BAC Information

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BAC

Clone NameB6Ng01-258N19
Chromosome7 (Build37)
Map Location 79,939,296 - 79,940,381
singlet/doubletsinglet
Overlap genenone
Upstream geneMctp2, LOC100042873, LOC100042880, LOC233391, LOC665570
Downstream geneLOC100042029, EG384643, LOC625243, 4930429H19Rik, LOC665588, Rgma, Chd2, 1810026B05Rik, EG665610, LOC244061, A830073O21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258N19.bB6Ng01-258N19.g
ACCGA064192GA064193
length1,1021,034
definitionB6Ng01-258N19.b B6Ng01-258N19.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggtttagttctataccccattttttgattgggttgttgagtt
tttttggtgattaagttcttgagttctttatatattttggatattagccc
tctatcagatgtggggttagtgaagatttttcccaatctgtaggttgccg
atttgtcttattgatgatgtcctttgccttacagaagctttccagtttca
tttatcaattgttgatcttagagcaaaagccattggaattcattttagga
aatttccttgtgtcaatgagttcaaagctctttcccactttttcttcaat
tagagtcggtgtatctcattttatgttgaggtccttgatccacttggact
tgagctttgtacaaggtgacaaaatatgggtctattttcattcttctaca
tacagacagccaattagaccagcactatttattgaagatgatttcttttt
tccattgcatatttttggtgtctttatcaaagatcaagtgtctgtaagtg
tgtggtttcttttgagtttgggtgtagtcatgaggcttgctttggctggg
tgaactgagaacatctgtgatttgaaggcatttccaggtttaaattctaa
caagtaagggtggttcctgagttctgtatgagagagcaattggtacgtag
atcagactctctggtagaaatctaacaattgtgacactgcctgctggcaa
gggctgtgtctgaagctcaaagtacagtgagtggcaggatggagaattgt
caagctggttgcccttagaaggccgagttcaaaccaaataacaatgactt
tgtggttagaggagaagtgctaggaacagggctatgtgatgggagctatc
actgtatttgacaagttgtaagaaaaagattaaccaaaataaatggacag
tttacccagcaggaaagaaaaagacatctcagagtcatgtaggaaaaaaa
agaattcaaaaaagacttcaagttacacagtaagagacagagctaagcgt
gacaatggcgaatgaaactcagttaatactaaggacaatcagtggaatgg
gggtgctcacagtaaaaatctaatcaggaggggcttaactcatacatcta
ga

gaattcctgatctttccaagacttttatcacaaatgggtgttgtattttg
tcaaatgcttccttcgagtctaaggagatgatcatgtgggttttgtcttt
gagtttgtttatatgttggattacattgatggatttctgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgtt
ttgatgtgttcttggattggattattgagaattctatcgagtatttttgc
attgatgttcataagggaaattggtctgaagttctctatctttgttggat
ctttctgaggtttaggcatcagagtaattgtggcttcatagaatgaatta
ggtagaataccttctgcttctattttgaggaatagtttttgaagaactgg
aagtagatcttctttgaaggtctgatagaactcttcactaaacccatctg
gtcctgggctttttatggttgggaaactattaatgactacttctatttct
ttaggggatataggactattgagatcattaacatgatcctgatttaactt
tggaaccaggtatctgtctagaaatttgtccatttcatccaggttttcca
gttttgttgagtatagccttttgtagaagggtctgatgatgttttcggtt
tcttcaggatctgttgttctgtctcccttttcatttctgatttttgttaa
ttaggatgctgtccctgtgccctctagtgagtctggctaagggtttatct
atctttgttgattttctcaaagaaccagcttctccattgggttgattctt
gaatagttcttcttgcttccacttgggttgatttcacccctcagtttgat
atttcctgccttgtactcctcttgggtgaatttgcttccttttcttctag
agctttaggcatgttgtcaatctgctagtgtgtgcttctatctctaggtt
tccttttagaagcactcagaagctataagtttccttcttagaaatgcttt
cattgtgccccataagttggggtttcaatgttgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_79939296_79940381
seq2: B6Ng01-258N19.b_70_1151 (reverse)

seq1  TCTAGATGTATGAGGTTAAGCCACCTCTTAATTAGATTTTTACTGTGAGG  50
      ||||||||||||| |||||||| |||| | |||||||||||||||||| |
seq2  TCTAGATGTATGA-GTTAAGCC-CCTCCTGATTAGATTTTTACTGTGA-G  47

seq1  CACCCCAAT--CACTGATTTGTCCCTTAGTTATAACTGAGTTTTCATTCG  98
      |||||| ||  |||||| |||| |||||||  |||||||| |||||||||
seq2  CACCCCCATTCCACTGA-TTGT-CCTTAGTATTAACTGAG-TTTCATTCG  94

