BAC Information

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BAC

Clone NameB6Ng01-263I24
Chromosome7 (Build37)
Map Location 33,581,062 - 33,723,129
singlet/doubletdoublet
Overlap geneLOC668410, EG624439, LOC100043376, LOC100043379, LOC100043383, EG668411
Upstream geneEG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365, EG384591, LOC668398, EG384596, LOC100043370, LOC434161, EG270499, LOC100043845, LOC100043373
Downstream geneLOC100043850, LOC100043386, LOC668416, EG668526, LOC100043388, LOC270234, EG668419, EG668422, EG546954, LOC100043856, LOC100043857, EG545947, EG434676, EG668431, Abpd, EG545948, LOC435963, LOC435962, EG626970, LOC100043859, LOC627004, LOC100043398, LOC100043401, Scgb2b1, LOC668440, Abpz, LOC100043860, LOC627079, LOC635803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263I24.bB6Ng01-263I24.g
ACCGA067700GA067701
length1,180759
definitionB6Ng01-263I24.b B6Ng01-263I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,721,973 - 33,723,129)(33,581,062 - 33,581,819)
sequence
gaattcagtaattctcttatttacccatgagcttatctccctgcccaagt
tcagatctccacatcccactcagggtcaccacaacagtatggagaatatt
cacaggtatagggccttgcctcacagtcacctgcttcacagtcactgtca
cctgcctcccattcacctatcttacagtcacctacctcacagcccctgtt
acctgcctcacagttagtcacatgcctcagactcactgtcatctacctca
cagttatcttcatcacagtccctgtcacttgcctcacagtcacctgccac
acagttagtcacctgactgagactcattgtcatcaacctcacagttatct
tcatcatagtccctgtcacttgcctcacagtcacctgcctcacagttagt
caccttcctcaccattcattacctgcctcacaattagtcacctacatcat
tgccaccgaccattatgactgttctgattcatactcaacccagggccagt
gtctcttggcagccctggtcccttgccaaacatcattctaacacatatac
ttgataaaacctcatatgtcattgtgacagccatctcagtctaagagagg
agtccagtgttattaagtggaccacccccttccttaaaattagcaccact
gccatatcctatgattgtttccttccctaaaaataaccaactttctactt
ccatcctataatacatcaccaaaatatccagttggtctttatttggaaat
cttggtcctgaatttctccagacttgtgtccagactcatggccttcattc
agacttctctaggactgttcagattcaacaaagctctaaacctatttctt
aacattccttataaaaaattatgcaactgatctctccacatcagcagaca
acatttttcttctgtttagctatagacatcaaaagcctcaggtgggctgt
gtcccctctttgcctctaatcccattgggactctcccagaccaacagaaa
ggattattcctttttctctaataactgaaatcaccaatgatgatccatcc
agagtccctggacttttgggcttcactggcactgtttccaagaaagctta
ctgttaaggcttatcttctgcttctccacttccttgagaccaagtgaaat
ataatgctgattccacttctgttcacctat
gaattccttaactcgctgcagtagcccaaactcagattcttcaaatccca
tatagacaaaggctcagcctgacaaaagctggaagtttttccctcagaca
ccatgctgagtcttatgggtaatgaagttctcaaggcatgacacttcata
ggcatgaacatcagcatgttgcacaacagacacatacagatccttggtgg
ccatacttgctggtgttccaaagttctgctccttctcctgctacagtggt
gtacagagattaccattgaagggacggaaacattgcacaagaaaccttat
ttcttatatttctaaatgctatgaaaccagatgagaaaaaaaataataag
ttcacccaatgaccttggaattaatattattcccttatttctattcagat
gcatatgggctgaccttttaatatgtcagctgtggctggtactgtggctc
aatagctaaaggcacttgttccccagtgtggcaacctgagtttaaactcc
aagacctaagtggtagaagaggacgaaacctactcctacaggttgtcatt
tgttcttgactcataaacatagaaaaaagaaagaaagaaagaaagaaaga
aagaaagaaagaaagaaagacagacagacagacagacagacagacagaaa
gaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagaaaaaaaga
aaaaaagacagagaaagagaaagagaaagagggagagaggtggataggga
gggtggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_33721973_33723129
seq2: B6Ng01-263I24.b_51_1230 (reverse)

seq1  ATAGGTGAACAGAGTTGGAA-CAGCA-TATA-TTCACT--GGCTCA--GG  43
      |||||||||||||  ||||| ||||| |||| ||||||  | ||||  | 
seq2  ATAGGTGAACAGAAGTGGAATCAGCATTATATTTCACTTGGTCTCAAGGA  50

