BAC Information

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BAC

Clone NameB6Ng01-262E21
Chromosome7 (Build37)
Map Location 109,834,894 - 109,955,223
singlet/doubletdoublet
Overlap geneTrim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564
Upstream geneClpb, Phox2a, Inppl1, Folr2, Folr1, 3200002M19Rik, F930017I19Rik, 2400001E08Rik, Lrrc51, LOC667222, Numa1, Il18bp, Rnf121, Trpc2, Art5, Art1, Chrna10, Nup98, Frag1, Rhog, Stim1, Rrm1, Olfr543, Olfr544, Olfr545, LOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556
Downstream geneOlfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262E21.bB6Ng01-262E21.g
ACCGA066757GA066758
length1,1341,106
definitionB6Ng01-262E21.b B6Ng01-262E21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(109,954,089 - 109,955,223)(109,834,894 - 109,836,020)
sequence
gaattcagccttctgagataaaaaaaaaaaattaatgttttcatgacctt
atattactttaatgatccttccaggaaagatttttctcctgtagtcatag
tggcacaagtgttatgaaataagtacccactttctgatcagatttgaacc
ctgttccacaagagacagtttcatacttgatattgaaatcctgctcaaag
ctcatggctagggagctcacatgcccaaagggagaatctactgttgttat
tttgctcaataatcatggtgtcaaattgccttctaaatattcatgcttat
actcacagatctaggctgctctcagcctttgtcagaaaatcttctttatg
tcctgggcaatcaacaaggagatacataagtggttaaagtactaaaagta
gtgaccgagtgttcagctctaatcaggatagctgtattaccctcaccttc
accccaaggcttacaaaaattaatttatatgtaaatgatctttgcaaaat
catgagaacagaattattaagtagtgaacacaaagctagtacaatggaaa
aaaattatacattaaagtttagtaagacatagctatttttcacagaaggc
ttataataaaattttcctagaaactgggagaaattatgaatatttgtcaa
ttctccatagaaatacacatgatatgatttgttaaaatattaatataatt
tttaatttttacttctatatatgtgtgtattttattaggtattttttaaa
atattcattgcacatgactgtatacatgagtatgccctcacacaaatata
tgtcacacactgtgaacaccaccaccatgctcttctctcctgccctttct
cactactccacttcttcctatccccttattctcctaggcactcttccctc
tgctatcaaggcttatatgcattcatgatttttcatagttctataaaact
acaaaccacactgacagaaaacacaatatttcttttcttctgggattaga
tttatttaatattgagaactccagctgcatccattttctgaaactgtact
ttattctcaagaattagaaaagagtgaccatcattgggaagagaaagccc
ctgctagcaaccttttatatgcaccagttacagg
gaattcaatgtaaatgtttaggcatagctgatagtagaggtgttaatatc
ttcatctaaggcagtgtgcatgtgtccacctgttcatgctttggtgtcaa
aagcactacttaaagctacagaaaaccaaaaaaacccccaaacaacaaca
acaacaacaacaacaacaacaacaacaacaacaacaaccagacaaaacag
cagatgaaaatttggaagacactggcagtaggaaagcgaggcaaagaaag
atagaaatgataaatcaagataaatcacaaaaatgtagtggaagcatgtt
agttctatacattgcctcaaaaaatgtaaacatgggaaagatgtcaaaga
tctggagataaatacagttttccaatagaggatctccaatagagatcttt
tatcaaacataaatacttggtcaaaagtttgactcattaactgctcagac
ctgtccaacctgtagctgagggcagctgtgaatacaggccaaacacaaaa
ctgtaaaatgttaagtttctttatgcgattttgttctccagagtgaactt
tgtagactacaatatcaaaaggttgcacctagcaaccagtgcctccacgg
tcctcagggccgcgaagggagggggaagagcctggaagcggcagaaacca
gcctcgggtctggaagcagtggcggtccgtgccttcctgaccttcgggca
ctaggcagttccccagggcggtgggattgggaacaggggagggtaaagag
ggcaggacctgtgttgtcctccaaagaggtctgctgtcgcctccttctct
aagcagctgtggaggcgcggggctccagcggtccaatccgcagcgtagga
agcagcggggcgctcgcccgccgcccggaagccgcgatagcagcgggggc
gagggacccaaaggcaagagccgcgcccggagctgcaggacccacccact
gcgccggaaccgacgaatcacttctgcactcagagtggcctgattggctg
tcgcttgccacgttcctggtgatcagctactagcgtggtgcgcagcggcc
ttctagtgcacttacgcatgatcgcagttccctgaaccgactgcaagtgg
cctgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_109954089_109955223
seq2: B6Ng01-262E21.b_44_1177 (reverse)

