BAC Information

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BAC

Clone NameB6Ng01-260O22
Chromosome7 (Build37)
Map Location 110,472,151 - 110,473,350
singlet/doubletsinglet
Overlap genenone
Upstream geneStim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666
Downstream geneOlfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-260O22.bB6Ng01-260O22.g
ACCGA065730GA065731
length1,2001,189
definitionB6Ng01-260O22.b B6Ng01-260O22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtaaagttattacaaggactgtgagtgtactggagaaaaatg
tattagatacaggcatggtgactgaccttgaatactctagcacttgaaag
gagaaaggacaaggaccatgagttcaagatcttttcaaatacatggcaaa
ttagaagctactctggataacttgagactgtatctcaagaaattagccaa
ctcaccagatgacccaacaggagagaagatacattggtaataatatgctt
tattagaattagcctaatagtttagagaattggctaatttgcctctaagt
atacatttataagtggaagctgacaaaaaggcattttagactcttctttt
ggataatatggtaaacttgtatttggggctatcatgtattatcttgtgtg
tggttaaaagaagaataaaaagccattgtaagagcagtggcacattaaaa
tacaaagcaaacaaacaaacaaggaaacaagcaaacaaaaacctgctgtc
ctaaaaaaaatggaatgacaaattttctgatgtttcaatagtgggaactt
tgaaaaacattcgtgaagtagattttcagtgcatttaaaagtaaaactat
tgactgtggtttcctctagaaacttaattctttcttggcattttcaagga
tttgtttacctttgtataacacatgaattcaggagacacatatatagaag
tggaatccacagaattgacattcattaaatagttgactgcagttgatgct
aagcagcacatgtgcatttgttaagaatagttgttactcatcaacgttag
ctcaaggtcttgacctagtatcttttgtccagcagatgacacagtttgca
aaagatgctaagccttgataggtaaccattaagaaatctctgaaactcat
gtttacttgacctggctactgcagttgtcagaatccccatgctatatgca
agactgtatagttcctattcttatattaatgaaaagacttttaaagtata
agtgaagttgaaagtgtatgtcctgatgctaagtaaatgaagtatgaatc
ataaagatacacccctcttggggagtagataaaaaataatttcttgactc
ctgctgtaatgtaaagtgcagtgctcttttagcaaaccatttcacggttt
ggaaacttgtggtaaatcaacaagccttaagccagaacccaggggcttta

gaattctgcctatataaaactggcatactggactaagaagagtagttggt
atccttatatttcattgcatgaaaagattattttaattttggaaaaaggc
ttattagtaagcattcataaatgtttctaaatgttatcattttaaaactg
taatggcagttactagtgtgttatgtggtctgtcctctatttaaatatct
aatattttctgtgtttttgtgctaaaacaaagctagagagtgcaagtttt
ctaccttatgtgtttgaggaaacagtggacctaatgatattttaagaaat
aattatcctgcttctattgaaaagaattatctatttcatgtgtgtgtccc
tgaagtaaaaaagaaaataaatgtgtttattccttattacaagtaaggca
gagaggaaaaaagtggaaatacagagaagaaagtgaaagaaatcaagaga
gcaaaagaaagacaaagggacattcaagtccccattcacacaaaccttac
acatacacatagttgacagtccagccaccatactttattcttttttccat
agcttatatatcccagcaaaatctttcaagcagtataaaattacaatgtg
gttatagtttagctttcttctagtaaatgattatgaaaaaatagtgtatt
tcccaatgcctttacaagaaattaaattacatcatacaggtaaagaaaac
aaacttattcccccaaactaacgtacatttgtaatcaagcaacatgttaa
agattaacaaaatgcaagcaagcaagataattttcttagccagtttctct
tacttgtaggcaacattttgcagttacaaagaaagaagtaattatttcat
tatttatctttaaaagtaatcttgtaagaatcttaaaagaatctcaaatc
taaacttttacataagaatcaatcatatctatcctaaaacctcaaaatgc
ctatctactcatcagcattcttaacaatcatatcagagctgagacaaaat
gggtgtaaaaaaatcattatcactagtcagcctagtggaggagtcatatc
cacccaggtgtttgcacttttcttgttcctgaccaataaagggtccttag
ctaacttaaagaagtggtgcatttctgaattgaaatggtctcctaagatt
cttttttttcctatacaaaagcccaggtggttaaaagac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110472151_110473350
seq2: B6Ng01-260O22.b_45_1244

seq1  GAATTCAAGTAAAGTTATTACAAGGACTGTGAGTGTACTGGAGAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTAAAGTTATTACAAGGACTGTGAGTGTACTGGAGAAAAATG  50

seq1  TATTAGATACAGGCATGGTGACTGACCTTGAATACTCTAGCACTTGAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGATACAGGCATGGTGACTGACCTTGAATACTCTAGCACTTGAAAG  100

seq1  GAGAAAGGACAAGGACCATGAGTTCAAGATCTTTTCAAATACATGGCAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGGACAAGGACCATGAGTTCAAGATCTTTTCAAATACATGGCAAA  150

