BAC Information

Click to search

BAC

Clone NameB6Ng01-265F12
Chromosome7 (Build37)
Map Location 54,943,161 - 55,012,510
singlet/doubletdoublet
Overlap geneMrgprc3-ps, EG435977
Upstream geneSaal1, Saa3, Saa4, LOC100040106, Saa1, Saa2, Hps5, Gtf2h1, EG668838, EG384622, Ldha, Ldhc, Tsg101, Uevld, C86187, LOC384623, ENSMUSG00000056509, Spty2d1, LOC100040174, Tmem86a, Ptpn5, LOC100041710, Mrgpra6, EG668725, Gm660, Mrgpra1, LOC668846, LOC100040217, LOC668727, Mrgpra2, LOC638950, Mrgprc4-ps, LOC677457, EG668729, Mrgpra3, Mrgprc1-ps, LOC100040314
Downstream geneEG619792, Mrgprc7-ps, Mrgpra18-ps, EG435978, Mrgprc2-ps, Mrgpra4, Mrgprx1, Mrgprb7-ps, Mrgprb12-ps, EG270335, Mrgprb5, Mrgprb4, Mrgprb13, Mrgprb8, Mrgprb1, Mrgprx2, Mrgprb2, Mrgprb9-ps, Mrgprb3, EG639116
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265F12.bB6Ng01-265F12.g
ACCGA069020GA069021
length1,1471,057
definitionB6Ng01-265F12.b B6Ng01-265F12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(55,011,362 - 55,012,510)(54,943,161 - 54,944,196)
sequence
gaattctagtgatatttgcctttggtataatgacaagctggcttaaattc
tggctattaaaactatgccttttacccttgagaactagtaagtggttact
tagttctctccctgatccatgcagattttagagatctcactttctagttc
agacgctaggatacataaaaaatttcaatatgctttgttttagtggaagg
caagtgaatgtttattatatagtcatctatgtttcaacaattgtgataca
tgcagggttggcgtccttatagttgatttcctcagcatataaacatgcaa
aattatatttacacaatctgagacaatgtagactatgtagcaggctatat
gttgcctatttagcatagcctattattcattgggacataatgaacaaagc
aagattttatcaatcataagagaaaatgatacaatcagaaaactttctaa
acaatgcatttgggtactatctgtgtgcaaacatacaagttcacactaaa
atttttatttttatacatttcctaaaataaaataaaaggccagtgtagta
aatataaatataatatatgatagtaatatagtcattttatacttttaatc
ctaggatgcatagtgctttcatattaatggaagtaaagtgtcttttttta
caagtgtgacaagacaaacacactgaaggtgacaacggctatgatatcat
tctacaataaggagtttccagcaccagaataattttaagaaattactgtc
atacatgaaagctgtcacagaatgaagaataagatgaatacatgaatgaa
ttgccttcttgcttctgtgcccgcctcacaaacaactcctaagcatatcc
gagctccaatcttggagtcagtctgtacaataaattaacattttcacatt
gttttatttctatttcattactaactaatgacaagttgctgtttgtaagt
gtaaaggattgtctctgtacatatcatccaacctaacccaagaaagagat
gttgcaatgaattgttttatcagactgggaactaaatttggcacagttta
ctattgctactcagatttctgcacaagtgactggtgcgaaggatctactc
agatttctgtacaattgccttctgtatgtgaaattggccttcatggg
gaattcaaagcaacaccatgaggattctactttttcctaagtcggtagct
gggacttttgttggggatgtgccatctgaggatttgagatggatagtggg
atatattgaagtcagttacaccagagagaatggatgaaggaagcttcact
atgtcactgattccctaaggcccaaactaaggctgctgttgcagcaagtg
aaaccaaaatctttccattttggggccaatctctgcggcatccaggttgg
ggttagagagtcagtatgaaaatgctggataatggatgaggtttttcagc
tctgtctagtgttggatctcagtaaattgggtctgatattctgtaaggat
aagtcaccggttcactttcctgccttttctcccagtggttagagtcttct
gtcatggtgaggtgaggtagagataggagagatagccagtagcccttggc
ttctgtagttctagaggctcagtctgggccacttgcttaggagaagggaa
tttgaagttctgactggcactagttgtcatagtgaaacacccgatacaag
aatttaactctaagttctggactcaatttactttactttcttgatttagc
agggatttctctctactaatttggggagaggtgatacaggaaaatttccc
tttctgcttctagggtgtcttaagaaatactcaaaccaggtattctagtt
tggtgcatagttctctcatttctcttgaagatgttgtggtgaatgaatag
gcctaccacaatgaggaaagatgggggaagatagcgaattatctgggact
tcctgcctttctgctgataagctgtaatgttgtcaggagtaatgagtcct
atgaggggaaggaggaataacaccacactgtagaccaagacaaggaaaaa
cccacatacactttagatttacagaagaacatagagccttaacatagaat
gataaaacaaaggcataggaggtagggcacaatttcccctgaacccagta
agctgcaggagaagagagggggggcagaataggagagtagagagtagtga
gagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_55011362_55012510
seq2: B6Ng01-265F12.b_46_1192 (reverse)

