BAC Information

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BAC

Clone NameB6Ng01-260I22
Chromosome7 (Build37)
Map Location 25,646,597 - 25,647,036
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC546943, V1rd12, V1rd13, V1rd17, LOC100043121, V1rd16, LOC384575, V1rd20, V1rd18, V1rd15, EG622446, Zfp180, Zfp112, Zfp235, Zfp114, Zfp111, Zfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936
Downstream geneLOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, Gsk3a, 9130221H12Rik, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe, BC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260I22.bB6Ng01-260I22.g
ACCGA065448GA065449
length925434
definitionB6Ng01-260I22.b B6Ng01-260I22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaggccagcctaggctctgagtgagaccctgttacacacacaca
cacacacacacacacacacacacacacacacacacgtatgagaagggaga
aggaagcggagggggagggaggaagaggtcagtaccatgatgaactgaag
cttacacacaggggccgcctagcacgtgcaggagttgagtttcatccata
gcaccaaaagaaaaagtaaaataaatctcatgataagcgaggctacattg
gaggaaagtgattatcgcatgaggacatcataaggccagaggtctttggt
acagtgaccactgtaccaaaacctttgtttccttttgttttgactgggtc
tctgtttgtatcccaggctggcctacaattcactatgtagcccagactgg
tcttgaacttacagcagccctcgtgcttcatccttctgagtgctgcaatt
accggtgtgagccacaacaactggctggatttgttttaacagctacaata
aaacataactagtgtacatattaaccgtgtgctgctgtacatggataatc
tcagcatttgggagacttagacaaaaaagacttagttccagaccagccgg
gactactcagcaagaccccacctcaaaaaagatgaggtctccacagatgg
ctcagcagttttagagtgaacagttaagaggactcaagtttggtttccta
gcatccacaccagacagctcactactgtctttaacgctagctcccagggc
tttcacagtgccctcttctggcctccacaggcactacactcacttgtaga
gcaacaaacccccatacaaattcatattacacattaatttttaaaaagcc
agccgggtgtgatggcacacgccttttaatcccagcacttgggaggcaaa
ggcaagtggaattctgatttcgaag
cagccttgttgtgcaatgtgtcacctaagcatgtcttatgttacctactg
ctcctccccatttgtctctgtgtgtctccatggtcccatgtgccctgtgt
ccctgtgaacaatattctctgtatcccatgtcttcatgtccctgatggct
ctctgaagtggctgccttgctccattcttcttatctatgcctgcctgcct
gccagcattatttatttacactgtttgccagtaatggtcttaagctcaca
atgttcgcagggtgatggcacccctgccacgagccctctattgcctcccg
cactgctttatcccttgtgtggctcacagctgccaaggcttttgctatca
ataaatggtttggcctaaggtttaaaaaacataaagaaggaaaaaaggaa
ggaagggaaggaggaagggaggagaggaaaagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_25646597_25647036
seq2: B6Ng01-260I22.g_65_504

seq1  GAATTCCAGCCTTGTTGTGCAATGTGTCACCTAAGCATGTCTTATGTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGCCTTGTTGTGCAATGTGTCACCTAAGCATGTCTTATGTTAC  50

seq1  CTACTGCTCCTCCCCATTTGTCTCTGTGTGTCTCCATGGTCCCATGTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCTCCTCCCCATTTGTCTCTGTGTGTCTCCATGGTCCCATGTGCC  100

seq1  CTGTGTCCCTGTGAACAATATTCTCTGTATCCCATGTCTTCATGTCCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCCCTGTGAACAATATTCTCTGTATCCCATGTCTTCATGTCCCTG  150

seq1  ATGGCTCTCTGAAGTGGCTGCCTTGCTCCATTCTTCTTATCTATGCCTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTCTGAAGTGGCTGCCTTGCTCCATTCTTCTTATCTATGCCTGC  200

seq1  CTGCCTGCCAGCATTATTTATTTACACTGTTTGCCAGTAATGGTCTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCCAGCATTATTTATTTACACTGTTTGCCAGTAATGGTCTTAAG  250

seq1  CTCACAATGTTCGCAGGGTGATGGCACCCCTGCCACGAGCCCTCTATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAATGTTCGCAGGGTGATGGCACCCCTGCCACGAGCCCTCTATTGC  300

seq1  CTCCCGCACTGCTTTATCCCTTGTGTGGCTCACAGCTGCCAAGGCTTTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGCACTGCTTTATCCCTTGTGTGGCTCACAGCTGCCAAGGCTTTTG  350

seq1  CTATCAATAAATGGTTTGGCCTAAGGTTTAAAAAACATAAAGAAGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAATAAATGGTTTGGCCTAAGGTTTAAAAAACATAAAGAAGGAAAA  400

seq1  AAGGAAGGAAGGGAAGGAGGAAGGGAGGAGAGGAAAAGAA  440
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGGAAGGGAAGGAGGAAGGGAGGAGAGGAAAAGAA  440