BAC Information

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BAC

Clone NameB6Ng01-258O03
Chromosome7 (Build37)
Map Location 127,834,792 - 127,972,149
singlet/doubletdoublet
Overlap geneBC030336, E030013G06Rik, EG436008
Upstream geneBC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2, Anks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik
Downstream geneLOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6, Otoa, LOC668556, Hs3st2, Usp31, Scnn1g
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258O03.bB6Ng01-258O03.g
ACCGA064206GA064207
length8051,095
definitionB6Ng01-258O03.b B6Ng01-258O03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,971,349 - 127,972,149)(127,834,792 - 127,835,580)
sequence
gaattccagaatatccagagctacctagtgtgagacttgtctcgaaaaac
aagacaacactcccaaactatgcgccataactatgagaagggttttgata
ttctgtacaaagaaggcatcaaatacatacttattgttaaataaacatgt
actaagcatgtgaaaaacatgagtgatgagtctagggccactgggaattt
gtgtgagtgtgtgtgtgtgtgtacatacatatgtatgtatatatatgtac
atgtatatgtatattcagagtttgggttcaaaagagtgtcgtctttggga
tctcaggtctggctagaagataagctgcctatagctggaatgacagctgt
gaataggaatttggagcggtccaattttcagtacgtaacaccgtctgagc
aaaaacttagttggtcgggagcattagaaaggagcgggctgtagtttcgg
gtctacatggaaggttctgagactgcagagaagaatcttgtgacagaggt
gttcagcaatggtggagaggaggagaacggtgtagggctgggattccccc
acccctcagcacccctcttacctcactgcgggtgagtagtggggggatgg
tgcagatgggtctcagtgccaggtgcaggtactccatcactgcagctgtg
ggagggggcaggtgagaggggctcaggatgcatccactgggggcgtgtct
ttgccttgctacggttcccttttaaaaaggtcaccggaattcccttcagt
tggcagcatttgctggggggcctgttatctaggagatatgtcagggtaag
atggg
gaattctttagtatgcatatagttttactgcataacactgtataacaaag
acaaagcaaatttatatattgatgagaaggataggcttctttaatttaca
taaaggttcagtctcagctgaatatttgctactgcaaggcatagagcatc
atcaacatttttcagctgatcaatattttgatttgatgattgtcagtgct
gagaatgctacttcacataaatacatagtacaaaatagcagaaatcgatt
taaggccatgtcaggaatggcgggcagttctgtcctaatcccaagccaaa
atcatttaatgaattttctttaatgaaactgaagtcagcacctcaaaata
gtttttaaaaatcaaacattcttgcacagtataatcaaaagataacttaa
tttgataaatgctaaagaatgctaacaggaaaacactacaataaaaactg
tagttcacaacctagaggagtctcaggcctgagctggggtgtctcaggca
gtgttcttttgctttacatggaaagcctgcattcagttcactgcaaaatg
caagtgtgtgtagagccaagggtgcagtgagttcacacagcacacgggcc
agcaggggtagaaacgtctcagctttgttatggcgattttgcattggttt
ctgtttacttcattttcagaaaccttttactgctggtcattggtgccata
gatttaactccagctcttaagaggcagaggcaggtggatcttagtcaggt
ctacagagggagttccaggacagcagacttccagagaaaccctgtcttgg
aaaaaactaaaaaaaaaaagaaggggtgggggactgtagagatggctcag
aagttaagagtacttactgactgctcttccagaggtcctgagttcaattc
ccagcaaccacatggtggctcacaaccatctgtaatgggatctgatgccc
tcttctggtgtgtctgaagacactacatgcactcatataaatgaaaagaa
agaatgtctgagttgggctttcattgtactgcagagctgtgtagaggact
gctacttacagagtttggtatttttttgaatctttttgtccttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_127971349_127972149
seq2: B6Ng01-258O03.b_43_846 (reverse)

seq1  CCATCTTACCATGACATATCTCCTAGCTAACAGG-CCCCCAGCAAATGCT  49
      |||||||||| ||||||||||||||| ||||||| |||||||||||||||
seq2  CCATCTTACCCTGACATATCTCCTAGATAACAGGCCCCCCAGCAAATGCT  50

seq1  GCCAACTGAAGGGAA-TCCAGTGACCTTTTT-AAAGGGACCCCTAGCAAG  97
      ||||||||||||||| ||| ||||||||||| ||||||| || |||||||
seq2  GCCAACTGAAGGGAATTCCGGTGACCTTTTTAAAAGGGAACCGTAGCAAG  100

seq1  GC-AAGACACGCCCCCAGTGGATGCATCCCTGAGCCCCTCTCACCTGCCC  146
      || |||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GCAAAGACACGCCCCCAGTGGATGCAT-CCTGAGCCCCTCTCACCTGCCC  149

seq1  CCTCCCACAGCTGCAGTGATGGAGTACCTGCACCTGGCACTGAGACCCAT  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCACAGCTGCAGTGATGGAGTACCTGCACCTGGCACTGAGACCCAT  199

seq1  CTGCACCATCCCCCCACTACTCACCCGCAGTGAGGTAAGAGGGGTGCTGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCACCATCCCCCCACTACTCACCCGCAGTGAGGTAAGAGGGGTGCTGA  249

seq1  GGGGTGGGGGAATCCCAGCCCTACACCGTTCTCCTCCTCTCCACCATTGC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTGGGGGAATCCCAGCCCTACACCGTTCTCCTCCTCTCCACCATTGC  299

seq1  TGAACACCTCTGTCACAAGATTCTTCTCTGCAGTCTCAGAACCTTCCATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACACCTCTGTCACAAGATTCTTCTCTGCAGTCTCAGAACCTTCCATG  349

