BAC Information

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BAC

Clone NameB6Ng01-265J23
Chromosome7 (Build37)
Map Location 111,212,677 - 111,382,281
singlet/doubletdoublet
Overlap geneOlfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497
Upstream geneOlfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643
Downstream geneEG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265J23.bB6Ng01-265J23.g
ACCGA069222GA069223
length1,1201,139
definitionB6Ng01-265J23.b B6Ng01-265J23.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,212,677 - 111,213,799)(111,381,116 - 111,382,281)
sequence
gaattctatcagaccttcaaagaagacctaataccaatactcttcaaact
attccacaaaatagaaacagaaggaacagtacccagtttgatctttgaag
ccacagttatgatgataccaaaaccacacaaagacccaacaaagagagat
ttcttaaacccaacaccaatggagctaagaatggctctctgtcctgtttc
tgtgtctctctctttgtctctctgtctctcactctcttcaacctactctc
ttctttcacttgatgagtgtgtgtgcatatagatgtgtgtatgtatgtac
cgatatacatggtaaacgtagtattttatatttttacctttattcatggc
atttttcacaagaatttttgctcataaagtggtttatgtatggttcaaca
agattatattttgcatagctttctaaccttctatgtcatttacaaaaata
taaaccatgacacaaaccatttgtttttcaatatttgtagaaaagtaatt
aaaataaacctgtaataaagtattttaaatgtaagttgtgttgtaactgg
caacttttgacttctttctgaattgccaattaactcttagtaagtctaca
ttttattattttcctaccactatcaatttaactagcagttctttaattca
taagaactcataaagtaccatgctataatattggcctgcaaaatgggata
tgtgcccagtgatgcaaatgactgtgtagtaacaatgattatggagtaac
aaagtgctgagatctgctccaaaagaggggatttcatgattgatactata
gtcctgatcaaaggctcaagttagggatgttatagtccctaaaataaaac
ctcttgttattattttgctctattctcttcaagtttaattgtcttctaat
tttgtctctatgcacatagacttaggctgctgtcaaataagtcagaaacc
tatttacatcatcagcattcacagagagcactggaggtcaaatgctaaga
aggaaaaactggagtactaagccttaaaagcacattttttattagcacac
aagcaacaggacttcagcaggcatccatggaaagaagatggagtggttag
agcaaaggaccagggaggag
gaattcaatatttattaaaaaattcctatctaattcagaggttctttaca
tttgaccacagacattagtaaagaaaaaagtcgtcaaatgtgctcagtca
ggcgctgtgaggtagagctataatcagtatttgagagctcagtcaggcgc
tgtgaggtagatctataatcagtatttgggagctcagtcaggcactgtga
ggtagatctataatcagtatttgggagctcagtcaggtgctgtgaggtag
agctataatcagtatttgggagctcagtcaggcactgtgaggtagatcta
taatcagtatttgggagtgaggcaaatggactgagtctgtggccagtttg
ggctatttatggagaccctatctcaaacaacactaaaacaaattcacagc
caggtatggtgatgtccacttgtaatcgggactctggatcagttctcagt
tagtttctcaatcacagagttcaaggccagcctgtttcaaaaatacaaac
aaacaaaaaacaaacaaacaaacaaaaaacccaaaaccaaaacacaacta
gactggtgtcccagcactcaggagaggcaagcggatctctccaagtttaa
ggccagtttgacctacagagttccagaaaccctatctctaaaaataaaaa
acaaaaaacaaaaataaacaacccaaaagcaaaaatacaaaaaccccaaa
acactaaatgcttttccatgagatggcttaagggtgcgcactcttagcaa
tggaaggtatcctactaggagaacagagaatggagattcatgtgtttgaa
ggaatctgcttagttgtgggcaggggtaacagacctcaggaagttggccg
ccgcagggtcatcgggactatacagctgcagggattaaaatagggacaaa
gggcagaagaaagtaatacttcgagaagtgtagatgggcagtcgtgtttg
gtgacattataaaggagacgtgccagcctcacagtctaagaaaatcctta
tgcgtcgaggtggcacggtcatggaggaggagcaagacgggagatctcat
agctctgttactctgctaactcagcatcacccagatccaactgtgctgat
ctggaatagctgcttgctgatactggctggaagaagaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111212677_111213799
seq2: B6Ng01-265J23.b_45_1164

