BAC Information

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BAC

Clone NameB6Ng01-258B15
Chromosome7 (Build37)
Map Location 6,915,334 - 6,916,526
singlet/doubletsinglet
Overlap geneUsp29
Upstream geneLOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, LOC627961
Downstream geneAurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258B15.bB6Ng01-258B15.g
ACCGA063627GA063628
length6121,172
definitionB6Ng01-258B15.b B6Ng01-258B15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcccttgtctgggtaagactgactattgtcccaagtaaacattctg
cagaccagccctgagctattcctgctccgttctttgtaatgcctaattag
tttcaccatctctattagaagtaaatttgaatgttactgaatagataacc
ttcttactgaatttctactgaattccaagtttgtcgacttcaaggatttt
ctatgaagttggaacactggtgaaggcttagctatgtcagaattcaatct
ttaaaggcacttataataaaataatactaaaagagaacatgtggatccat
acaccaggctaacgctgggatagggtatgaatatacggattatgagaatg
cctggttccaggaggttgagtttccttgaaactccctgcctcatgcgtgc
ttccaggcctctcggcctgtcaagcagacttcactggagtgtgcatagca
ttgattgaatcacatttggttcttcctccctttttttcctctggatgcac
tctgatgataccatggctaccccatttgagctctgtttaaataaatattg
tcctttcatgatgatgaagaagaaggaggaggaggaggagatgaaggagg
aggaggagaagg
gaattctgttctcaagtacacattgaggagactccccagggtcctcattg
ttcatctgaaacgctaccaagttaccactgacttgttgccagtgaagagt
gagcagccagttgagatttctaagtatttaaatatatcttcccactgcca
tgaaaacaggaagctaccatttcccttggctaatacatccccagatgtct
ctcaagggatgatgcctgggatcttcaaccagtcaatgttatctaagaag
gtgatttcagaatcctgtgaccccatggttctacaggttggatccagtgt
ggatgctgaaatacaaagcttccagataatgtatgaggatgaagatgcaa
gtgaggagcagcagcagagaggcctggaaagtggctccatgctggagcca
gaactagtgaagacagaaaaccggatactcagacaaaagacatcactagc
aactgactcaatgatgggtgacggatacagcttccttcctatgctctgtg
agcctctgagcatccaagatccaggtcttgcagagatgggtcttcaagag
gttccagagaatccagaatttaagaactatgagaaaattaacatatatgg
aaagtcagatggccgcactaacactgagttgtcaaaactctaccagaatc
atggaagtcgaatcaagggtttgttcctaccggcatcccttgcaagtgtt
agttctcaggaagacccagagaaggacctgagtaggtctccagaattgca
ggaagatgacccacattcctttgcatttggttctgatgattccaaagatg
gggagatgggagatgatcttcagaattacaggctcgtcagtgtggtcagc
cactttgggagctccccaaattcagccattacgtaagtgatgtgtatgac
tttcaaaagcaagcctggctcctttacagtgatgtccaagtgttcgagag
ttcagatccctccattcagagacagctaaacagcggatacatcttctttt
acatgcatatgagatttttgagactgttgaaaatcatctggagtgcagtc
cttagccacatctagagaaaagagggaaatagattacttctcacatgcct
aacgctaacatacatctgagattcaatctgcttaatggagaaagattcac
atagtcttcagagatgaaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6915334_6916526
seq2: B6Ng01-258B15.g_65_1236

seq1  GAATTCTGTTCTCAAGTACACATTGAGGAGACTCCCCAGGGTCCTCATTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTTCTCAAGTACACATTGAGGAGACTCCCCAGGGTCCTCATTG  50

seq1  TTCATCTGAAACGCTACCAAGTTACCACTGACTTGTTGCCAGTGAAGAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTGAAACGCTACCAAGTTACCACTGACTTGTTGCCAGTGAAGAGT  100

seq1  GAGCAGCCAGTTGAGATTTCTAAGTATTTAAATATATCTTCCCACTGCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCCAGTTGAGATTTCTAAGTATTTAAATATATCTTCCCACTGCCA  150

seq1  TGAAAACAGGAAGCTACCATTTCCCTTGGCTAATACATCCCCAGATGTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACAGGAAGCTACCATTTCCCTTGGCTAATACATCCCCAGATGTCT  200

seq1  CTCAAGGGATGATGCCTGGGATCTTCAACCAGTCAATGTTATCTAAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGGATGATGCCTGGGATCTTCAACCAGTCAATGTTATCTAAGAAG  250

seq1  GTGATTTCAGAATCCTGTGACCCCATGGTTCTACAGGTTGGATCCAGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTCAGAATCCTGTGACCCCATGGTTCTACAGGTTGGATCCAGTGT  300