seq1  CCCATGAAAGCCATTTCCACATACAGAAGCAAATTTGTACAGAAATCTGA  50
      |||||||| |||| || ||||||||||||  || ||||||||||||||||
seq2  CCCATGAAGGCCAATTTCACATACAGAAGGCAA-TTGTACAGAAATCTGA  49

seq1  GTAGATCTGTCGCACCAGTCACCTTGTGCAGAAATCTGAGTAGCAATAGT  100
      |||||||  |||||||||||| ||||||||||||||||||||||||||||
seq2  GTAGATCCTTCGCACCAGTCA-CTTGTGCAGAAATCTGAGTAGCAATAGT  98

seq1  -AACTGTGCCAAATTTAGTTTTCCAGTTCTGATAAAAC-ATTCATTGCAA  148
       ||||||||||||||||| || |||| ||||||||||| |||||||||||
seq2  AAACTGTGCCAAATTTAG-TTCCCAG-TCTGATAAAACAATTCATTGCAA  146

seq1  CATCTCTTTCTTGGTTTAGGTTGGATGATATGTACAGAGACAATCC-TTA  197
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  CATCTCTTTCTTGGGTTAGGTTGGATGATATGTACAGAGACAATCCTTTA  196

seq1  CACTTTACAAACAGCAACTTGTCATTAGTTAGTAATGAAATAGAAATAAA  247
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAC-TTACAAACAGCAACTTGTCATTAGTTAGTAATGAAATAGAAATAAA  245

seq1  ACAATGTGAAAATGTTAATTTATTGTACAGACTGACTCCAAGATTGGAGC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATGTGAAAATGTTAATTTATTGTACAGACTGACTCCAAGATTGGAGC  295

seq1  TCGGATATGCTTAGGAGTTGTTTGTGAGGCGGGCACAGAAGCAAGAAGGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGATATGCTTAGGAGTTGTTTGTGAGGCGGGCACAGAAGCAAGAAGGC  345

seq1  AATTCATTCATGTATTCATCTTATTCTTCATTCTGTGACAGCTTTCATGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATTCATGTATTCATCTTATTCTTCATTCTGTGACAGCTTTCATGT  395

seq1  ATGACAGTAATTTCTTAAAATTATTCTGGTGCTGGAAACTCCTTATTGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTAATTTCTTAAAATTATTCTGGTGCTGGAAACTCCTTATTGTA  445

seq1  GAATGATATCATAGCCGTTGTCACCTTCAGTGTGTTTGTCTTGTCACACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGATATCATAGCCGTTGTCACCTTCAGTGTGTTTGTCTTGTCACACT  495

seq1  TGTAAAAAAAGACACTTTACTTCCATTAATATGAAAGCACTATGCATCCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAAAAGACACTTTACTTCCATTAATATGAAAGCACTATGCATCCT  545

