BAC Information

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BAC

Clone NameB6Ng01-264E06
Chromosome7 (Build37)
Map Location 120,218,102 - 120,345,523
singlet/doubletdoublet
Overlap genenone
Upstream geneUsp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
Downstream geneArntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2, EG434228, Spon1, Rras2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264E06.bB6Ng01-264E06.g
ACCGA068214GA068215
length1,130937
definitionB6Ng01-264E06.b B6Ng01-264E06.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,344,389 - 120,345,523)(120,218,102 - 120,219,024)
sequence
gaattcactatgtagatgagactagccttgaactcacagaagcctggctc
tgcctcccaagtgtttggatttaaaagtatatgctaccatgcccagccat
aaacgtgagtttttatgcagcaggcactcacaggttaacagatcttggca
gctctctcagaggcttcccgggagaccttccctggctcctttctgaatgg
aatgacccagcagctcagaactggagagcagcaatacctcatttggaatg
tgtcctacactgtgtaatggggctgaagatcagatctttcttgaagacag
ggccaagattctcaggctctcagtgctgcaatgtgagaaggggcgctgct
atgcctggaaggaggtgaagtcccctcagccacctcacttcacaggagct
ccacacaacagacactgtctagaacaagagcgaactttctgtcctgcttt
gctagaatacacagcactgaactgctctctctacaacagggaagaaagaa
agaaagaaagaaagaaagaaagaaagaaagaaagaaagaaagactaccag
cacagcaaagcaaggtgtttagccatgtatgaactgtatgtagtaactga
agaacataaaattatgtttaaaaaaaaaaaaaaggttgcaagtatctgac
ctggcacactctcaaaacaaaatatataggagtggtaattagccaggtct
gatgtcacaggcctggaacccaagttatttagaagtctggtgcacttaca
tggaaggtttaaggccagcctaggatgcagagtgagttcaaggctagcct
gggcaacactctcaaaatagaaagtaaaaggaggcttgaagctatagact
tatggtagaatgcttacttagcaggcaggatgccctaggttcaatcccga
ggaccacccaaataatacaataacagaagtgatttaaatgggccttatat
tagcataaagacagaccagaagatggatccagaaatagacccaaagtaca
taaaatttgaatacatagtaaagtttaaatgacttttaaaaaagaagatg
gtttcaatataatgctaatgaacactatgaaaccatgaaaacttcttcta
ccttatctctgtactaatgtaactccacag
gaattccgtgttgccgcttctattgaaaggagttttttttttttttaatg
ctccattaaatgaagatagtgtggttgtgaaagcaaattaggcctagcac
tcagccacgctaccacacgtgtcagacctagatagggcagcttcgagatt
tcatgtggccccttgctgtattaaatggatggagggtctgcagcctatgc
caaacctgctgtagctaagatgtctgcctgtctgcattcaaaaagtccca
catgaaccccaacccaaggtcccctctgttagaggatgatacttgcttga
tcacccattgtttccaaaatctggggattgctgcagacagcagacggcat
caggcttaaccactggtcacgtctctccaggtggtctaatgccaaggtag
gcttccctacgggggaagtttgaatattaaatgccccctatactcatggg
gcattagttagttgggtttttgtttgtttgtttgttttgttttgttttgt
tttgttttgttttgttttgacactctagggcaaaggcaactatcaacagg
aagggttcatcttgggcttatagctccagaggagtaagaatccctcaccg
ctgactgtggaggaagggggaggtctcatcactcaggcttggtgatgaga
acaaacccaaagctcacatctcagaccacaagcaggaatggaatgatctg
gagctgatggggagatgttttgcaatgtctaatccccagcgatacacttt
gctcccaaccaggcccatactgtcctgagccttccgaaacaatcttcctt
gaccagggaccacacacttcaacgtcaaaacacattagagatggtctcgt
tcaacccactggacatgttcttgagctctggtcccggcttggtggtaact
ggtttttgaaagtttattgattcccttagaaaggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120344389_120345523
seq2: B6Ng01-264E06.b_43_1172 (reverse)

seq1  CTGT-GAGTTACATTTTAGTACAGAGATAAGGGTAGGAAGAAGTTTTCAT  49
      |||| ||||||||  ||||||||||||||| |||| ||||||||||||||
seq2  CTGTGGAGTTACA--TTAGTACAGAGATAA-GGTA-GAAGAAGTTTTCAT  46

seq1  GGGTTTCCATAGTTGTTTCAATAGCA-TATATTGAAAACCCATCT--CTT  96
      ||  || ||||||   |||| ||||| ||||||||||  ||||||   ||
seq2  GG--TTTCATAGT--GTTCATTAGCATTATATTGAAA--CCATCTTCTTT  90