seq1  TTAGAAGCTACTCTGGATAACTTGAGACTGTATCTCAAGAAATTAGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAGCTACTCTGGATAACTTGAGACTGTATCTCAAGAAATTAGCCAA  200

seq1  CTCACCAGATGACCCAACAGGAGAGAAGATACATTGGTAATAATATGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCAGATGACCCAACAGGAGAGAAGATACATTGGTAATAATATGCTT  250

seq1  TATTAGAATTAGCCTAATAGTTTAGAGAATTGGCTAATTTGCCTCTAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAATTAGCCTAATAGTTTAGAGAATTGGCTAATTTGCCTCTAAGT  300

seq1  ATACATTTATAAGTGGAAGCTGACAAAAAGGCATTTTAGACTCTTCTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATTTATAAGTGGAAGCTGACAAAAAGGCATTTTAGACTCTTCTTTT  350

seq1  GGATAATATGGTAAACTTGTATTTGGGGCTATCATGTATTATCTTGTGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATATGGTAAACTTGTATTTGGGGCTATCATGTATTATCTTGTGTG  400

seq1  TGGTTAAAAGAAGAATAAAAAGCCATTGTAAGAGCAGTGGCACATTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTAAAAGAAGAATAAAAAGCCATTGTAAGAGCAGTGGCACATTAAAA  450

seq1  TACAAAGCAAACAAACAAACAAGGAAACAAGCAAACAAAAACCTGCTGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCAAACAAACAAACAAGGAAACAAGCAAACAAAAACCTGCTGTC  500

seq1  CTAAAAAAAATGGAATGACAAATTTTCTGATGTTTCAATAGTGGGAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAAAAATGGAATGACAAATTTTCTGATGTTTCAATAGTGGGAACTT  550

seq1  TGAAAAACATTCGTGAAGTAGATTTTCAGTGCATTTAAAAGTAAAACTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAACATTCGTGAAGTAGATTTTCAGTGCATTTAAAAGTAAAACTAT  600

seq1  TGACTGTGGTTTCCTCTAGAAACTTAATTCTTTCTTGGCATTTTCAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTGTGGTTTCCTCTAGAAACTTAATTCTTTCTTGGCATTTTCAAGGA  650

seq1  TTTGTTTACCTTTGTATAACACATGAATTCAGGAGACACATATATAGAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTACCTTTGTATAACACATGAATTCAGGAGACACATATATAGAAG  700

seq1  TGGAATCCACAGAATTGACATTCATTAAATAGTTGACTGCAGTTGATGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATCCACAGAATTGACATTCATTAAATAGTTGACTGCAGTTGATGCT  750

seq1  AAGCAGCACATGTGCATTTGTTAAGAATAGTTGTTACTCATCAACGTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCACATGTGCATTTGTTAAGAATAGTTGTTACTCATCAACGTTAG  800

seq1  CTCAAGGTCTTGACCTAGTATCTTTTGTCCAGCAGATGACACAGTTTGCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGTCTTGACCTAGTATCTTTTGTCCAGCAGATGACACAGTTTGCA  850

seq1  AAAGATGCTAAGCCTTGATAGGTAACCATTAAGAAATCTCTGAAACTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCTAAGCCTTGATAGGTAACCATTAAGAAATCTCTGAAACTCAT  900

seq1  GTTTACTTGACCTGGCTACTGCAGTTGTCAGAATCCCCATGCTATATGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTACTTGACCTGGCTACTGCAGTTGTCAGAATCCCCATGCTATATGCA  950

seq1  AGACTGTATAGTTCCTATTCTTATATTAATGAAAAGACTTTTAAAGTATA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTATAGTTCCTATTCTTATATTAATGAAAAGACTTTTAAAGTATA  1000

seq1  AGTGAAGTTGAAAGTGTATGTCCTGATGCTTAAGGTAAATGAAGGTATGA  1050
      ||||||||||||||||||||||||||||||  | ||||||||| ||||||
seq2  AGTGAAGTTGAAAGTGTATGTCCTGATGCT--AAGTAAATGAA-GTATGA  1047

seq1  ATCATAAAGATAACAACCCTCTTGGGGAGTTAGATAAAAATAATTTTCTT  1100
      ||||||||||| ||| ||||||||||||| ||||||||||  | ||||||
seq2  ATCATAAAGAT-ACACCCCTCTTGGGGAG-TAGATAAAAAATAATTTCTT  1095

seq1  GACTCCTGCTGTAGTGTAAAGTGCAGTGGCTCTTTTAGCAA--CATTTCA  1148
      ||||||||||||| ||||||||||||| |||||||||||||  |||||||
seq2  GACTCCTGCTGTAATGTAAAGTGCAGT-GCTCTTTTAGCAAACCATTTCA  1144

seq1  ATGTGTTGAAACTTTGTGGGAATACAACCAGCC-TAAGCCAGA--CCA--  1193
        || | ||||| |||||| ||  |||| |||| |||||||||  |||  
seq2  CGGTTTGGAAAC-TTGTGGTAAATCAACAAGCCTTAAGCCAGAACCCAGG  1193

seq1  GGCTTTA  1200
      |||||||
seq2  GGCTTTA  1200