seq1  AGGATTAAAAGTATAAAATGACTATATTACTATCATATATTATATTTATA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATTAAAAGTATAAAATGACTATATTACTATCATATATTATATTTATA  595

seq1  TTTACTACACTGGCCTTTTATTTTATTTTAGGAAATGTATAAAAATAAAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTACACTGGCCTTTTATTTTATTTTAGGAAATGTATAAAAATAAAA  645

seq1  ATTTTAGTGTGAACTTGTATGTTTGCACACAGATAGTACCCAAATGCATT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAGTGTGAACTTGTATGTTTGCACACAGATAGTACCCAAATGCATT  695

seq1  GTTTAGAAAGTTTTCTGATTGTATCATTTTCTCTTATGATTGATAAAATC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAAAGTTTTCTGATTGTATCATTTTCTCTTATGATTGATAAAATC  745

seq1  TTGCTTTGTTCATTATGTCCCAATGAATAATAGGCTATGCTAAATAGGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTTTGTTCATTATGTCCCAATGAATAATAGGCTATGCTAAATAGGCA  795

seq1  ACATATAGCCTGCTACATAGTCTACATTGTCTCAGATTGTGTAAATATAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATAGCCTGCTACATAGTCTACATTGTCTCAGATTGTGTAAATATAA  845

seq1  TTTTGCATGTTTATATGCTGAGGAAATCAACTATAAGGACGCCAACCCTG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCATGTTTATATGCTGAGGAAATCAACTATAAGGACGCCAACCCTG  895

seq1  CATGTATCACAATTGTTGAAACATAGATGACTATATAATAAACATTCACT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTATCACAATTGTTGAAACATAGATGACTATATAATAAACATTCACT  945

seq1  TGCCTTCCACTAAAACAAAGCATATTGAAATTTTTTATGTATCCTAGCGT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTCCACTAAAACAAAGCATATTGAAATTTTTTATGTATCCTAGCGT  995

seq1  CTGAACTAGAAAGTGAGATCTCTAAAATCTGCATGGATCAGGGAGAGAAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAACTAGAAAGTGAGATCTCTAAAATCTGCATGGATCAGGGAGAGAAC  1045

seq1  TAAGTAACCACTTACTAGTTCTCAAGGGTAAAAGGCATAGTTTTAATAGC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAACCACTTACTAGTTCTCAAGGGTAAAAGGCATAGTTTTAATAGC  1095

seq1  CAGAATTTAAGCCAGCTTGTCATTATACCAAAGGCAAATATCACTAGAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATTTAAGCCAGCTTGTCATTATACCAAAGGCAAATATCACTAGAAT  1145

seq1  TC  1149
      ||
seq2  TC  1147

seq1: chr7_54943161_54944196
seq2: B6Ng01-265F12.g_67_1123

seq1  GAATTCAAAGCAACACCATGAGGATTCTACTTTTTCCTAAGTCGGTAGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGCAACACCATGAGGATTCTACTTTTTCCTAAGTCGGTAGCT  50

seq1  GGGACTTTTGTTGGGGATGTGCCATCTGAGGATTTGAGATGGATAGTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTTTGTTGGGGATGTGCCATCTGAGGATTTGAGATGGATAGTGGG  100

seq1  ATATATTGAAGTCAGTTACACCAGAGAGAATGGATGAAGGAAGCTTCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTGAAGTCAGTTACACCAGAGAGAATGGATGAAGGAAGCTTCACT  150

seq1  ATGTCACTGATTCCCTAAGGCCCAAACTAAGGCTGCTGTTGCAGCAAGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCACTGATTCCCTAAGGCCCAAACTAAGGCTGCTGTTGCAGCAAGTG  200

seq1  AAACCAAAATCTTTCCATTTTGGGGCCAATCTCTGCGGCATCCAGGTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAATCTTTCCATTTTGGGGCCAATCTCTGCGGCATCCAGGTTGG  250

