BAC Information

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BAC

Clone NameB6Ng01-263C11
Chromosome7 (Build37)
Map Location 33,006,315 - 33,007,448
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842
Downstream geneLOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373, LOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411, LOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263C11.bB6Ng01-263C11.g
ACCGA067392GA067393
length1,1791,116
definitionB6Ng01-263C11.b B6Ng01-263C11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcaaagaagcacctgaaaaaatg
ttcaacatccttactcatcagggaaatgcaaatcaaaacaacccagagat
tccacttcacaccagtcagaatggctaagatgaaaaattcacgtgacagc
agatgctggtgagggtgtggagaaagaggaacactcctcaattcttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaatttgacatagtactagcggagtatccagcaacacctctaatggac
atatatccagaagatgtcccaaaaggtaagaaggacacatggtccactat
gttcatagcagcctcatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaacatgtggtacatttacaaatgg
agtactactcagctagtaaaaagaataaatttatgaaaatcctaggcaaa
tggatggacctggaggtcatcattctgagtgaggtaacccaatcacaaag
gcactcacacagtatgtactcactgatatgtggatattagctcagaaact
taggatacccaagatataagatacaatttgcttgactcatgaatctcaac
gaagaccaaagtggacactttgccccttcttagaattgggatcaaaacac
ccatggaaggagttacagagacaatatttggagctgtgacgaaaggatgg
accatctagtgattgccatatccaggggtccatcccatcattagcttcca
aactctgacaccattgcatacactagcaagattttgctgaaaggacccag
atatagctgtctcttgtgagactatgccggggccaagcaaacacagaagt
ggaagctcacagtcagctatttaatggatcacagggccccaatggaggag
ctagtgaaagcacccaagaactaaagggaattgcaaccctatcgttggaa
caacatacgactaccagtaccccgggagcttcttgtctctagctgcatat
gtatcaaagatggccaagtcggccattaatgaaagagaaggcccaattgg
acttgcaaactttatatgcccagtacaggcaacaccagcgccaaaggggg
gattggggtgggttcagagagtgggggat
gaattctgtcatagcaaagatccgctggatacactggcacagatggactg
atgctgaatgttctggagcttgggaatccagctgagattggcctctaatt
tttacagggtagctgtggaatattcaaaatggccatcatgcaggcatttt
gatcagtagtcagaatagctagagcagcaatgtagagtctggcggtgacc
aattaggggtccaggtaggtctgaactgaaatgcccttgcttagatataa
gaaaaagagcacaaggcacttgatgtgaaaacttaattaacacactaata
atgtttattaacagggtcttcctgtgtaattttgggtagcctagaactct
ttgtgtagaccagactgtcctcaaactcacaaagataggaacactcttcc
tccaaaatactgagatcaaagttgagaattatcataccagcacattgtta
atagattttgacaatgatttccaccagccccaaagaaagttgaatccacc
acacatacacataaacagatgtacagacaaactggcccacagacagacag
aagacaggcagtcagacaggaccacacacccatttcccaggaaggttatg
aggtcaagaccaacctgggcaagatctttttaaaaaaaacaaaaacaaaa
aactaaaagaacaataaacaaacaaacaagaaaacaaagaaacaaaacag
aaaacctcaaccatgggtttaagaagtgaggtttaggtagaagtgaaagt
actttccttttattccactatgcacatgggagagagtcacaaagatttct
gtgagtccaaggctaaccagatatacatatttccaggacagcctggtcct
ataaggtaggtcccctgctccacccaacttggaaacagattgcttaagcc
cattccctctgataggagatacactggcttccctggcattgacatttagc
ttgatgaaagggttcttttgacagctcttttgtcttctttaaggaagtgt
gggctgtgtagagagacctatctcagaaaaaaataaaaaccacacaaaaa
ggtaaatgagatgctacaaatcagatagcatgtgaagagactggttcaag
cagtacaaaacatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33006315_33007448
seq2: B6Ng01-263C11.g_65_1180

seq1  GAATTCTGTCATAGCAAAGATCCGCTGGATACACTGGCACAGATGGACTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCATAGCAAAGATCCGCTGGATACACTGGCACAGATGGACTG  50

seq1  ATGCTGAATGTTCTGGAGCTTGGGAATCCAGCTGAGATTGGCCTCTAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAATGTTCTGGAGCTTGGGAATCCAGCTGAGATTGGCCTCTAATT  100

seq1  TTTACAGGGTAGCTGTGGAATATTCAAAATGGCCATCATGCAGGCATTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAGGGTAGCTGTGGAATATTCAAAATGGCCATCATGCAGGCATTTT  150

