 - 108,722,673)
sequence
gaattcagtatcttcttctgacctccagaagaaacacacacacacacaca
cacacacacacacaggcaaaacaatcacataataaagataaataagccta
aattattaaaaaaaaatacatatagcaccaaaataaaaactgagaaatag
attcccagcagacctgacccagtaagacatctaaaagggtaattccttcg
gcttgggtgcttgcaggaaggaagaagtcctaggcaggcagatgcacatt
taagtcatttaggactagctcttctcagggaaagaaagaagacaccacct
cacttttcttcctttttctttatgaccaatcaatacaaagcggccagcga
acttcaatcaagcattgttccaactgatttccggatcttttgcaggaact
ggccctcagctgcaaccagggaggggctgaagagtggggagctctgtccc
acctgcatcagaggcctggaagcactgagccatgcagacccaatcatgat
cactatctgggcaacaggaccctggttggagccgcccagaaggccctgtt
tacagtaataacagcaccaggccctctgtctgagcagagacaaggcgcct
agggctagaatccccaggcagcctccatctgtgccttatctctcagctag
ccagggacaggggggtacggagaggacagcaaaggctgtttgttcttaga
ccccagtctgggcctacagatttcaaggtaaaggtctacattatttctga
ctgcacaggcacagagcccctttggcctcttctgcattgcctatttaaat
tgagcaccagcctcttaggctcagctcagaccctctcctcaaggaagccc
tccaggtgcctttgttttcactcttacacctggcaacctcaggaaagcaa
gtgaataatgagagaatggagactggtatatgcaaagcacccacaactca
gatgagtgaatctgcacacttcatcctgagcctttcctactagttagttt
cagtgttttggaggtaatgactgccctgcagaatcacagcccaatcttaa
acacacacagaatgagctgcttcaccaaggcctcctctgggaaagacgga
accagataggagcctgacctcttaccctctacctctgcctctgccctggc
tgtgttggcgtgtggaacagtctttttagagcctttctc
gaattcccatgggagaatgagtggaaagcaagacaactaaaatccaggcc
atctttgcatcaagaagatttacatgtgcagcatgtaatttcttttctac
cagagccaattccctttcttgcctcggctgataattttcttggactattt
aagtctttaacacttgtaaggtttgaaacaaattaccttgctcttgagta
gttaatctaaatataagttgtgaccagttaatatctcccagcaatttttg
gaaatcattaagagttcttttttttttttttttttttttaacatacgaag
ctgtttaattaggttaacaatttagaagaccagtttgtgagagacatccc
gtttgtcagggagaactgagatcgcaggtagccctggagctgaggaacag
ctttaatctttggcagaatctgcaaatccacagctttctggtcagccttt
cgctgctctgtaatctcgtatttctcctccgtgtcgaagatctcgccctc
ctgatgtctgggcctcgcagctgcttcttcttgaagtaagcgtcagtcag
gtgtttggggattttaacatcgctgatatcaacttttgtagaggtggcaa
tgacaaacttctggtgtgttctgcgcagaggaactctgttgatgacaaga
ggcccagtcacaagcagcaagccactgtccagctgcttcaggaaaaccac
tctcttgcccctgtggcgcccagtgaggatgatcaggacagtccgggagt
gatgctggagcgtagccatctcacatgctggctgaagggcttcttgtcat
ggctcagcagcttccgaggaacatctttcgtgggataatacctaggcatt
tttcgaagcttcaccaccccggtgccaccgttcttgtcccccaccaactg
ttttggtgacagtagcaagaccttcctcttttttcttcttctcaccttgg
acttgcagccgagtattccttttgtacagtcttcctggagtacatagcag
acgggagtacctgacattcctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_108829714_108830894
seq2: B6Ng01-257K11.b_47_1235 (reverse)

seq1  GAGAGAGGCTCTAAAAAGACCTGTCCACA-GC--ACACAGCCA-GGCAGA  46
      |||| |||||||||||||||   |||||| ||  ||||||||| ||||||
seq2  GAGAAAGGCTCTAAAAAGACTGTTCCACACGCCAACACAGCCAGGGCAGA  50

seq1  GGCAGAGGTAGAGG--TAGA-GTCAGGCTCCTATCTGGTTCCGTCCTTTC  93
      ||||||||||||||   ||| ||||||||||||||||||||||| |||||
seq2  GGCAGAGGTAGAGGGTAAGAGGTCAGGCTCCTATCTGGTTCCGT-CTTTC  99

seq1  CCAGA-GAGG-CTTGGTGAAGCAGCTCA-TCTGTGTGT-TTAAAGATTGG  139
      ||||| |||| ||||||||||||||||| ||||||||| || ||||||||
seq2  CCAGAGGAGGCCTTGGTGAAGCAGCTCATTCTGTGTGTGTTTAAGATTGG  149

seq1  GCTGTTGATTCTGCAGGGCAGTCATTACCTTCCAAAACACTGAAACTAAC  189
      |||| |||||||||||||||||||||||| ||||||||||||||||||||
seq2  GCTG-TGATTCTGCAGGGCAGTCATTACC-TCCAAAACACTGAAACTAAC  197