seq1  GAATTCTATCAGACCTTCAAAGAAGACCTAATACCAATACTCTTCAAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATCAGACCTTCAAAGAAGACCTAATACCAATACTCTTCAAACT  50

seq1  ATTCCACAAAATAGAAACAGAAGGAACAGTACCCAGTTTGATCTTTGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCACAAAATAGAAACAGAAGGAACAGTACCCAGTTTGATCTTTGAAG  100

seq1  CCACAGTTATGATGATACCAAAACCACACAAAGACCCAACAAAGAGAGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTTATGATGATACCAAAACCACACAAAGACCCAACAAAGAGAGAT  150

seq1  TTCTTAAACCCAACACCAATGGAGCTAAGAATGGCTCTCTGTCCTGTTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAACCCAACACCAATGGAGCTAAGAATGGCTCTCTGTCCTGTTTC  200

seq1  TGTGTCTCTCTCTTTGTCTCTCTGTCTCTCACTCTCTTCAACCTACTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCTCTCTCTTTGTCTCTCTGTCTCTCACTCTCTTCAACCTACTCTC  250

seq1  TTCTTTCACTTGATGAGTGTGTGTGCATATAGATGTGTGTATGTATGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCACTTGATGAGTGTGTGTGCATATAGATGTGTGTATGTATGTAC  300

seq1  CGATATACATGGTAAACGTAGTATTTTATATTTTTACCTTTATTCATGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGATATACATGGTAAACGTAGTATTTTATATTTTTACCTTTATTCATGGC  350

seq1  ATTTTTCACAAGAATTTTTGCTCATAAAGTGGTTTATGTATGGTTCAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCACAAGAATTTTTGCTCATAAAGTGGTTTATGTATGGTTCAACA  400

seq1  AGATTATATTTTGCATAGCTTTCTAACCTTCTATGTCATTTACAAAAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATATTTTGCATAGCTTTCTAACCTTCTATGTCATTTACAAAAATA  450

seq1  TAAACCATGACACAAACCATTTGTTTTTCAATATTTGTAGAAAAGTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCATGACACAAACCATTTGTTTTTCAATATTTGTAGAAAAGTAATT  500

seq1  AAAATAAACCTGTAATAAAGTATTTTAAATGTAAGTTGTGTTGTAACTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAACCTGTAATAAAGTATTTTAAATGTAAGTTGTGTTGTAACTGG  550

seq1  CAACTTTTGACTTCTTTCTGAATTGCCAATTAACTCTTAGTAAGTCTACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTTTGACTTCTTTCTGAATTGCCAATTAACTCTTAGTAAGTCTACA  600

seq1  TTTTATTATTTTCCTACCACTATCAATTTAACTAGCAGTTCTTTAATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTATTTTCCTACCACTATCAATTTAACTAGCAGTTCTTTAATTCA  650

seq1  TAAGAACTCATAAAGTACCATGCTATAATATTGGCCTGCAAAATGGGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAACTCATAAAGTACCATGCTATAATATTGGCCTGCAAAATGGGATA  700

seq1  TGTGCCCAGTGATGCAAATGACTGTGTAGTAACAATGATTATGGAGTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCCAGTGATGCAAATGACTGTGTAGTAACAATGATTATGGAGTAAC  750

seq1  AAAGTGCTGAGATCTGCTCCAAAAGAGGGGATTTCATGATTGATACTATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTGAGATCTGCTCCAAAAGAGGGGATTTCATGATTGATACTATA  800