seq1  GATCAGTAGTCAGAATAGCTAGAGCAGCAATGTAGAGTCTGGCGGTGACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGTAGTCAGAATAGCTAGAGCAGCAATGTAGAGTCTGGCGGTGACC  200

seq1  AATTAGGGGTCCAGGTAGGTCTGAACTGAAATGCCCTTGCTTAGATATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGGGTCCAGGTAGGTCTGAACTGAAATGCCCTTGCTTAGATATAA  250

seq1  GAAAAAGAGCACAAGGCACTTGATGTGAAAACTTAATTAACACACTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGAGCACAAGGCACTTGATGTGAAAACTTAATTAACACACTAATA  300

seq1  ATGTTTATTAACAGGGTCTTCCTGTGTAATTTTGGGTAGCCTAGAACTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTATTAACAGGGTCTTCCTGTGTAATTTTGGGTAGCCTAGAACTCT  350

seq1  TTGTGTAGACCAGACTGTCCTCAAACTCACAAAGATAGGAACACTCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAGACCAGACTGTCCTCAAACTCACAAAGATAGGAACACTCTTCC  400

seq1  TCCAAAATACTGAGATCAAAGTTGAGAATTATCATACCAGCACATTGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAATACTGAGATCAAAGTTGAGAATTATCATACCAGCACATTGTTA  450

seq1  ATAGATTTTGACAATGATTTCCACCAGCCCCAAAGAAAGTTGAATCCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTTGACAATGATTTCCACCAGCCCCAAAGAAAGTTGAATCCACC  500

seq1  ACACATACACATAAACAGATGTACAGACAAACTGGCCCACAGACAGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACATAAACAGATGTACAGACAAACTGGCCCACAGACAGACAG  550

seq1  AAGACAGGCAGTCAGACAGGACCACACACCCATTTCCCAGGAAGGTTATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGCAGTCAGACAGGACCACACACCCATTTCCCAGGAAGGTTATG  600

seq1  AGGTCAAGACCAACCTGGGCAAGATCTTTTTAAAAAAAACAAAAACAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAGACCAACCTGGGCAAGATCTTTTTAAAAAAAACAAAAACAAAA  650

seq1  AACTAAAAGAACAATAAACAAACAAACAAGAAAACAAAGAAACAAAACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAAGAACAATAAACAAACAAACAAGAAAACAAAGAAACAAAACAG  700

seq1  AAAACCTCAACCATGGGTTTAAGAAGTGAGGTTTAGGTAGAAGTGAAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCTCAACCATGGGTTTAAGAAGTGAGGTTTAGGTAGAAGTGAAAGT  750

seq1  ACTTTCCTTTTATTCCACTATGCACATGGGAGAGAGTCACAAAGATTTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCTTTTATTCCACTATGCACATGGGAGAGAGTCACAAAGATTTCT  800

seq1  GTGAGTCCAAGGCTAACCAGATATACATATTTCCAGGACAGCCTGGTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCAAGGCTAACCAGATATACATATTTCCAGGACAGCCTGGTCCT  850

seq1  ATAAGGTAGGTCCCCTGCTCCACCCAACTTGGAAACAGATTGCTTAAGCC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTAGGTCCCCTGCTCCACCCAACTTGGAAACAGATTGCTTAAGCC  900

seq1  CATTCCCTCTGATAGGAGATACACTGGCTTCCCTGGCATTGACAATTTAG  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||| 
seq2  CATTCCCTCTGATAGGAGATACACTGGCTTCCCTGGCATTGAC-ATTTA-  948

seq1  GCTTGATGAAAGGGTTCTTTTGACAGCTCTTTTGTCCTTCTTT-AGGAAG  999
      ||||||||||||||||||||||||||||||||||| ||||||| ||||||
seq2  GCTTGATGAAAGGGTTCTTTTGACAGCTCTTTTGT-CTTCTTTAAGGAAG  997

seq1  TGTGGGCTGTGTAGAGAGACCCTATCTCAGAAAAAAATAAAACCAACAAC  1049
      ||||||||||||||||||| |||||||||||||||||||||| | || ||
seq2  TGTGGGCTGTGTAGAGAGA-CCTATCTCAGAAAAAAATAAAAACCAC-AC  1045

seq1  AAAAAGGTAAAATTGAAGAATGCCTACAAAATCAGGATAAGCATTGGTTG  1099
      |||||||||||  |||   ||| |||| |||||| ||| |||||    ||
seq2  AAAAAGGTAAA--TGA--GATG-CTAC-AAATCA-GAT-AGCAT---GTG  1084

seq1  AAGAGACTGGTTCAAGGGAAGGTACAAAACATATG  1134
      ||||||||||||||||     ||||||||||||||
seq2  AAGAGACTGGTTCAAG---CAGTACAAAACATATG  1116