seq1  CCTGT-ACTGGTGCATAT-AAAGTTTGCTAGACCAAGGGGCTTCTCTTCC  48
      ||||| |||||||||||| |||| |||||||  || |||  |||||||||
seq2  CCTGTAACTGGTGCATATAAAAGGTTGCTAG--CAGGGGCTTTCTCTTCC  48

seq1  CAATGATGGTCACTCTTTTCTAA-TCTTGAAGAATAAAGTTACAGTTTTC  97
      ||||||||||||||||||||||| ||||| ||||||||| ||||| ||||
seq2  CAATGATGGTCACTCTTTTCTAATTCTTG-AGAATAAAG-TACAG-TTTC  95

seq1  AGAAAAATGGATGCAGCTGGAGTTCTCAATATTAAATAAATCTAATCCCA  147
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AG-AAAATGGATGCAGCTGGAGTTCTCAATATTAAATAAATCTAATCCCA  144

seq1  GAAGAAA--GAATATTGTG-TTTCTGTCAGTGTGGTTTGTAGTTTTTATA  194
      |||||||   ||||||||| |||||||||||||||||||||| |||||||
seq2  GAAGAAAAGAAATATTGTGTTTTCTGTCAGTGTGGTTTGTAG-TTTTATA  193

seq1  GAACTATGAAAAATCATGAATGCATATAAGCCTTGATAGCAGAGGGAAGA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTATGAAAAATCATGAATGCATATAAGCCTTGATAGCAGAGGGAAGA  243

seq1  GTGCCTAGGAGAATAAGGGGATAGGAAGAAGTGGAGTAGTGAGAAAGGGC  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTAGGAGAATAAGGGGATAGGAAGAAGTGGAGTAGTGAGAAAGGGC  293

seq1  AGGAGAGAAGAGCATGGTGGTGGTGTTCACAGTGTGTGACATATATTTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAGAAGAGCATGGTGGTGGTGTTCACAGTGTGTGACATATATTTGT  343

seq1  GTGAGGGCATACTCATGTATACAGTCATGTGCAATGAATATTTTAAAAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGGCATACTCATGTATACAGTCATGTGCAATGAATATTTTAAAAAA  393

seq1  TACCTAATAAAATACACACATATATAGAAGTAAAAATTAAAAATTATATT  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTAATAAAATACACACATATATAGAAGTAAAAATTAAAAATTATATT  443

seq1  AATATTTTAACAAATCATATCATGTGTATTTCTATGGAGAATTGACAAAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAACAAATCATATCATGTGTATTTCTATGGAGAATTGACAAAT  493

seq1  ATTCATAATTTCTCCCAGTTTCTAGGAAAATTTTATTATAAGCCTTCTGT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAATTTCTCCCAGTTTCTAGGAAAATTTTATTATAAGCCTTCTGT  543

seq1  GAAAAATAGCTATGTCTTACTAAACTTTAATGTATAATTTTTTTCCATTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATAGCTATGTCTTACTAAACTTTAATGTATAATTTTTTTCCATTG  593

seq1  TACTAGCTTTGTGTTCACTACTTAATAATTCTGTTCTCATGATTTTGCAA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAGCTTTGTGTTCACTACTTAATAATTCTGTTCTCATGATTTTGCAA  643