seq1  TTTAAAAGTCATTTAAACTTTACTATGTATTCAATTTTTATGTACTTTGG  146
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTTAAAAGTCATTTAAACTTTACTATGTATTCAAATTTTATGTACTTTGG  140

seq1  GTCTATTTCTGGATCCATCTTCTGGTCTGTCTTTATGCTAATATAAGG-C  195
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GTCTATTTCTGGATCCATCTTCTGGTCTGTCTTTATGCTAATATAAGGCC  190

seq1  CATTTAAATCACTTCTGTTTATTGTATTATTT-GGTGGTCCTCGGGATTG  244
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  CATTTAAATCACTTCTG-TTATTGTATTATTTGGGTGGTCCTCGGGATTG  239

seq1  AACCTAGGGCATCCTGCCTGCTAAGTAAGCATTCTACCATAAGTCTATAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGGGCATCCTGCCTGCTAAGTAAGCATTCTACCATAAGTCTATAG  289

seq1  CTTCAAGCCTCCTTTTACTTTCTATTTTGAGAGTGTTGCCCAGGCTAGCC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGCCTCCTTTTACTTTCTATTTTGAGAGTGTTGCCCAGGCTAGCC  339

seq1  TTGAACTCACTCTGCATCCTAGGCTGGCCTTAAACCTTCCATGTAAGTGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCACTCTGCATCCTAGGCTGGCCTTAAACCTTCCATGTAAGTGC  389

seq1  ACCAGACTTCTAAATAACTTGGGTTCCAGGCCTGTGACATCAGACCTGGC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGACTTCTAAATAACTTGGGTTCCAGGCCTGTGACATCAGACCTGGC  439

seq1  TAATTACCACTCCTATATATTTTGTTTTGAGAGTGTGCCAGGTCAGATAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTACCACTCCTATATATTTTGTTTTGAGAGTGTGCCAGGTCAGATAC  489

seq1  TTGCAACCTTTTTTTTTTTTTTAAACATAATTTTATGTTCTTCAGTTACT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAACCTTTTTTTTTTTTTTAAACATAATTTTATGTTCTTCAGTTACT  539

seq1  ACATACAGTTCATACATGGCTAAACACCTTGCTTTGCTGTGCTGGTAGTC  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATACAGTTCATACATGGCTAAACACCTTGCTTTGCTGTGCTGGTAGTC  589

seq1  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTT  639

seq1  CCCTGTTGTAGAGAGAGCAGTTCAGTGCTGTGTATTCTAGCAAAGCAGGA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTTGTAGAGAGAGCAGTTCAGTGCTGTGTATTCTAGCAAAGCAGGA  689

seq1  CAGAAAGTTCGCTCTTGTTCTAGACAGTGTCTGTTGTGTGGAGCTCCTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGTTCGCTCTTGTTCTAGACAGTGTCTGTTGTGTGGAGCTCCTGT  739

seq1  GAAGTGAGGTGGCTGAGGGGACTTCACCTCCTTCCAGGCATAGCAGCGCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAGGTGGCTGAGGGGACTTCACCTCCTTCCAGGCATAGCAGCGCC  789

seq1  CCTTCTCACATTGCAGCACTGAGAGCCTGAGAATCTTGGCCCTGTCTTCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTCACATTGCAGCACTGAGAGCCTGAGAATCTTGGCCCTGTCTTCA  839

seq1  AGAAAGATCTGATCTTCAGCCCCATTACACAGTGTAGGACACATTCCAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGATCTGATCTTCAGCCCCATTACACAGTGTAGGACACATTCCAAA  889

seq1  TGAGGTATTGCTGCTCTCCAGTTCTGAGCTGCTGGGTCATTCCATTCAGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTATTGCTGCTCTCCAGTTCTGAGCTGCTGGGTCATTCCATTCAGA  939

seq1  AAGGAGCCAGGGAAGGTCTCCCGGGAAGCCTCTGAGAGAGCTGCCAAGAT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGCCAGGGAAGGTCTCCCGGGAAGCCTCTGAGAGAGCTGCCAAGAT  989

seq1  CTGTTAACCTGTGAGTGCCTGCTGCATAAAAACTCACGTTTATGGCTGGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAACCTGTGAGTGCCTGCTGCATAAAAACTCACGTTTATGGCTGGG  1039

seq1  CATGGTAGCATATACTTTTAAATCCAAACACTTGGGAGGCAGAGCCAGGC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTAGCATATACTTTTAAATCCAAACACTTGGGAGGCAGAGCCAGGC  1089

seq1  TTCTGTGAGTTCAAGGCTAGTCTCATCTACATAGTGAATTC  1135
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTGAGTTCAAGGCTAGTCTCATCTACATAGTGAATTC  1130

