BAC Information

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BAC

Clone NameB6Ng01-260M10
Chromosome7 (Build37)
Map Location 121,556,182 - 121,676,893
singlet/doubletdoublet
Overlap gene4933406I18Rik, Pde3b
Upstream geneLOC100042736, Mlstd2, EG434228, Spon1, Rras2, LOC668451, Copb1, Psma1
Downstream geneCyp2r1, Calca, LOC100043295, Calcb, Insc, EG627967, LOC668472, Sox6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260M10.bB6Ng01-260M10.g
ACCGA065615GA065616
length463289
definitionB6Ng01-260M10.b B6Ng01-260M10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(121,676,425 - 121,676,893)(121,556,182 - 121,556,458)
sequence
cataaaatcccgtaaaagctatttcatttggtccttccccacgtcctacc
agaagccatcaactgagaaaagctgaacttcagtatcttcacaacagtgt
ttaaggactctcttcagtagcttcctatctggactgtttcattttggggt
gttacagaaccttcaatgtctcttattctcggatatgggtctgcagtcat
cgaattgctggccattgggagattgaccatgctccaaagagtatactggc
aacacagattacacttggtggggttttgtttttttgttgttgttgtttgg
tttgtttggggacaaaagggtaggagggtgggcctgggaggaatttcaag
aagcaagtgtgatagggtgctttgtatgaaatccccaaaaataagtaaca
aaaatattttgttgggtaaaaccctacttcatttggaaattaactgtttt
aaggtatggattc
ttacgttagaaaaaactacaagtggcaactctgggtatttggaacttgaa
aagaccccaaatattaaaaaaatataatatggtagggggatgcattgctt
cagaatgagcagtaagcaccaggattccatgtttctcaaatagacttaaa
agggaagatagagacaagaatcaaggccaacttgggtaaaataaggctgg
gatagagtgctaagagaagttaagtgtatatattaggtctctgtcacacc
tataacagtcatatgttcttgaacttgaagatgagatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_121676425_121676893
seq2: B6Ng01-260M10.b_42_510 (reverse)

seq1  GAATCTATACCTTAAAACAGTTGATTTCCAAATGAAGTAGGGTTTTACCC  50
      ||||| |||||||||||||||| |||||||||||||||||||||||||||
seq2  GAATCCATACCTTAAAACAGTTAATTTCCAAATGAAGTAGGGTTTTACCC  50

seq1  AACAAAATATTTTTGTTACTTATTTTTGGGGATTTCATACAAAGCACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATATTTTTGTTACTTATTTTTGGGGATTTCATACAAAGCACCCT  100

seq1  ATCACACTTGCTTCTTGAAATTCCTCCCAGGCCCACCCTCCTACCCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACTTGCTTCTTGAAATTCCTCCCAGGCCCACCCTCCTACCCTTTT  150

seq1  GTCCCCAAACAAACCAAACAACAACAACAAAAAAACAAAACCCCACCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAAACAAACCAAACAACAACAACAAAAAAACAAAACCCCACCAAG  200

seq1  TGTAATCTGTGTTGCCAGTATACTCTTTGGAGCATGGTCAATCTCCCAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATCTGTGTTGCCAGTATACTCTTTGGAGCATGGTCAATCTCCCAAT  250

seq1  GGCCAGCAATTCGATGACTGCAGACCCATATCCGAGAATAAGAGACATTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGCAATTCGATGACTGCAGACCCATATCCGAGAATAAGAGACATTG  300

seq1  AAGGTTCTGTAACACCCCAAAATGAAACAGTCCAGATAGGAAGCTACTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTTCTGTAACACCCCAAAATGAAACAGTCCAGATAGGAAGCTACTGA  350

seq1  AGAGAGTCCTTAAACACTGTTGTGAAGATACTGAAGTTCAGCTTTTCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGTCCTTAAACACTGTTGTGAAGATACTGAAGTTCAGCTTTTCTCA  400

seq1  GTTGATGGCTTCTGGTAGGACGTGGGGAAGGACCAAATGAAATAGCTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGGCTTCTGGTAGGACGTGGGGAAGGACCAAATGAAATAGCTTTT  450

seq1  ACGGGATTTTATGGAATTC  469
      |||||||||||||||||||
seq2  ACGGGATTTTATGGAATTC  469

seq1: chr7_121556182_121556458
seq2: B6Ng01-260M10.g_83_359

seq1  AAACTACAAGTGGCAACTCTGGGTATTTGGAACTTGACAAAGACCCC-GT  49
      ||||||||||||||||||||||||||||||||||||| |||||||||   
seq2  AAACTACAAGTGGCAACTCTGGGTATTTGGAACTTGA-AAAGACCCCAAA  49

seq1  TATTAAAAAAATATAATATGGTAGGGGGATGCATTGCTTCAGAATGAGCA  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAAAAATATAATATGGTAGGGGGATGCATTGCTTCAGAATGAGCA  99

seq1  GTAAGCACCAGGATTCCATG-CCATTGATTAAACTTAAAAGGGAAGATAG  148
      ||||||||||||||||||||    |  | || ||||||||||||||||||
seq2  GTAAGCACCAGGATTCCATGTTTCTCAAATAGACTTAAAAGGGAAGATAG  149

seq1  AGACAAGAATCAAGGCCAACTTGGGTAAAATAAGGCTGGGATAGAGTGCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGAATCAAGGCCAACTTGGGTAAAATAAGGCTGGGATAGAGTGCT  199

seq1  AAGAGAAGTTAAGTGTATATATTAGGTCTCTGTCACAACATATAACAGTC  248
      |||||||||||||||||||||||||||||||||||| || ||||||||||
seq2  AAGAGAAGTTAAGTGTATATATTAGGTCTCTGTCAC-ACCTATAACAGTC  248

seq1  ATATGTTCTTGAACTTGAAGATGAGAACT  277
      |||||||||||||||||||||||||| ||
seq2  ATATGTTCTTGAACTTGAAGATGAGATCT  277