seq1  CCATTTGTCACGCTTAGCTCTGTCTCTTACTGTGTTAACTTGAAGTCTTT  148
      ||| |||||||||||||||||||||||||||||| |||||||||||||||
seq2  CCA-TTGTCACGCTTAGCTCTGTCTCTTACTGTG-TAACTTGAAGTCTTT  142

seq1  TTTTGATTC-TTTTTATCCTACATGACTCTGAGATGTCTTTTTCTTTCCT  197
      |||  |||| ||||| ||||||||||||||||||||||||||||||||||
seq2  TTTGAATTCTTTTTTTTCCTACATGACTCTGAGATGTCTTTTTCTTTCCT  192

seq1  GCT-GGTAAACTGTCCATTTATTTTGGTTAATCTTTTTCTTACAACTTGT  246
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGTAAACTGTCCATTTATTTTGGTTAATCTTTTTCTTACAACTTGT  242

seq1  CAAATACAGTGATAGCTCCCATCACATAGCCCTGTTCCTAGCACTTCTCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACAGTGATAGCTCCCATCACATAGCCCTGTTCCTAGCACTTCTCC  292

seq1  TCTAACCACAAAGTCATTGTTATTTGGTTTGAACTCGGCCTTCTAAGGGC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAACCACAAAGTCATTGTTATTTGGTTTGAACTCGGCCTTCTAAGGGC  342

seq1  AACCAGCTTGACAATTCTCCATCCTGCCACTCACTGTACTTTGAGCTTCA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGCTTGACAATTCTCCATCCTGCCACTCACTGTACTTTGAGCTTCA  392

seq1  GACACAGCCCTTGCCAGCAGGCAGTGTCACAATTGTTAGATTTCTACCAG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAGCCCTTGCCAGCAGGCAGTGTCACAATTGTTAGATTTCTACCAG  442

seq1  AGAGTCTGATCTACGTACCAATTGCTCTCTCATACAGAACTCAGGAACCA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCTGATCTACGTACCAATTGCTCTCTCATACAGAACTCAGGAACCA  492

seq1  CCCTTACTTGTTAGAATTTAAACCTGGAAATGCCTTCAAATCACAGATGT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTACTTGTTAGAATTTAAACCTGGAAATGCCTTCAAATCACAGATGT  542

seq1  TCTCAGTTCACCCAGCCAAAGCAAGCCTCATGACTACACCCAAACTCAAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTTCACCCAGCCAAAGCAAGCCTCATGACTACACCCAAACTCAAA  592

seq1  AGAAACCACACACTTACAGACACTTGATCTTTGATAAAGACACCAAAAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCACACACTTACAGACACTTGATCTTTGATAAAGACACCAAAAAT  642

seq1  ATGCAATGGAAAAAAGAAATCATCTTCAATAAATAGTGCTGGTCTAATTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAATGGAAAAAAGAAATCATCTTCAATAAATAGTGCTGGTCTAATTG  692

seq1  GCTGTCTGTATGTAGAAGAATGAAAATAGACCCATATTTTGTCACCTTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCTGTATGTAGAAGAATGAAAATAGACCCATATTTTGTCACCTTGT  742

seq1  ACAAAGCTCAAGTCCAAGTGGATCAAGGACCTCAACATAAAATGAGATAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAGCTCAAGTCCAAGTGGATCAAGGACCTCAACATAAAATGAGATAC  792

seq1  ACCGACTCTAATTGAAGAAAAAGTGGGAAAGAGCTTTGAACTCATTGACA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGACTCTAATTGAAGAAAAAGTGGGAAAGAGCTTTGAACTCATTGACA  842

seq1  CAAGGAAATTTCCTAAAATGAATTCCAATGGCTTTTGCTCTAAGATCAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAATTTCCTAAAATGAATTCCAATGGCTTTTGCTCTAAGATCAAC  892

seq1  AATTGATAAATGAAACTGGAAAGCTTCTGTAAGGCAAAGGACATCATCAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGATAAATGAAACTGGAAAGCTTCTGTAAGGCAAAGGACATCATCAA  942

seq1  TAAGACAAATCGGCAACCTACAGATTGGGAAAAATCTTCACTAACCCCAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAAATCGGCAACCTACAGATTGGGAAAAATCTTCACTAACCCCAC  992

seq1  ATCTGATAGAGGGCTAATATCCAAAATATATAAAGAACTCAAGAACTTAA  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGATAGAGGGCTAATATCCAAAATATATAAAGAACTCAAGAACTTAA  1042

seq1  TCACCAAAAAAACTCAACAACCCAATCAAAAAATGGGGTA  1086
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCACCAAAAAAACTCAACAACCCAATCAAAAAATGGGGTA  1082


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