BAC Information

Click to search

BAC

Clone NameB6Ng01-262G21
Chromosome7 (Build37)
Map Location 116,418,266 - 116,419,392
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr489-ps1, Olfr490, LOC626881, Olfr491, Olfr492, Olfr493, Olfr494, Olfr495, Olfr496-ps1, Olfr497, Olfr498, Olfr499-ps1, Olfr500-ps1, Olfr501-ps1, Olfr502, LOC269980, Olfr503, Olfr504, Olfr505-ps1, Olfr506, Olfr507, Olfr508, Olfr509, Olfr510, Olfr511-ps1, Olfr512, Olfr513, Olfr514, Olfr515-ps1, Olfr516, Olfr517, Olfr518, Olfr519, Nlrp10, Eif3s5, BC049265, Tub, Ric3, Lmo1
Downstream geneStk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143, Wee1, Swap70
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262G21.bB6Ng01-262G21.g
ACCGA066847GA066848
length1,119348
definitionB6Ng01-262G21.b B6Ng01-262G21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgcctctggagaaaggcagctcccatcccagggagcaagtc
ctgaaggtggaaattcataaggcaggagctgaggtaacatccggtctgtg
gtgctgtaagtttggcttaggagaaaagatgaggtcttctatcttctgat
ttgttttactttttgtgtacatatagtgtgttgggtgctcatgtttgtgt
atgtgcacatgtgtgcgcctgcatgttcaggccaggggttgatatcaatt
atctttcttctaccactctaaaccttattgattgagacaggtctctcact
gagcccagaggccactgattggatagctggctagtccgcaagctctggtg
atccacctgtcctgtttgcccaacactggggttacagatgtatggcacca
tccacagttctcatgtgtgtcctggggatgtgaactggggtcctcatgtt
tgcttcctagcaattaaatttaacttaataaataccatctgtcctttatg
ttgcttccacagggcctgatgctgggttagggggatgaggacctctgagg
ctgtcatcccttccccagagtctagctcttatgcttggttcagctctggg
gagcatggtgccagggaaagtgcctgggcaatggcaccattcatcttctt
agtatcccacttcctgctttgtactgctgttcaaagtgaggctgaccatc
ggccgggcagagctgggaggacccaccatgcctgggcccctggaaggctg
cactgggaaacttagggaaatgctgaggactggcatagcgaggcacacac
aaatgcaaggcagccactcaatgtggctttcctttgaagaacaaaggcag
agaaaattggctcaccaacgagaattaagtggtacatacacggcacggaa
atcaaatcagttcaaaactggcttgctcagaaaatatgattctgagagga
aagctgattatgtgaggcctttggatagtggtgtttagtttaaaaggctt
ttgtaggagattttatgcctcagagaaagagagggtggagaagcccagct
caaggccttctgactcactgcaagtccggaatcaatctgtgcatatctat
ggggctgcatcttggtgtg
caggaccaggaacgggagtggaagagttgtggagtagggggaggcgggaa
gggataggagatttttggaggggaagctagaaaggggataacatttgaaa
tgtaaataaaaaaatatctaataaaaatagcctttttcttcacacatttt
ttttttaaacagtagcatttggttttacactaggaccctgggttatctag
tctcaggttcttggttatctaagcagtattgattatagtttccaagtcac
ggagtgggccttaagtcaaatcaaatagtggttggttactcccacagctt
tgagtgccactaatacaccactgtaaatcaaatacatcattgtttgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_116418266_116419392
seq2: B6Ng01-262G21.b_47_1165

seq1  GAATTCATCTGCCTCTGGAGAAAGGCAGCTCCCATCCCAGGGAGCAAGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGCCTCTGGAGAAAGGCAGCTCCCATCCCAGGGAGCAAGTC  50

seq1  CTGAAGGTGGAAATTCATAAGGCAGGAGCTGAGGTAACATCCGGTCTGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGTGGAAATTCATAAGGCAGGAGCTGAGGTAACATCCGGTCTGTG  100

seq1  GTGCTGTAAGTTTGGCTTAGGAGAAAAGATGAGGTCTTCTATCTTCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGTAAGTTTGGCTTAGGAGAAAAGATGAGGTCTTCTATCTTCTGAT  150

seq1  TTGTTTTACTTTTTGTGTACATATAGTGTGTTGGGTGCTCATGTTTGTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTACTTTTTGTGTACATATAGTGTGTTGGGTGCTCATGTTTGTGT  200

seq1  ATGTGCACATGTGTGCGCCTGCATGTTCAGGCCAGGGGTTGATATCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCACATGTGTGCGCCTGCATGTTCAGGCCAGGGGTTGATATCAATT  250

