BAC Information

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BAC

Clone NameB6Ng01-259M06
Chromosome7 (Build37)
Map Location 93,932,014 - 93,933,126
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1
Downstream geneEG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr, Grm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-259M06.bB6Ng01-259M06.g
ACCGA064863GA064864
length1,2381,105
definitionB6Ng01-259M06.b B6Ng01-259M06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctataaaatatcttcgtttgattcttaccaggtaagtgaaacatc
tttatgacaagaacttcaaatacttggaaaaaagtaactgaagtcctcaa
aagatgtaaagatctcctatgctcatgcattggtagaattaacataataa
gaatggccgccttatgaaaacaatgtacagattcaatgcaacacccgttg
aaattacaacaagattcttcacagacattgaaagagcaatttttcaactt
catgtggaaaaaaacaaacaagcaaacaaccaaggacaaccaaaacaatt
tttaacaataaaagaacatccaggggaaattgccatccttgacctaaggc
tgtactacagagcaatagtgatttaaaaatccatgatattagtacagata
ctgacaggttgatcagtggaataaataaaagtaaacccatacatctatag
acacttggtctttgacaaagaagctaaaaagtacagtggcatgaagaagg
catcttcagtatatggtgctggtctaactggtgttctgtatataggagaa
tgaaaataggcatatcttaatcaccttgtacaaagctccattgaaagtag
ataaaggatcttaacctaaaaccagatacactggatctaataagagagaa
agttgtaaagagccttgaattcattggcatagggaaaatattcctgaaca
gatcaacaatggctcaggctctatgatcaagaactgacaaatgggacctc
atgaaacttacatgaatgcttctgtaatttaaatgacacgatcaattgga
aaaatcagaaacatactgattggaaaaaaaatcttcactaactcgccatt
tgatgggagggctaatatcaaaaaaatatataaagaactcgagatggtaa
cctccaaagtacccaataacccaattataaaaaggggtacagagcttaac
aaagatttcataacagaggaatcttgaatggcctaagaagcaattaaaga
ctatttcaaagtacttagttatcaaggaaatggaaatcaaaacgacctga
agattcttactcaactaatcatggtgctaagaactattcctcaactattg
tcacacttgctgccaagaatgttgagaaagaggacatctttcatggctga
atggatgaaaacctgtacaccactgtgcattcacttggtattacctctgg
aaagtgggaaataagtgctctacccgtggaagagcatg
gaattcttttagacacagtcccaagattaaattcagaggtgactaccatt
tgcctatttatgagtatgaaatttggaataaatagtaagaaaaatcaaat
cactgtaaaaaaatttaaccacttcattgaatttgtagaagcattcctca
gaaaatcacctaaaaaccgcatggtactacccttacatttcagaagacaa
tgaacaacattactcacaaatagttataaagacagaacatgccatctaat
atatattgcccaagaaaacatattatgtttaaatatcaatatttttcata
atgactataaaaatgcttccttatcttacaaacatggatactgagttaga
ggataatgcaatactttacagaatatagagaccaattatggtttctgaag
gctcttatagaaaaaacatatttaagttgtttcagtgtttagattgctga
acctaattatctatgacattcagcataccttgtaagaaattatgctcaaa
ggcaggcccaacgttttagcattcattttacctgacaaaatggaatgatg
atatgatctgataaagttctgtgttctacagagtggtcaagtacatgaat
tctcagctacaatctcatcagaatgggaacctacatgacactttcactat
caataacaattgctctcaaaacaaattctgccattaacctaaaagtacag
gctcagaggttcagtccattatcatcggggaatgaccatgtcagcatcca
ggtaggcatggtactggaggaactgagagatttacatcttcatctgaagc
agctgcaaaactggcttccaggcagctaggatgacagtcttaaagcccat
ccccacagtgacacaattcctccaacatggccacaacctactgcaatgag
gccacacctccaagcatacttgctgttttaacaatatcaggattgtattc
aaattctaaattagaaactcatgaagcatctgggtattctagcagatatt
tgttagttgtttgagaagagatgcccatgcagccatttctatttcacatt
tatgtcctgaataaatgatgtgcctaatagtacttgctaacattgaaaga
ggagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93932014_93933126
seq2: B6Ng01-259M06.g_69_1173

seq1  GAATTCTTTTAGACACAGTCCCAAGATTAAATTCAGAGGTGACTACCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAGACACAGTCCCAAGATTAAATTCAGAGGTGACTACCATT  50

seq1  TGCCTATTTATGAGTATGAAATTTGGAATAAATAGTAAGAAAAATCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTATTTATGAGTATGAAATTTGGAATAAATAGTAAGAAAAATCAAAT  100

