BAC Information

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BAC

Clone NameB6Ng01-257P21
Chromosome7 (Build37)
Map Location 113,743,665 - 113,744,752
singlet/doubletsinglet
Overlap geneGm1966
Upstream geneHpxn, Trim3, Arfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139
Downstream geneLOC100042141, Olfr693, Olfr694, Olfr695, Olfr696-ps1, Olfr697, Olfr698, Olfr699, Olfr700, Olfr701, Olfr702, Olfr703, Olfr704, Olfr705, Olfr706, Olfr707, Olfr708, Olfr709-ps1, Olfr710, LOC384651, Olfr6, Olfr711, GA_x5J8B7W6B6J-1784824-1783474, Olfr2, Olfr713, Olfr714, Olfr17, Olfr715, Olfr716, Nlrp14, LOC100042278, 1700012H05Rik, Syt9, Olfml1, Ppfibp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257P21.bB6Ng01-257P21.g
ACCGA063548GA063549
length1,084969
definitionB6Ng01-257P21.b B6Ng01-257P21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgtcttttttacaccaaaggtgccaaagttgtccttgaaggg
gtagtaaattttcttttatctgagataacttgtattcctccaggaggacc
attatactctgagccttttctttagcttccttgcagtctctctggtcttc
atcaataaggaatccttgttctcgagctgtctgtgaacagtcctctaaac
tgagagcagtgttagagagcactagaaaatgtttgatggctttggtgagc
tcctctgttaattctgcctcatttctattcttgatgccaattttcattct
tttaccagaaatatttgctatggccttttctttgtcatcaatcaagcaga
tcaaaggtgttgatgactgacagaggtgtctgacaagctcttggttttct
ttattgttatcagaagttgacatgaggatcacaatgatagaagagacatc
ttggaggaaactgagttgttggctatgttccttggcatctccatgaagat
tggtgaacatcagacacttgtcaaacatgtcctcaccttggccagctgga
cagaaccagcagatttccaccactccctgcatcaggagacagtgtttgtt
gcttcctctgcagtgtctgtgaaaaaacacatcatgtttacgtttactga
gaagagagttcatgatctgagatttggaagcagagaggccgtttccaact
ctaatgaaggacacaatgggggtagagacacgacacatctgctgatttct
gtgactgtagctcttgtcctgtggagatttacttgcatcttgccaatttt
tcctaatttgtctgagagaccagagacaaaattcaacctgagaagtgttg
ggatttggtaccacaagagggagtgcatattgacaaatggaaagcttgga
caaaatatattgcctggtatgatcatctgcacagtgtaaaatggcatctg
gaatatccattgggtgaatgtgggggcagacctcagtgtctgaaagatag
ccagactgtcaattgtctttatgacatcctcatatggatcaaagtcttca
atttcatgaatggagacctatgggatctgttttt
gaattcagtaagaaggttacctattcagtaacattcaaatttacttatag
tagagaggtgaaactaattaggcattacaaagaatagagccataatagct
caggactggtctgcagagtgtttacttgggacaatagccagtcttaccca
gacaagggaatctacaatggcctagcgaataggtgtgtttaccatgaaag
agttagggaatccctctgagataggtttcttcactaggcccaaagaaaca
gcataaatcaggcatttactaagaacccctggtggtgggtttaacaatag
actagcattacacctggctccattcttagaggtaaacagcagcacctggt
tcctgacatcttttgatgtatacattccttatattttgtgtcactgtact
tggcggatgtatctcgcctggtttcttattattattctgtataaaaagtt
ttgatgctcgacttgacattacattcatattctacacaatctcctgtgtt
gtgtctgtatgtcattcactcggccgactccttgtccacctgtaaccaga
gacccattctatgcagacaagggaccaagagggtctgaggcagagactaa
aggagctaaggggttttgcagccccatggagggagcaacagtgtcagcag
gtcagagtcaccagggctcccaggaactggaccaccaaccaaagaataca
catggaggaaaccttggctctggctgcacaaatggcagagggtgacctta
ttggacatcagtgggaggagaggcccttgggcctgaggctgtttgattca
ccagtgtagggaaatgccaggagggaagacaagggtaggtgggtaggtag
ggtagcaccttcacaggggcgggggaaggggaatgagacaggggatttct
gaaaaggagaactggaaagaggaaacttttgaaatataaataaagtatat
aatatatgcgcgtgtgata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_113743665_113744752
seq2: B6Ng01-257P21.b_48_1131

seq1  GAATTCTTTGTCTTTTTTACACCAAAGGTGCCAAAGTTGTCCTTGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCTTTTTTACACCAAAGGTGCCAAAGTTGTCCTTGAAGGG  50

seq1  GTAGTAAATTTTCTTTTATCTGAGATAACTTGTATTCCTCCAGGAGGACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTAAATTTTCTTTTATCTGAGATAACTTGTATTCCTCCAGGAGGACC  100