seq1  AGTGGAG-AGCAGAAGATAGGCTTAAAACAGT-AGC-TTCTGGG--ACAG  88
      ||||||| ||||||||||| || |  |||||| ||| |||| ||  ||||
seq2  AGTGGAGAAGCAGAAGATAAGCCT-TAACAGTAAGCTTTCTTGGAAACAG  99

seq1  TGCCAGTGAAGGCC-AAAGTCCAGGG-CTCTGGATGGATCATCATT-GTG  135
      ||||||||||| || ||||||||||| ||||||||||||||||||| |||
seq2  TGCCAGTGAAGCCCAAAAGTCCAGGGACTCTGGATGGATCATCATTGGTG  149

seq1  ATTTCAGGTA-TAGAG-AAAAGGAAT-ATC--TTCTGTTGGTCTGGGAGA  180
      ||||||| || ||||| ||||||||| |||  ||||||||||||||||||
seq2  ATTTCAGTTATTAGAGAAAAAGGAATAATCCTTTCTGTTGGTCTGGGAGA  199

seq1  GT-CCAATGGGATTAGAGGCAAAGAGGGGACACAGCCCACCTGAGGCTTT  229
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAATGGGATTAGAGGCAAAGAGGGGACACAGCCCACCTGAGGCTTT  249

seq1  TGATGTCTATAGCTAAACAGAAG-AAAATGTTGTCTGCTGATGTGGAGAG  278
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TGATGTCTATAGCTAAACAGAAGAAAAATGTTGTCTGCTGATGTGGAGAG  299

seq1  ATCAGTTGCATAATTTTTTATAAGGAATGTTAAGAAATAGGTTTAGAGCT  328
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTGCATAATTTTTTATAAGGAATGTTAAGAAATAGGTTTAGAGCT  349

seq1  TTGTTGAATCTGAACAGTCCTAGAGAAGTCTGAATGAAGGCCATGAGTCT  378
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGAATCTGAACAGTCCTAGAGAAGTCTGAATGAAGGCCATGAGTCT  399

seq1  GGACACAAGTCTGGAGAAATTCAGGACCAAGA-TTCCAAATAAAGACCAA  427
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GGACACAAGTCTGGAGAAATTCAGGACCAAGATTTCCAAATAAAGACCAA  449

seq1  CTGGATATTTTGGTGATGTATTATAGGATGGAAGTAG-AAGTTGGTTATT  476
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  CTGGATATTTTGGTGATGTATTATAGGATGGAAGTAGAAAGTTGGTTATT  499

seq1  TTTAGGGAAGGAAACAATCATAGGATATGGCAGTGGTGCTAATTTTAAGG  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGGAAGGAAACAATCATAGGATATGGCAGTGGTGCTAATTTTAAGG  549

seq1  AAGGGGGTGGTCCACTTAATAACACTGGACTCCTCTCTTAGACTGAGATG  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGGGTGGTCCACTTAATAACACTGGACTCCTCTCTTAGACTGAGATG  599

seq1  GCTGTCACAATGACATATGAGGTTTTATCAAGTATATGTGTTAGAATGAT  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCACAATGACATATGAGGTTTTATCAAGTATATGTGTTAGAATGAT  649

seq1  GTTTGGCAAGGGACCAGGGCTGCCAAGAGACACTGGCCCTGGGTTGAGTA  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGCAAGGGACCAGGGCTGCCAAGAGACACTGGCCCTGGGTTGAGTA  699

seq1  TGAATCAGAACAGTCATAATGGTCGGTGGCAATGATGTAGGTGACTAATT  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCAGAACAGTCATAATGGTCGGTGGCAATGATGTAGGTGACTAATT  749

seq1  GTGAGGCAGGTAATGAATGGTGAGGAAGGTGACTAACTGTGAGGCAGGTG  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGGCAGGTAATGAATGGTGAGGAAGGTGACTAACTGTGAGGCAGGTG  799

seq1  ACTGTGAGGCAAGTGACAGGGACTATGATGAAGATAACTGTGAGGTTGAT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGAGGCAAGTGACAGGGACTATGATGAAGATAACTGTGAGGTTGAT  849

seq1  GACAATGAGTCTCAGTCAGGTGACTAACTGTGTGGCAGGTGACTGTGAGG  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATGAGTCTCAGTCAGGTGACTAACTGTGTGGCAGGTGACTGTGAGG  899

seq1  CAAGTGACAGGGACTGTGATGAAGATAACTGTGAGGTAGATGACAGTGAG  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGACAGGGACTGTGATGAAGATAACTGTGAGGTAGATGACAGTGAG  949