seq1  ATCTTTCTTCTACCACTCTAAACCTTATTGATTGAGACAGGTCTCTCACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTCTTCTACCACTCTAAACCTTATTGATTGAGACAGGTCTCTCACT  300

seq1  GAGCCCAGAGGCCACTGATTGGATAGCTGGCTAGTCCGCAAGCTCTGGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCCAGAGGCCACTGATTGGATAGCTGGCTAGTCCGCAAGCTCTGGTG  350

seq1  ATCCACCTGTCCTGTTTGCCCAACACTGGGGTTACAGATGTATGGCACCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCACCTGTCCTGTTTGCCCAACACTGGGGTTACAGATGTATGGCACCA  400

seq1  TCCACAGTTCTCATGTGTGTCCTGGGGATGTGAACTGGGGTCCTCATGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAGTTCTCATGTGTGTCCTGGGGATGTGAACTGGGGTCCTCATGTT  450

seq1  TGCTTCCTAGCAATTAAATTTAACTTAATAAATACCATCTGTCCTTTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTAGCAATTAAATTTAACTTAATAAATACCATCTGTCCTTTATG  500

seq1  TTGCTTCCACAGGGCCTGATGCTGGGTTAGGGGGATGAGGACCTCTGAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTCCACAGGGCCTGATGCTGGGTTAGGGGGATGAGGACCTCTGAGG  550

seq1  CTGTCATCCCTTCCCCAGAGTCTAGCTCTTATGCTTGGTTCAGCTCTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCATCCCTTCCCCAGAGTCTAGCTCTTATGCTTGGTTCAGCTCTGGG  600

seq1  GAGCATGGTGCCAGGGAAAGTGCCTGGGCAATGGCACCATTCATCTTCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGGTGCCAGGGAAAGTGCCTGGGCAATGGCACCATTCATCTTCTT  650

seq1  AGTATCCCACTTCCTGCTTTGTACTGCTGTTCAAAGTGAGGCTGACCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCCACTTCCTGCTTTGTACTGCTGTTCAAAGTGAGGCTGACCATC  700

seq1  GGCCGGGCAGAGCTGGGAGGACCCACCATGCCTGGGCCCCTGGAAGGCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCGGGCAGAGCTGGGAGGACCCACCATGCCTGGGCCCCTGGAAGGCTG  750

seq1  CACTGGGAAACTTAGGGAAATGCTGAGGACTGGCATAGCGAGGCACACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGAAACTTAGGGAAATGCTGAGGACTGGCATAGCGAGGCACACAC  800

seq1  AAATGCAAGGCAGCCACTCAATGTGGCTTTCCTTTGAAGAACAAAGGCAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCAAGGCAGCCACTCAATGTGGCTTTCCTTTGAAGAACAAAGGCAG  850

seq1  AGAAAATTGGCTCACCAACGAGAATTAAGTGGTAACAATACACGGCACGG  900
      ||||||||||||||||||||||||||||||||||   |||||||||||||
seq2  AGAAAATTGGCTCACCAACGAGAATTAAGTGGTA--CATACACGGCACGG  898

seq1  AAATCAAAATCAGTTCAAAACTGGCTTGCTCAGAAAAATATGATTCTGAA  950
      ||||| ||||||||||||||||||||||||||| |||||||||||||| |
seq2  AAATC-AAATCAGTTCAAAACTGGCTTGCTCAG-AAAATATGATTCTG-A  945

seq1  GAGGAAAGCTGAATTATGTGAGGCCTTTGAATAGTGGTGTTTTAGTTTAA  1000
      ||||||||||| ||||||||||||||||| ||||||||| ||||||||||
seq2  GAGGAAAGCTG-ATTATGTGAGGCCTTTGGATAGTGGTG-TTTAGTTTAA  993

seq1  AAGGCTTTTGTAAGGAGATTTTAGTGCTCAGAGAAAGAGAGGGTGGAGAA  1050
      ||||||||||| |||||||||||   ||||||||||||||||||||||||
seq2  AAGGCTTTTGT-AGGAGATTTTATGCCTCAGAGAAAGAGAGGGTGGAGAA  1042

seq1  GCCCAGCCCA--GGCTTCTGACTCACTGCAAGTTCCCCGGAGTTCATCTG  1098
      ||||||| ||  | |||||||||||||||||||   ||||| |  |||||
seq2  GCCCAGCTCAAGGCCTTCTGACTCACTGCAAGT---CCGGAATCAATCTG  1089

seq1  TGCATATCTATGGGGGCTGCATCT--GTGTG  1127
      ||||||||||| ||||||||||||  |||||
seq2  TGCATATCTAT-GGGGCTGCATCTTGGTGTG  1119