seq1  ATTATACTCTGAGCCTTTTCTTTAGCTTCCTTGCAGTCTCTCTGGTCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACTCTGAGCCTTTTCTTTAGCTTCCTTGCAGTCTCTCTGGTCTTC  150

seq1  ATCAATAAGGAATCCTTGTTCTCGAGCTGTCTGTGAACAGTCCTCTAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATAAGGAATCCTTGTTCTCGAGCTGTCTGTGAACAGTCCTCTAAAC  200

seq1  TGAGAGCAGTGTTAGAGAGCACTAGAAAATGTTTGATGGCTTTGGTGAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGCAGTGTTAGAGAGCACTAGAAAATGTTTGATGGCTTTGGTGAGC  250

seq1  TCCTCTGTTAATTCTGCCTCATTTCTATTCTTGATGCCAATTTTCATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTGTTAATTCTGCCTCATTTCTATTCTTGATGCCAATTTTCATTCT  300

seq1  TTTACCAGAAATATTTGCTATGGCCTTTTCTTTGTCATCAATCAAGCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACCAGAAATATTTGCTATGGCCTTTTCTTTGTCATCAATCAAGCAGA  350

seq1  TCAAAGGTGTTGATGACTGACAGAGGTGTCTGACAAGCTCTTGGTTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGGTGTTGATGACTGACAGAGGTGTCTGACAAGCTCTTGGTTTTCT  400

seq1  TTATTGTTATCAGAAGTTGACATGAGGATCACAATGATAGAAGAGACATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGTTATCAGAAGTTGACATGAGGATCACAATGATAGAAGAGACATC  450

seq1  TTGGAGGAAACTGAGTTGTTGGCTATGTTCCTTGGCATCTCCATGAAGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGAAACTGAGTTGTTGGCTATGTTCCTTGGCATCTCCATGAAGAT  500

seq1  TGGTGAACATCAGACACTTGTCAAACATGTCCTCACCTTGGCCAGCTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAACATCAGACACTTGTCAAACATGTCCTCACCTTGGCCAGCTGGA  550

seq1  CAGAACCAGCAGATTTCCACCACTCCCTGCATCAGGAGACAGTGTTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACCAGCAGATTTCCACCACTCCCTGCATCAGGAGACAGTGTTTGTT  600

seq1  GCTTCCTCTGCAGTGTCTGTGAAAAAACACATCATGTTTACGTTTACTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCTCTGCAGTGTCTGTGAAAAAACACATCATGTTTACGTTTACTGA  650

seq1  GAAGAGAGTTCATGATCTGAGATTTGGAAGCAGAGAGGCCGTTTCCAACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGAGTTCATGATCTGAGATTTGGAAGCAGAGAGGCCGTTTCCAACT  700

seq1  CTAATGAAGGACACAATGGGGGTAGAGACACGACACATCTGCTGATTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAAGGACACAATGGGGGTAGAGACACGACACATCTGCTGATTTCT  750

seq1  GTGACTGTAGCTCTTGTCCTGTGGAGATTTACTTGCATCTTGCCAATTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTAGCTCTTGTCCTGTGGAGATTTACTTGCATCTTGCCAATTTT  800

seq1  TCCTAATTTGTCTGAGAGACCAGAGACAAAATTCAACCTGAGAAGTGTTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATTTGTCTGAGAGACCAGAGACAAAATTCAACCTGAGAAGTGTTG  850

seq1  GGATTTGGTACCACAAGAGGGAGTGCATATTGACAAATGGAAAGCTTGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTGGTACCACAAGAGGGAGTGCATATTGACAAATGGAAAGCTTGGA  900

seq1  CAAAATATATTGCCTGGTATGATCATCTGCACAGTGTAAAATGGCCATCT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CAAAATATATTGCCTGGTATGATCATCTGCACAGTGTAAAATGG-CATCT  949

seq1  GG-ATATCCATTGGGTGAATGTGGGGCCAGGACTCAGTGTCTGAAAGATA  999
      || ||||||||||||||||||||||| |||  ||||||||||||||||||
seq2  GGAATATCCATTGGGTGAATGTGGGGGCAGACCTCAGTGTCTGAAAGATA  999

seq1  GCCAGGACTGTC-ATTGTCTTTAATGACATCCTCATATGGATCAAAGTCT  1048
      |||| ||||||| ||||||||| |||||||||||||||||||||||||||
seq2  GCCA-GACTGTCAATTGTCTTT-ATGACATCCTCATATGGATCAAAGTCT  1047

seq1  TCATTTTCATGATTGGAGGACCCTATGGAGATCTGTTTTT  1088
      ||| |||||||| |||||   ||||||| |||||||||||
seq2  TCAATTTCATGAATGGAG--ACCTATGG-GATCTGTTTTT  1084