seq1: chr7_120218102_120219024
seq2: B6Ng01-264E06.g_65_1001

seq1  GAATTCCGTGTTG-TGCTTCTATTGAAAGGAGTTTTTTTTTTTTTTAATG  49
      |||||||||||||  |||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTGTTGCCGCTTCTATTGAAAGGAGTTTTTTTTTTTTTTAATG  50

seq1  CTCCATTAAATGAAGATAGTGTGGTTGTGAAAGCAAATTAGGCCTAGCAC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTAAATGAAGATAGTGTGGTTGTGAAAGCAAATTAGGCCTAGCAC  100

seq1  TCAGCCACGCTACCACACGTGTCAGACCTAGATAGGGCAGCTTCGAGATT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCACGCTACCACACGTGTCAGACCTAGATAGGGCAGCTTCGAGATT  150

seq1  TCATGTGGCCCCTTGCTGTATTAAATGGATGGAGGGTCTGCAGCCTATGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGCCCCTTGCTGTATTAAATGGATGGAGGGTCTGCAGCCTATGC  200

seq1  CAAACCTGCTGTAGCTAAGATGTCTGCCTGTCTGCATTCAAAAAGTCCCA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTGCTGTAGCTAAGATGTCTGCCTGTCTGCATTCAAAAAGTCCCA  250

seq1  CATGAACCCCAACCCAAGGTCCCCTCTGTTAGAGGATGATACTTGCTTGA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAACCCCAACCCAAGGTCCCCTCTGTTAGAGGATGATACTTGCTTGA  300

seq1  TCACCCATTGTTTCCAAAATCTGGGGATTGCTGCAGACAGCAGACGGCAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCATTGTTTCCAAAATCTGGGGATTGCTGCAGACAGCAGACGGCAT  350

seq1  CAGGCTTAACCACTGGTCACGTCTCTCCAGGTGGTCTAATGCCAAGGTAG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTAACCACTGGTCACGTCTCTCCAGGTGGTCTAATGCCAAGGTAG  400

seq1  GCTTCCCTACGGGGGAAGTTTGAATATTAAATGCCCCCTATACTCATGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCCCTACGGGGGAAGTTTGAATATTAAATGCCCCCTATACTCATGGG  450

seq1  GCATTAGTTAGTTGGGTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAGTTAGTTGGGTTTTTGTTTGTTTGTTTGTTTTGTTTTGTTTTGT  500

seq1  TTTGTTTTGTTTTGTTTTGACACTCTAGGGCAAAGGCAACTATCAACAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTGTTTTGTTTTGACACTCTAGGGCAAAGGCAACTATCAACAGG  550

seq1  AAGGGTTCATCTTGGGCTTATAGCTCCAGAGGAGTAAGAATCCCTCACCG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTCATCTTGGGCTTATAGCTCCAGAGGAGTAAGAATCCCTCACCG  600

seq1  CTGACTGTGGAGGAAGGGGGAGGTCTCATCACTCAGGCTTGGTGATGAGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTGTGGAGGAAGGGGGAGGTCTCATCACTCAGGCTTGGTGATGAGA  650

seq1  AC-AACCCAAAGCTCACATCTCAGACCACAAGCAGGAATGGAATGATCTG  698
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACCCAAAGCTCACATCTCAGACCACAAGCAGGAATGGAATGATCTG  700

seq1  GAGCTGAT-GGGAGATG-TTTGCAATGTCAAATCCCCAGCGATACAC-TT  745
      |||||||| |||||||| ||||||||||| ||||||||||||||||| ||
seq2  GAGCTGATGGGGAGATGTTTTGCAATGTCTAATCCCCAGCGATACACTTT  750

seq1  GCT-CCAACCAGG-CCATACTG-CCTGAGCCTTCCGAAACAATC-TCACT  791
      ||| ||||||||| |||||||| ||||||||||||||||||||| ||  |
seq2  GCTCCCAACCAGGCCCATACTGTCCTGAGCCTTCCGAAACAATCTTCCTT  800

seq1  GACCAGGGACCACACACTCAAACGTCAAAACACATAAGAGAT-GTCTCGT  840
      ||||||||||||||||||  ||||||||||||||| |||||| |||||||
seq2  GACCAGGGACCACACACTTCAACGTCAAAACACATTAGAGATGGTCTCGT  850

seq1  TCAACCCACTGCACATGTGCTTGAGCTCTGGTCCCGGC-TGGTGGTAACT  889
      ||||||||||| |||||| ||||||||||||||||||| |||||||||||
seq2  TCAACCCACTGGACATGTTCTTGAGCTCTGGTCCCGGCTTGGTGGTAACT  900

seq1  -GTTTTGGAAAG-TTATTGA-ACCCTTAGGAAGGAGA  923
       ||||| ||||| |||||||  ||||||| |||||||
seq2  GGTTTTTGAAAGTTTATTGATTCCCTTAGAAAGGAGA  937