seq1  TCTGAGGCATGTGACTAACTGTGAGGCAGGTAACAGGGGCTGTGAGGTAG  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGGCATGTGACTAACTGTGAGGCAGGTAACAGGGGCTGTGAGGTAG  999

seq1  GTGACTGTAAGATAGGTGAATGGGAGGCAGGTGACAGTGACTGTGAAGCA  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTAAGATAGGTGAATGGGAGGCAGGTGACAGTGACTGTGAAGCA  1049

seq1  GGTGACTGTGAGGCAAGGCCCTATACCTGTGAATATTCTCCATACTGTTG  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGACTGTGAGGCAAGGCCCTATACCTGTGAATATTCTCCATACTGTTG  1099

seq1  TGGTGACCCTGAGTGGGATGTGGAGATCTGAACTTGGGCAGGGAGATAAG  1126
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGACCCTGAGTGGGATGTGGAGATCTGAACTTGGGCAGGGAGATAAG  1149

seq1  CTCATGGGTAAATAAGAGAATTACTGAATTC  1157
      |||||||||||||||||||||||||||||||
seq2  CTCATGGGTAAATAAGAGAATTACTGAATTC  1180

seq1: chr7_33581062_33581819
seq2: B6Ng01-263I24.g_67_825

seq1  GAATTCCTTAACTCGCTGCAGTAGCCCAAACTCAGATTCTTCAAATCCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTAACTCGCTGCAGTAGCCCAAACTCAGATTCTTCAAATCCCA  50

seq1  TATAGACAAAGGCTCAGCCTGACAAAAGCTGGAAGTTTTTCCCTCAGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGACAAAGGCTCAGCCTGACAAAAGCTGGAAGTTTTTCCCTCAGACA  100

seq1  CCATGCTGAGTCTTATGGGTAATGAAGTTCTCAAGGCATGACACTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGCTGAGTCTTATGGGTAATGAAGTTCTCAAGGCATGACACTTCATA  150

seq1  GGCATGAACATCAGCATGTTGCACAACAGACACATACAGATCCTTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAACATCAGCATGTTGCACAACAGACACATACAGATCCTTGGTGG  200

seq1  CCATACTTGCTGGTGTTCCAAAGTTCTGCTCCTTCTCCTGCTACAGTGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACTTGCTGGTGTTCCAAAGTTCTGCTCCTTCTCCTGCTACAGTGGT  250

seq1  GTACAGAGATTACCATTGAAGGGACGGAAACATTGCACAAGAAACCTTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGATTACCATTGAAGGGACGGAAACATTGCACAAGAAACCTTAT  300

seq1  TTCTTATATTTCTAAATGCTATGAAACCAGATGAGAAAAAAAATAATAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTATATTTCTAAATGCTATGAAACCAGATGAGAAAAAAAATAATAAG  350

seq1  TTCACCCAATGACCTTGGAATTAATATTATTCCCTTATTTCTATTCAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCAATGACCTTGGAATTAATATTATTCCCTTATTTCTATTCAGAT  400

seq1  GCATATGGGCTGACCTTTTAATATGTCAGCTGTGGCTGGTACTGTGGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGGGCTGACCTTTTAATATGTCAGCTGTGGCTGGTACTGTGGCTC  450

seq1  AATAGCTAAAGGCACTTGTTCCCCAGTGTGGCAACCTGAGTTTAAACTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGCTAAAGGCACTTGTTCCCCAGTGTGGCAACCTGAGTTTAAACTCC  500

seq1  AAGACCTAAGTGGTAGAAGAGGACGAAACCTACTCCTACAGGTTGTCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTAAGTGGTAGAAGAGGACGAAACCTACTCCTACAGGTTGTCATT  550

seq1  TGTTCTTGACTCATAAACATAGAAAAAAGAAAGAAAGAAAGAAAGAAAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTTGACTCATAAACATAGAAAAAAGAAAGAAAGAAAGAAAGAAAGA  600

seq1  AAGAAAGAAAGAAAGAAAGACAGACAGACAGACAGACAGACAGACAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGACAGACAGACAGACAGACAGACAGACAGAAA  650

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAAAAGA  700

seq1  AAAAAAGACAGAGAAAGAGAAAGAGAAAGAGGGAGAGAGGTGGATAGGGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGACAGAGAAAGAGAAAGAGAAAGAGGGAGAGAGGTGGATAGGGA  750

seq1  -GGTGGAGG  758
       ||||||||
seq2  GGGTGGAGG  759