seq1  TAGACCCGAAACTACAGCCCGCTCCTTTCTAATGCTCCCGACCAACTAAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACCCGAAACTACAGCCCGCTCCTTTCTAATGCTCCCGACCAACTAAG  399

seq1  TTTTTGCTCAGACGGTGTTACGTACTGAAAATTGGACCGCTCCAAATTCC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCTCAGACGGTGTTACGTACTGAAAATTGGACCGCTCCAAATTCC  449

seq1  TATTCACAGCTGTCATTCCAGCTATAGGCAGCTTATCTTCTAGCCAGACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCACAGCTGTCATTCCAGCTATAGGCAGCTTATCTTCTAGCCAGACC  499

seq1  TGAGATCCCAAAGACGACACTCTTTTGAACCCAAACTCTGAATATACATA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATCCCAAAGACGACACTCTTTTGAACCCAAACTCTGAATATACATA  549

seq1  TACATGTACATATATATACATACATATGTATGTACACACACACACACACT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTACATATATATACATACATATGTATGTACACACACACACACACT  599

seq1  CACACAAATTCCCAGTGGCCCTAGACTCATCACTCATGTTTTTCACATGC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAAATTCCCAGTGGCCCTAGACTCATCACTCATGTTTTTCACATGC  649

seq1  TTAGTACATGTTTATTTAACAATAAGTATGTATTTGATGCCTTCTTTGTA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTACATGTTTATTTAACAATAAGTATGTATTTGATGCCTTCTTTGTA  699

seq1  CAGAATATCAAAACCCTTCTCATAGTTATGGCGCATAGTTTGGGAGTGTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATATCAAAACCCTTCTCATAGTTATGGCGCATAGTTTGGGAGTGTT  749

seq1  GTCTTGTTTTTCGAGACAAGTCTCACACTAGGTAGCTCTGGATATTCTGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGTTTTTCGAGACAAGTCTCACACTAGGTAGCTCTGGATATTCTGG  799

seq1  AATTC  801
      |||||
seq2  AATTC  804

seq1: chr7_127834792_127835580
seq2: B6Ng01-258O03.g_378_1159

seq1  TTTTCTTTAATGAAACTGAAGTCAGCACCTCAAAATAGTTTTTAAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTAATGAAACTGAAGTCAGCACCTCAAAATAGTTTTTAAAAATC  50

seq1  AAACATTCTTGCACAGTATAATCAAAAGATAACTTAATTTGATAAATGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTCTTGCACAGTATAATCAAAAGATAACTTAATTTGATAAATGCT  100

seq1  AAAGAATGCTAACAGGAAAACACTACAATAAAAACTGTAGTTCACAACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGCTAACAGGAAAACACTACAATAAAAACTGTAGTTCACAACCT  150

seq1  AGAGGAGTCTCAGGCCTGAGCTGGGGTGTCTCAGGCAGTGTTCTTTTGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGTCTCAGGCCTGAGCTGGGGTGTCTCAGGCAGTGTTCTTTTGCT  200

seq1  TTACATGGAAAGCCTGCATTCAGTTCACTGCAAAATGCAAGTGTGTGTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGGAAAGCCTGCATTCAGTTCACTGCAAAATGCAAGTGTGTGTAG  250

seq1  AGCCAAGGGTGCAGTGAGTTCACACAGCACACGGGCCAGCAGGGGTAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAAGGGTGCAGTGAGTTCACACAGCACACGGGCCAGCAGGGGTAGAA  300

seq1  ACGTCTCAGCTTTGTTATGGCGATTTTGCATTGGTTTCTGTTTACTTCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCTCAGCTTTGTTATGGCGATTTTGCATTGGTTTCTGTTTACTTCAT  350

seq1  TTTCAGAAACCTTTTACTGCTGGTCATTGGTGCCATAGATTTAACTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAACCTTTTACTGCTGGTCATTGGTGCCATAGATTTAACTCCAG  400

seq1  CTCTTAAGAGGCAGAGGCAGGTGGATCTTAGTCAGGTCTACAGAGGGAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTAAGAGGCAGAGGCAGGTGGATCTTAGTCAGGTCTACAGAGGGAGT  450

seq1  TCCAGGACAGCAGACTTCCAGAGAAACCCTGTCTTGGAAAAAACT-AAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCAGGACAGCAGACTTCCAGAGAAACCCTGTCTTGGAAAAAACTAAAAA  500

seq1  AAAAAAGAAGGGGTGGGGGACTGTAGAGATGGCTCAGAAGTTAAGAGTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGAAGGGGTGGGGGACTGTAGAGATGGCTCAGAAGTTAAGAGTAC  550

seq1  TTACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAT  600

seq1  GGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTGTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCTCACAACCATCTGTAATGGGATCTGATGCCCTCTTCTGGTGTGT  650

seq1  CTGAAGACACCTACAATGCACTCATATAAATGAAAAGAAAGAAATGTCTG  699
      ||||||||| |||| |||||||||||||||||||||||||| ||||||||
seq2  CTGAAGACA-CTAC-ATGCACTCATATAAATGAAAAGAAAG-AATGTCTG  697

seq1  AGTTTGGGCTTTCATTGTACTGCAGAGCTGTTGTAGGAGGACTGCTACCT  749
      || ||||||||||||||||||||||||||| |||| |||||||||||| |
seq2  AG-TTGGGCTTTCATTGTACTGCAGAGCTG-TGTA-GAGGACTGCTACTT  744

seq1  ACAGAGGTTGGTATTTTTTTGAAATTCTTTTTGTCCTTAG  789
      |||||| ||||||||||||||||  |||||||||||||||
seq2  ACAGAGTTTGGTATTTTTTTGAA--TCTTTTTGTCCTTAG  782