seq1  TAGTAGGAAAGGCTCAGGATGAAGTGTGCAGATTCACTCATCTGAGTTGT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGAAAGGCTCAGGATGAAGTGTGCAGATTCACTCATCTGAGTTGT  247

seq1  GGGTGCTTTGCATATACCAGTCTCCATTCTCTCATTATTCACTTGCTTTC  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCTTTGCATATACCAGTCTCCATTCTCTCATTATTCACTTGCTTTC  297

seq1  CTGAGGTTGCCAGGTGTAAGAGTGAAAACAAAGGCACCTGGAGGGCTTCC  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTTGCCAGGTGTAAGAGTGAAAACAAAGGCACCTGGAGGGCTTCC  347

seq1  TTGAGGAGAGGGTCTGAGCTGAGCCTAAGAGGCTGGTGCTCAATTTAAAT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGAGAGGGTCTGAGCTGAGCCTAAGAGGCTGGTGCTCAATTTAAAT  397

seq1  AGGCAATGCAGAAGAGGCCAAAGGGGCTCTGTGCCTGTGCAGTCAGAAAT  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAATGCAGAAGAGGCCAAAGGGGCTCTGTGCCTGTGCAGTCAGAAAT  447

seq1  AATGTAGACCTTTACCTTGAAATCTGTAGGCCCAGACTGGGGTCTAAGAA  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGACCTTTACCTTGAAATCTGTAGGCCCAGACTGGGGTCTAAGAA  497

seq1  CAAACAGCCTTTGCTGTCCTCTCCGTACCCCCCTGTCCCTGGCTAGCTGA  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGCCTTTGCTGTCCTCTCCGTACCCCCCTGTCCCTGGCTAGCTGA  547

seq1  GAGATAAGGCACAGATGGAGGCTGCCTGGGGATTCTAGCCCTAGGCGCCT  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAAGGCACAGATGGAGGCTGCCTGGGGATTCTAGCCCTAGGCGCCT  597

seq1  TGTCTCTGCTCAGACAGAGGGCCTGGTGCTGTTATTACTGTAAACAGGGC  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTGCTCAGACAGAGGGCCTGGTGCTGTTATTACTGTAAACAGGGC  647

seq1  CTTCTGGGCGGCTCCAACCAGGGTCCTGTTGCCCAGATAGTGATCATGAT  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGGGCGGCTCCAACCAGGGTCCTGTTGCCCAGATAGTGATCATGAT  697

seq1  TGGGTCTGCATGGCTCAGTGCTTCCAGGCCTCTGATGCAGGTGGGACAGA  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGCATGGCTCAGTGCTTCCAGGCCTCTGATGCAGGTGGGACAGA  747

seq1  GCTCCCCACTCTTCAGCCCCTCCCTGGTTGCAGCTGAGGGCCAGTTCCTG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCCACTCTTCAGCCCCTCCCTGGTTGCAGCTGAGGGCCAGTTCCTG  797

seq1  CAAAAGATCCGGAAATCAGTTGGAACAATGCTTGATTGAAGTTCGCTGGC  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATCCGGAAATCAGTTGGAACAATGCTTGATTGAAGTTCGCTGGC  847

seq1  CGCTTTGTATTGATTGGTCATAAAGAAAAAGGAAGAAAAGTGAGGTGGTG  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTTTGTATTGATTGGTCATAAAGAAAAAGGAAGAAAAGTGAGGTGGTG  897

seq1  TCTTCTTTCTTTCCCTGAGAAGAGCTAGTCCTAAATGACTTAAATGTGCA  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTTCTTTCCCTGAGAAGAGCTAGTCCTAAATGACTTAAATGTGCA  947

seq1  TCTGCCTGCCTAGGACTTCTTCCTTCCTGCAAGCACCCAAGCCGAAGGAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTGCCTAGGACTTCTTCCTTCCTGCAAGCACCCAAGCCGAAGGAA  997

seq1  TTACCCTTTTAGATGTCTTACTGGGTCAGGTCTGCTGGGAATCTATTTCT  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCCTTTTAGATGTCTTACTGGGTCAGGTCTGCTGGGAATCTATTTCT  1047

seq1  CAGTTTTTATTTTGGTGCTATATGTATTTTTTTTTAATAATTTAGGCTTA  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTTTATTTTGGTGCTATATGTATTTTTTTTTAATAATTTAGGCTTA  1097

seq1  TTTATCTTTATTATGTGATTGTTTTGCCTGTGTGTGTGTGTGTGTGTGTG  1139
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATCTTTATTATGTGATTGTTTTGCCTGTGTGTGTGTGTGTGTGTGTG  1147

seq1  TGTGTGTGTTTCTTCTGGAGGTCAGAAGAAGATACTGAATTC  1181
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTTTCTTCTGGAGGTCAGAAGAAGATACTGAATTC  1189

seq1: chr7_108721644_108722673
seq2: B6Ng01-257K11.g_67_1090

seq1  GAATTCCCATGGGAGAATGAGTGGAAAGCAAGACAACTAAAATCCAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATGGGAGAATGAGTGGAAAGCAAGACAACTAAAATCCAGGCC  50