seq1  GGTTAGAGAGTCAGTATGAAAATGCTGGATAATGGATGAGGTTTTTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGAGAGTCAGTATGAAAATGCTGGATAATGGATGAGGTTTTTCAGC  300

seq1  TCTGTCTAGTGTTGGATCTCAGTAAATTGGGTCTGATATTCTGTAAGGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTAGTGTTGGATCTCAGTAAATTGGGTCTGATATTCTGTAAGGAT  350

seq1  AAGTCACCGGTTCACTTTCCTGCCTTTTCTCCCAGTGGTTAGAGTCTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACCGGTTCACTTTCCTGCCTTTTCTCCCAGTGGTTAGAGTCTTCT  400

seq1  GTCATGGTGAGGTGAGGTAGAGATAGGAGAGATAGCCAGTAGCCCTTGGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATGGTGAGGTGAGGTAGAGATAGGAGAGATAGCCAGTAGCCCTTGGC  450

seq1  TTCTGTAGTTCTAGAGGCTCAGTCTGGGCCACTTGCTTAGGAGAAGGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGTTCTAGAGGCTCAGTCTGGGCCACTTGCTTAGGAGAAGGGAA  500

seq1  TTTGAAGTTCTGACTGGCACTAGTTGTCATAGTGAAACACCCGATACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAGTTCTGACTGGCACTAGTTGTCATAGTGAAACACCCGATACAAG  550

seq1  AATTTAACTCTAAGTTCTGGACTCAATTTACTTTACTTTCTTGATTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAACTCTAAGTTCTGGACTCAATTTACTTTACTTTCTTGATTTAGC  600

seq1  AGGGATTTCTCTCTACTAATTTGGGGAGAGGTGATACAGGAAAATTTCCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATTTCTCTCTACTAATTTGGGGAGAGGTGATACAGGAAAATTTCCC  650

seq1  TTTCTGCTTCTAGGGTGTCTTAAGAAATACTCAAACCAGGTATTCTAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTCTAGGGTGTCTTAAGAAATACTCAAACCAGGTATTCTAGTT  700

seq1  TGGTGCATAGTTCTCTCATTTCTCTTGAAGATGTTGTGGTGAATGAATAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGCATAGTTCTCTCATTTCTCTTGAAGATGTTGTGGTGAATGAATAG  750

seq1  GCCTACCACAATGAGGAAAGATGGGGGAAGATAGCGAATTATCTGGGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTACCACAATGAGGAAAGATGGGGGAAGATAGCGAATTATCTGGGACT  800

seq1  TCCTGCCTTTCTGCTGATAAGCTGTAATGTTGTCAGGAGTAATGAGTCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCCTTTCTGCTGATAAGCTGTAATGTTGTCAGGAGTAATGAGTCCT  850

seq1  ATGAGGGGAAGGAGGAATAACACCACACTGTAGACCAAGACAAGGAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGGGAAGGAGGAATAACACCACACTGTAGACCAAGACAAGGAAAAA  900

seq1  CCCACATACACTTTAGATTTACAGAAGAAACAATAGAGCC-TAACATAGA  949
      |||||||||||||||||||||||||||||   |||||||| |||||||||
seq2  CCCACATACACTTTAGATTTACAGAAGAA--CATAGAGCCTTAACATAGA  948

seq1  ATGAT-AAACAAAGGCATAGGAGGTAGGGCACAA-TTCCCCTGACCCAAG  997
      ||||| |||||||||||||||||||||||||||| ||||||||| || ||
seq2  ATGATAAAACAAAGGCATAGGAGGTAGGGCACAATTTCCCCTGAACCCAG  998

seq1  TAAGGCTGCAAGAG-AGAGAGGGGGGGCAGA----GAGAG-AGAG-----  1036
      ||| |||||| ||| ||||||||||||||||    ||||| ||||     
seq2  TAA-GCTGCAGGAGAAGAGAGGGGGGGCAGAATAGGAGAGTAGAGAGTAG  1047

seq1  ----------  1036
                
seq2  TGAGAGAGAG  1057