seq1  AGATCATTTACATATAAATTAATTTTTGTAAGCCTTGGGGTGAAGGTGAG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATTTACATATAAATTAATTTTTGTAAGCCTTGGGGTGAAGGTGAG  693

seq1  GGTAATACAGCTATCCTGATTAGAGCTGAACACTCGGTCACTACTTTTAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAATACAGCTATCCTGATTAGAGCTGAACACTCGGTCACTACTTTTAG  743

seq1  TACTTTAACCACTTATGTATCTCCTTGTTGATTGCCCAGGACATAAAGAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAACCACTTATGTATCTCCTTGTTGATTGCCCAGGACATAAAGAA  793

seq1  GATTTTCTGACAAAGGCTGAGAGCAGCCTAGATCTGTGAGTATAAGCATG  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTGACAAAGGCTGAGAGCAGCCTAGATCTGTGAGTATAAGCATG  843

seq1  AATATTTAGAAGGCAATTTGACACCATGATTATTGAGCAAAATAACAACA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTAGAAGGCAATTTGACACCATGATTATTGAGCAAAATAACAACA  893

seq1  GTAGATTCTCCCTTTGGGCATGTGAGCTCCCTAGCCATGAGCTTTGAGCA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGATTCTCCCTTTGGGCATGTGAGCTCCCTAGCCATGAGCTTTGAGCA  943

seq1  GGATTTCAATATCAAGTATGAAACTGTCTCTTGTGGAACAGGGTTCAAAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTCAATATCAAGTATGAAACTGTCTCTTGTGGAACAGGGTTCAAAT  993

seq1  CTGATCAGAAAGTGGGTACTTATTTCATAACACTTGTGCCACTATGACTA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAGAAAGTGGGTACTTATTTCATAACACTTGTGCCACTATGACTA  1043

seq1  CAGGAGAAAAATCTTTCCTGGAAGGATCATTAAAGTAATATAAGGTCATG  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGAAAAATCTTTCCTGGAAGGATCATTAAAGTAATATAAGGTCATG  1093

seq1  AAAACATTAATTTTTTTTTTTTATCTCAGAAGGCTGAATTC  1135
      |||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTAATTTTTTTTTTTTATCTCAGAAGGCTGAATTC  1134

seq1: chr7_109834894_109836020
seq2: B6Ng01-262E21.g_69_1174

seq1  GAATTCAATGTAAATGTTTAGGCATAGCTGATAGTAGAGGTGTTAATATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGTAAATGTTTAGGCATAGCTGATAGTAGAGGTGTTAATATC  50

seq1  TTCATCTAAGGCAGTGTGCATGTGTCCACCTGTTCATGCTTTGGTGTCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTAAGGCAGTGTGCATGTGTCCACCTGTTCATGCTTTGGTGTCAA  100

seq1  AAGCACTACTTAAAGCTACAGAAAACCAAAAAAACCCCCAAACAACAACA  150
      ||||||||||||||||||||||||||||||||||||||||   |||||||
seq2  AAGCACTACTTAAAGCTACAGAAAACCAAAAAAACCCCCA---AACAACA  147

seq1  ACAACAACAACAACAACAACAACAACAACAACAACAACAACCAGACAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAACAACAACAACAACAACAACAACAACAACAACAACCAGACAAAA  197

seq1  CAGCAGATGAAAATTTGGAAGACACTGGCAGTAGGAAAGCGAGGCAAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAGATGAAAATTTGGAAGACACTGGCAGTAGGAAAGCGAGGCAAAGA  247

seq1  AAGATAGAAATGATAAATCAAGATAAATCACAAAAATGTAGTGGAAGCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATAGAAATGATAAATCAAGATAAATCACAAAAATGTAGTGGAAGCAT  297

seq1  GTTAGTTCTATACATTGCCTCAAAAAATGTAAACATGGGAAAGATGTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGTTCTATACATTGCCTCAAAAAATGTAAACATGGGAAAGATGTCAA  347