seq1  ATCTTTGCATCAAGAAGATTTACATGTGCAGCATGTAATTTCTTTTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGCATCAAGAAGATTTACATGTGCAGCATGTAATTTCTTTTCTAC  100

seq1  CAGAGCCAATTCCCTTTCTTGCCTCGGCTGATAATTTTCTTGGACTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCAATTCCCTTTCTTGCCTCGGCTGATAATTTTCTTGGACTATTT  150

seq1  AAGTCTTTAACACTTGTAAGGTTTGAAACAAATTACCTTGCTCTTGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTTTAACACTTGTAAGGTTTGAAACAAATTACCTTGCTCTTGAGTA  200

seq1  GTTAATCTAAATATAAGTTGTGACCAGTTAATATCTCCCAGCAATTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATCTAAATATAAGTTGTGACCAGTTAATATCTCCCAGCAATTTTTG  250

seq1  GAAATCATTAAGAGTTCTTTTTTTTTTTTTTTTTTTTTTAACATACGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCATTAAGAGTTCTTTTTTTTTTTTTTTTTTTTTTAACATACGAAG  300

seq1  CTGTTTAATTAGGTTAACAATTTAGAAGACCAGTTTGTGAGAGACATCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAATTAGGTTAACAATTTAGAAGACCAGTTTGTGAGAGACATCCC  350

seq1  GTTTGTCAGGGAGAACTGAGATCGCAGGTAGCCCTGGAGCTGAGGAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCAGGGAGAACTGAGATCGCAGGTAGCCCTGGAGCTGAGGAACAG  400

seq1  CTTTAATCTTTGGCAGAATCTGCAAATCCACAGCTTTCTGGTCAGCCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAATCTTTGGCAGAATCTGCAAATCCACAGCTTTCTGGTCAGCCTTT  450

seq1  CGCTGCTCTGTAATCTCGTATTTCTCCTCCGTGTCGAAGATCTCGCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGCTCTGTAATCTCGTATTTCTCCTCCGTGTCGAAGATCTCGCCCTC  500

seq1  CTGATGTCTGGGCCTCGCAGCTGCTTCTTCTTGAAGTAAGCGTCAGTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGTCTGGGCCTCGCAGCTGCTTCTTCTTGAAGTAAGCGTCAGTCAG  550

seq1  GTGTTTGGGGATTTTAACATCGCTGATATCAACTTTTGTAGAGGTGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTGGGGATTTTAACATCGCTGATATCAACTTTTGTAGAGGTGGCAA  600

seq1  TGACAAACTTCTGGTGTGTTCTGCGCAGAGGAACTCTGTTGATGACAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAACTTCTGGTGTGTTCTGCGCAGAGGAACTCTGTTGATGACAAGA  650

seq1  GGCCCAGTCACAAGCAGCAAGCCACTGTCCAGCTGCTTCAGGAAAACCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGTCACAAGCAGCAAGCCACTGTCCAGCTGCTTCAGGAAAACCAC  700

seq1  TCTCTTGCCCCTGTGGCGCCCAGTGAGGATGATCAGGACAGTCCGGGAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGCCCCTGTGGCGCCCAGTGAGGATGATCAGGACAGTCCGGGAGT  750

seq1  GATGCTGGAGCGTAGCCATCTCACATGCTGGCTGAAGGGCTTCTTGTCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTGGAGCGTAGCCATCTCACATGCTGGCTGAAGGGCTTCTTGTCAT  800

seq1  GGCTCAGCAGCTTCCGAGGAACATCTTCGGTGGGATAATACCTAGGCATT  850
      |||||||||||||||||||||||||||  |||||||||||||||||||||
seq2  GGCTCAGCAGCTTCCGAGGAACATCTTTCGTGGGATAATACCTAGGCATT  850

seq1  TTTCGAAGCTTCACCACCCGGGTGCCACCGTTCTTGT-CCCCACCAACTG  899
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  TTTCGAAGCTTCACCACCCCGGTGCCACCGTTCTTGTCCCCCACCAACTG  900

seq1  TTTTGGTGACAGTAGCAAGGACCTT-CTCTTTTTTCTTCTTCTCAACCTT  948
      |||||||||||||||||| |||||| |||||||||||||||||| |||||
seq2  TTTTGGTGACAGTAGCAA-GACCTTCCTCTTTTTTCTTCTTCTC-ACCTT  948

seq1  GGACTTGGCAGCCGAGTATTTCCTTTTGTACAGGGCCTTCCTGGAGTACA  998
      |||||| ||||||||||| |||||||||||||  | ||||||||||||||
seq2  GGACTT-GCAGCCGAGTA-TTCCTTTTGTACA--GTCTTCCTGGAGTACA  994

seq1  TAGCAGAACGGGAGTACCTGACAATTCCTCTC  1030
      |||||| ||||||||||||||| |||||||||
seq2  TAGCAG-ACGGGAGTACCTGAC-ATTCCTCTC  1024