seq1  GTCCTGATCAAAGGCTCAAGTTAGGGATGTTATAGTCCCTAAAATAAAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTGATCAAAGGCTCAAGTTAGGGATGTTATAGTCCCTAAAATAAAAC  850

seq1  CTCTTGTTATTATTTTGCTCTATTCTCTTCAAGTTTAATTGTCTTCTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  CTCTTGTTATTATTTTGCTCTATTCTCTTCAAGTTTAATTGTCTTCT-AA  899

seq1  TTTTGTCTCTATGCACATAGACTTAGGCTGCTGTCAAATAAGTCAGAAAA  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTGTCTCTATGCACATAGACTTAGGCTGCTGTCAAATAAGTCAG-AAA  948

seq1  CCTATTTACATCAATCAGCATTCAACAGAGAGCACTGGAGGTCAAAATGC  1000
      |||||||||||| |||||||||| ||||||||||||||||||| ||||||
seq2  CCTATTTACATC-ATCAGCATTC-ACAGAGAGCACTGGAGGTC-AAATGC  995

seq1  TAAGAAGAAAAAACT-GAGTACTAAGCCCTAAAAGCAACATTTTTATTAA  1049
      ||||||| ||||||| |||||||||||| ||||||| ||||||||  | |
seq2  TAAGAAGGAAAAACTGGAGTACTAAGCCTTAAAAGC-ACATTTTTTATTA  1044

seq1  GCACACAAGCAACAAGAC-TCAGCAAGCAT-CATGGAAAAGAAGATGGAG  1097
      |||||||||||||| ||| |||||| |||| ||||| |||||||||||||
seq2  GCACACAAGCAACAGGACTTCAGCAGGCATCCATGG-AAAGAAGATGGAG  1093

seq1  T-GTAAGAGGCAAAGGA-CAAGGAGGAG  1123
      | || ||| |||||||| || |||||||
seq2  TGGTTAGA-GCAAAGGACCAGGGAGGAG  1120

seq1: chr7_111381116_111382281
seq2: B6Ng01-265J23.g_70_1208 (reverse)

seq1  GTTC-TCTTTCAGCCAGTACTCCAGCAAGCAGGGCGCCTACTCCAGGTAT  49
      |||| |||| |||||||||   ||||||||||     ||| |||||  ||
seq2  GTTCTTCTTCCAGCCAGTA--TCAGCAAGCAG-----CTATTCCAG--AT  41

seq1  CAGCCACAGTGTGGATACTGGGTGATTGGCTTGCAGTGTAAGCACGAGT-  98
      ||| |||||| ||||| ||||||||      ||| | || |||| |||| 
seq2  CAG-CACAGT-TGGAT-CTGGGTGA------TGCTGAGTTAGCA-GAGTA  81

seq1  ACAGAGCCTATGAGGATTCCTCCCCGTCCCTGCTCCT-CTCCATGACCGT  147
      |||||| |||||| |||  || ||||| | ||||||| ||||||||||||
seq2  ACAGAG-CTATGA-GAT--CT-CCCGT-CTTGCTCCTCCTCCATGACCGT  125

seq1  GCCACCTCGACGCATAGGGATTTTCTTAGACTGTGAGGCTGGCACGGTCT  197
      |||||||||||||||| |||||||||||||||||||||||||||| ||||
seq2  GCCACCTCGACGCATAAGGATTTTCTTAGACTGTGAGGCTGGCAC-GTCT  174

seq1  CCTTTTATAATGTCACAAACCACGGCTTGCCCATCTACACCTTCTCGAAG  247
      || ||||||||||||| || |||| | |||||||||||| ||||||||||
seq2  CC-TTTATAATGTCACCAAACACGAC-TGCCCATCTACA-CTTCTCGAAG  221

seq1  TATTACTTTCCTTCTGCCCTTTGTCCCTATTTTAATCCCTGCAGCTGTAT  297
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTTT-CTTCTGCCCTTTGTCCCTATTTTAATCCCTGCAGCTGTAT  270