seq1  CACTGTAAAAAAATTTAACCACTTCATTGAATTTGTAGAAGCATTCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTAAAAAAATTTAACCACTTCATTGAATTTGTAGAAGCATTCCTCA  150

seq1  GAAAATCACCTAAAAACCGCATGGTACTACCCTTACATTTCAGAAGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATCACCTAAAAACCGCATGGTACTACCCTTACATTTCAGAAGACAA  200

seq1  TGAACAACATTACTCACAAATAGTTATAAAGACAGAACATGCCATCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAACATTACTCACAAATAGTTATAAAGACAGAACATGCCATCTAAT  250

seq1  ATATATTGCCCAAGAAAACATATTATGTTTAAATATCAATATTTTTCATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGCCCAAGAAAACATATTATGTTTAAATATCAATATTTTTCATA  300

seq1  ATGACTATAAAAATGCTTCCTTATCTTACAAACATGGATACTGAGTTAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATAAAAATGCTTCCTTATCTTACAAACATGGATACTGAGTTAGA  350

seq1  GGATAATGCAATACTTTACAGAATATAGAGACCAATTATGGTTTCTGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATGCAATACTTTACAGAATATAGAGACCAATTATGGTTTCTGAAG  400

seq1  GCTCTTATAGAAAAAACATATTTAAGTTGTTTCAGTGTTTAGATTGCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTATAGAAAAAACATATTTAAGTTGTTTCAGTGTTTAGATTGCTGA  450

seq1  ACCTAATTATCTATGACATTCAGCATACCTTGTAAGAAATTATGCTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTAATTATCTATGACATTCAGCATACCTTGTAAGAAATTATGCTCAAA  500

seq1  GGCAGGCCCAACGTTTTAGCATTCATTTTACCTGACAAAATGGAATGATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCCCAACGTTTTAGCATTCATTTTACCTGACAAAATGGAATGATG  550

seq1  ATATGATCTGATAAAGTTCTGTGTTCTACAGAGTGGTCAAGTACATGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGATCTGATAAAGTTCTGTGTTCTACAGAGTGGTCAAGTACATGAAT  600

seq1  TCTCAGCTACAATCTCATCAGAATGGGAACCTACATGACACTTTCACTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGCTACAATCTCATCAGAATGGGAACCTACATGACACTTTCACTAT  650

seq1  CAATAACAATTGCTCTCAAAACAAATTCTGCCATTAACCTAAAAGTACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACAATTGCTCTCAAAACAAATTCTGCCATTAACCTAAAAGTACAG  700

seq1  GCTCAGAGGTTCAGTCCATTATCATCGGGGAATGACCATGTCAGCATCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGGTTCAGTCCATTATCATCGGGGAATGACCATGTCAGCATCCA  750

seq1  GGTAGGCATGGTACTGGAGGAACTGAGAGATTTACATCTTCATCTGAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGGCATGGTACTGGAGGAACTGAGAGATTTACATCTTCATCTGAAGC  800

seq1  AGCTGCAAAACTGGCTTCCAGGCAGCTAGGATGACAGTCTTAAAGCCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCAAAACTGGCTTCCAGGCAGCTAGGATGACAGTCTTAAAGCCCAT  850

seq1  CCCCACAGTGACACAATTCCTCCAACATGGCCACAACCTACTGCAATGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAGTGACACAATTCCTCCAACATGGCCACAACCTACTGCAATGAG  900

seq1  GCCACACCTCCAAGCATACTTGCTGTTTTAACAATATCAGGATTGTATTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACACCTCCAAGCATACTTGCTGTTTTAACAATATCAGGATTGTATTC  950

seq1  AAAATTCTAAATTAGAAACTCATGAAGCATCTGGGTATTCTAGCAGATAA  1000
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -AAATTCTAAATTAGAAACTCATGAAGCATCTGGGTATTCTAGCAGAT-A  998

seq1  TTTGTTAGTTGTTTGAAGAGAGGATGCCCATGCAAGCCATTTTCTATTTC  1050
      ||||||||||||||||  ||| ||||||||||| ||||| ||||||||||
seq2  TTTGTTAGTTGTTTGAGAAGA-GATGCCCATGC-AGCCA-TTTCTATTTC  1045

seq1  ACATTTTATGTCCTGGAATAAATGATGTTGCCT-ATAGTACTTGCTAACA  1099
      ||| |||||||||| |||||||||||| ||||| ||||||||||||||| 
seq2  ACA-TTTATGTCCT-GAATAAATGATG-TGCCTAATAGTACTTGCTAAC-  1091

seq1  ATTGAAAGAGGAGT  1113
      ||||||||||||||
seq2  ATTGAAAGAGGAGT  1105