seq1  GGATGCTGAAATACAAAGCTTCCAGATAATGTATGAGGATGAAGATGCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGAAATACAAAGCTTCCAGATAATGTATGAGGATGAAGATGCAA  350

seq1  GTGAGGAGCAGCAGCAGAGAGGCCTGGAAAGTGGCTCCATGCTGGAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGAGCAGCAGCAGAGAGGCCTGGAAAGTGGCTCCATGCTGGAGCCA  400

seq1  GAACTAGTGAAGACAGAAAACCGGATACTCAGACAAAAGACATCACTAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGTGAAGACAGAAAACCGGATACTCAGACAAAAGACATCACTAGC  450

seq1  AACTGACTCAATGATGGGTGACGGATACAGCTTCCTTCCTATGCTCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGACTCAATGATGGGTGACGGATACAGCTTCCTTCCTATGCTCTGTG  500

seq1  AGCCTCTGAGCATCCAAGATCCAGGTCTTGCAGAGATGGGTCTTCAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTCTGAGCATCCAAGATCCAGGTCTTGCAGAGATGGGTCTTCAAGAG  550

seq1  GTTCCAGAGAATCCAGAATTTAAGAACTATGAGAAAATTAACATATATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAGAGAATCCAGAATTTAAGAACTATGAGAAAATTAACATATATGG  600

seq1  AAAGTCAGATGGCCGCACTAACACTGAGTTGTCAAAACTCTACCAGAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCAGATGGCCGCACTAACACTGAGTTGTCAAAACTCTACCAGAATC  650

seq1  ATGGAAGTCGAATCAAGGGTTTGTTCCTACCGGCATCCCTTGCAAGTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAGTCGAATCAAGGGTTTGTTCCTACCGGCATCCCTTGCAAGTGTT  700

seq1  AGTTCTCAGGAAGACCCAGAGAAGGACCTGAGTAGGTCTCCAGAATTGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCAGGAAGACCCAGAGAAGGACCTGAGTAGGTCTCCAGAATTGCA  750

seq1  GGAAGATGACCCACATTCCTTTGCATTTGGTTCTGATGATTCCAAAGATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGATGACCCACATTCCTTTGCATTTGGTTCTGATGATTCCAAAGATG  800

seq1  GGGAGATGGGAGATGATCTTCAGAATTACAGGCTCGTCAGTGTGGTCAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGATGGGAGATGATCTTCAGAATTACAGGCTCGTCAGTGTGGTCAGC  850

seq1  CACTTTGGGAGCTCCCCAAATTCAGGCCATTACGTAAGTGATGTGTATGA  900
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CACTTTGGGAGCTCCCCAAATTCA-GCCATTACGTAAGTGATGTGTATGA  899

seq1  CTTTCAAAAGCAAGCCTGGCTCCTTTACAGTGATGTCCAAGTGTTCGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAAAAGCAAGCCTGGCTCCTTTACAGTGATGTCCAAGTGTTCGAGA  949

seq1  GTTCAGATCCCTCCATTCAGGAGAACAGGCTAAACAGCGGATACATCTTC  1000
      ||||||||||||||||||| ||| ||| ||||||||||||||||||||||
seq2  GTTCAGATCCCTCCATTCA-GAG-ACA-GCTAAACAGCGGATACATCTTC  996

seq1  TTTTACATGCATAATGAGATTTTTGAGGAACTGTTGAAAAAGGCATCT-G  1049
      |||||||||||| ||||||||||||||  |||||||||||   ||||| |
seq2  TTTTACATGCAT-ATGAGATTTTTGAG--ACTGTTGAAAA--TCATCTGG  1041

seq1  AGTGCAAGGTCCTTAG-CACATCTAAGGAGGAAAAGAGGGACATAGATTA  1098
      ||||||  |||||||| ||||||||  || ||||||||||| ||||||||
seq2  AGTGCA--GTCCTTAGCCACATCTA--GA-GAAAAGAGGGAAATAGATTA  1086

seq1  CTTCTCAACATTGCTTAACGGCCTTACATACATCCTGGAAGAATTCTAAA  1148
      |||||| ||| ||| |||||  || |||||||| |||  || ||||  ||
seq2  CTTCTC-ACA-TGCCTAACG--CTAACATACAT-CTG--AG-ATTC--AA  1126

seq1  TCCTGCCTAAAATGAAG-AAGAGTCACATAG--CTCA-AGATGAAAACT  1193
      | |||| |  |||| || |||| ||||||||   ||| |||||||||||
seq2  T-CTGCTT--AATGGAGAAAGATTCACATAGTCTTCAGAGATGAAAACT  1172