seq1  AGTCCCGATGACCCTGCGGCGGCCAACTTCCTGAGGTCTGTTACCCCTGC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCGATGACCCTGCGGCGGCCAACTTCCTGAGGTCTGTTACCCCTGC  320

seq1  CCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTCT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAACTAAGCAGATTCCTTCAAACACATGAATCTCCATTCTCTGTTCT  370

seq1  CCTAGTAGGATACCTTCCATTGCTAAGAGTGCGCACCCTTAAGCCATCTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAGGATACCTTCCATTGCTAAGAGTGCGCACCCTTAAGCCATCTC  420

seq1  ATGGAAAAGCATTTAGTGTTTTGGGGTTTTTGTATTTTTGCTTTTGGGTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAAAGCATTTAGTGTTTTGGGGTTTTTGTATTTTTGCTTTTGGGTT  470

seq1  GTTTATTTTTGTTTTTTGTTTTTTATTTTTAGAGATAGGGTTTCTGGAAC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTTTTGTTTTTTGTTTTTTATTTTTAGAGATAGGGTTTCTGGAAC  520

seq1  TCTGTAGGTCAAACTGGCCTTAAACTTGGAGAGATCCGCTTGCCTCTCCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAGGTCAAACTGGCCTTAAACTTGGAGAGATCCGCTTGCCTCTCCT  570

seq1  GAGTGCTGGGACACCAGTCTAGTTGTGTTTTGGTTTTGGGTTTTTTGTTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTGGGACACCAGTCTAGTTGTGTTTTGGTTTTGGGTTTTTTGTTT  620

seq1  GTTTGTTTGTTTTTTGTTTGTTTGTATTTTTGAAACAGGCTGGCCTTGAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTGTTTTTTGTTTGTTTGTATTTTTGAAACAGGCTGGCCTTGAA  670

seq1  CTCTGTGATTGAGAAACTAACTGAGAACTGATCCAGAGTCCCGATTACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGATTGAGAAACTAACTGAGAACTGATCCAGAGTCCCGATTACAA  720

seq1  GTGGACATCACCATACCTGGCTGTGAATTTGTTTTAGTGTTGTTTGAGAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACATCACCATACCTGGCTGTGAATTTGTTTTAGTGTTGTTTGAGAT  770

seq1  AGGGTCTCCATAAATAGCCCAAACTGGCCACAGACTCAGTCCATTTGCCT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTCTCCATAAATAGCCCAAACTGGCCACAGACTCAGTCCATTTGCCT  820

seq1  CACTCCCAAATACTGATTATAGATCTACCTCACAGTGCCTGACTGAGCTC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCAAATACTGATTATAGATCTACCTCACAGTGCCTGACTGAGCTC  870

seq1  CCAAATACTGATTATAGCTCTACCTCACAGCACCTGACTGAGCTCCCAAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATACTGATTATAGCTCTACCTCACAGCACCTGACTGAGCTCCCAAA  920

seq1  TACTGATTATAGATCTACCTCACAGTGCCTGACTGAGCTCCCAAATACTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATTATAGATCTACCTCACAGTGCCTGACTGAGCTCCCAAATACTG  970

seq1  ATTATAGATCTACCTCACAGCGCCTGACTGAGCTCTCAAATACTGATTAT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATAGATCTACCTCACAGCGCCTGACTGAGCTCTCAAATACTGATTAT  1020

seq1  AGCTCTACCTCACAGCGCCTGACTGAGCACATTTGACGACTTTTTTCTTT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTACCTCACAGCGCCTGACTGAGCACATTTGACGACTTTTTTCTTT  1070

seq1  ACTAATGTCTGTGGTCAAATGTAAAGAACCTCTGAATTAGATAGGAATTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATGTCTGTGGTCAAATGTAAAGAACCTCTGAATTAGATAGGAATTT  1120

seq1  TTTAATAAATATTGAATTC  1166
      |||||||||||||||||||
seq2  TTTAATAAATATTGAATTC  1139