seq1  AGATCTGGAGATAAATACAGTTTTCCAATAGAGGATCTCCAATAGAGATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGGAGATAAATACAGTTTTCCAATAGAGGATCTCCAATAGAGATC  397

seq1  TTTTATCAAACATAAATACTTGGTCAAAAGTTTGACTCATTAACTGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCAAACATAAATACTTGGTCAAAAGTTTGACTCATTAACTGCTCA  447

seq1  GACCTGTCCAACCTGTAGCTGAGGGCAGCTGTGAATACAGGCCAAACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGTCCAACCTGTAGCTGAGGGCAGCTGTGAATACAGGCCAAACACA  497

seq1  AAACTGTAAAATGTTAAGTTTCTTTATGCGATTTTGTTCTCCAGAGTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGTAAAATGTTAAGTTTCTTTATGCGATTTTGTTCTCCAGAGTGAA  547

seq1  CTTTGTAGACTACAATATCAAAAGGTTGCACCTAGCAACCAGTGCCTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGACTACAATATCAAAAGGTTGCACCTAGCAACCAGTGCCTCCA  597

seq1  CGGTCCTCAGGGCCGCGAAGGGAGGGGGAAGAGCCTGGAAGCGGCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTCCTCAGGGCCGCGAAGGGAGGGGGAAGAGCCTGGAAGCGGCAGAAA  647

seq1  CCAGCCTCGGGTCTGGAAGCAGTGGCGGTCCGTGCCTTCCTGACCTTCGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCTCGGGTCTGGAAGCAGTGGCGGTCCGTGCCTTCCTGACCTTCGG  697

seq1  GCACTAGGCAGTTCCCCAGGGCGGTGGGATTGGGAACAGGGGAGGGTAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGGCAGTTCCCCAGGGCGGTGGGATTGGGAACAGGGGAGGGTAAA  747

seq1  GAGGGCAGGACCTGTGTTGTCCTCCAAAGAGGTCTGCTGTCGCCTCCTTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAGGACCTGTGTTGTCCTCCAAAGAGGTCTGCTGTCGCCTCCTTC  797

seq1  TCTAAGCAGCTGTGGAGGCGCGGGGCTCCAGCGGTCCAATCCGCAGCGTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCAGCTGTGGAGGCGCGGGGCTCCAGCGGTCCAATCCGCAGCGTA  847

seq1  GGAAGCAGCGGGGCGCTCGCCCGCCG-CCGGAAGCCGCGATAGCAGCGGG  899
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GGAAGCAGCGGGGCGCTCGCCCGCCGCCCGGAAGCCGCGATAGCAGCGGG  897

seq1  GGCGAGGGACCC-AAGGCAAGAGCCGCGCCCGGAGCTGCAGGACCCACCC  948
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GGCGAGGGACCCAAAGGCAAGAGCCGCGCCCGGAGCTGCAGGACCCACCC  947

seq1  ACTGCGCCGGAACCGACGAATCACTTCTGCACTCAGAGTGGCCTGATTGG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCGCCGGAACCGACGAATCACTTCTGCACTCAGAGTGGCCTGATTGG  997

seq1  CTGTTCGCTTGCCACGTTTCCTGGTTGAATTCAGCTACCTAGCGTGGGTG  1048
      ||| |||||||||||| ||||||| |||  ||||||| ||||||| ||||
seq2  CTG-TCGCTTGCCACG-TTCCTGG-TGA--TCAGCTA-CTAGCGT-GGTG  1040

seq1  CGCAGCCGGGCTTCCTTAAGTGGCACCTTTACGCATTGGAATCCGCAGTT  1098
      ||||| ||| ||||    ||| ||||  ||||||||  ||   |||||||
seq2  CGCAG-CGGCCTTC---TAGT-GCAC--TTACGCAT--GA--TCGCAGTT  1079

seq1  CCCTGGAACACGAGCTGCAAGTGG-CTGCT  1127
      |||| |||| ||| |||||||||| |||||
seq2  CCCT-GAAC-CGA-CTGCAAGTGGCCTGCT  1106