BAC Information

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BAC

Clone NameB6Ng01-265O15
Chromosome7 (Build37)
Map Location 28,263,491 - 28,398,915
singlet/doubletdoublet
Overlap geneSertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2
Upstream geneNlrp9a, V1re12, EG243881, LOC623830, Cyp2b19, Cyp2g1, LOC100043745, Cyp2a5, EG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3
Downstream geneTtc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59, 4732475C15Rik, Prkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265O15.bB6Ng01-265O15.g
ACCGA069439GA069440
length1,0401,166
definitionB6Ng01-265O15.b B6Ng01-265O15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(28,398,057 - 28,398,915)(28,263,491 - 28,264,655)
sequence
gaattcaacttaggagatataaagataaaaggaaaatgactcgaaacaga
aaacaaaagacagaatctatgaaaacaagtcactgtaataaagcagttca
ccaccttgactgacagacgctatctcgatatctcggaacagaatggatca
acatgacagagggcaagacaaacagcctttgctgctgtcactgtcacaaa
gcagagactgcaaggttccctgaggtcaggagcaataccaggatgtctgt
tttcaccaatgctaacaagcaaacttactatcggctcacgactgactgaa
gttccattctacaaagtagctgaactgtcacttaggtctttttttttggg
gggggggggcaaaaatataaaaggcatccacactgaaaaggaagaagtag
tggaattgcctttatttgcaggagacaagaggctacatagtaaaaaccac
agaagaatccaaacacagctgggatgtggctcagctgtaaagcccctgtc
tagaaaataagaagctgggtgccagcctaagcaacgcataatccgggcat
gggagatgaagcaggaagaccaggacttcactatcatcctcagcctcaca
gcaagttcatggagagctctggctttctgggaatgtgggagagaagccaa
gcatcgtggcacatgactctatagtcctagctaccaaaggctgaggtagg
agacctgtgtgaggcaagtgtttcaggccagcctaggcaacatagcaaac
agcaacaatgggagaaacaggaggatgacagagaggggaaggaaaaaaga
caggcaggcagacagacgggcagactagctgaccagccagggtgcagttg
tgcaaacccgtaagctcagcacagaggaggctgagccaggaggagcagcg
tgagctcaaggccaggtggtggcacatcactgagcaggagtggcttagca
ggaggatcaccaagcattaagactaaccagggctacataacaaggctata
atggactcatataaataaataagcattctttaaaaatatt
gaattcacatctggcttgagaggggcaaagcaaggctgtggagagtgagg
gtaagaaaaaggaaggccagggaaggagtgtcacacatcaatgccctgcc
catgccaagtgaacgtaccctgcattagggacttttctggaagggtttca
tggcaaagatggggatttctgtttgtggtttcttggctttccaacagaag
tcgtcgcctttgagtgaggtgggggcgtggccttgtatctaagaaagtgc
acaggtcatctgaaagtaagactaacccaaagagagataaggacactaca
ggaaagtgacttaaaaagtctgtatcctgggctggacaaatagctcagtg
gctaaaggcaccgactgctcttccagaggtcctgagttcaattcccagcc
accacatgttggctcacagccatctgtaatgggatctgatgccctcttct
ggtgtgtctgaagacagcgacagtgtactcatatgcgtaaggtagcctgc
aatatgtacaggtggacagcaagagattctgtcctgtccttggacaacaa
caaaaaagggtgctaactaaataacatctttctcttcttgaaacttctcc
cactcccactcaaaataaaaacaagggtctgattcagtctcacactctac
aacttcctcagtttcagcccctactctccttcactcaactctatatttgg
gttggtctccaaccttaagctcatttctacgccaggacctttgtctaggt
taactttcttcccaaagggtacttctcgcctagcttcaccagaccaaaag
ttccctgcttttgctggctcaatgtcccatgagtaccactatcctgttac
atcctgattgatattgttgttgttgttgctattagtaatagtagtggcaa
taataggtctggaacccagagcctttgcacatgcgtagcaagggttttac
caactaagctaacacttagccttgttgcctttccttcccaaaatgttttt
attttattttacttgagtgtgtattggttatttttcctgcatgccatgtc
agcggtaccacatgaatgcttagtgcctggttactggtgtactcttgagc
ctggcaagagggcgtccgatccttggaatctgagtaacagaatgtgacat
catgtgagtgtagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28398057_28398915
seq2: B6Ng01-265O15.b_48_907 (reverse)

seq1  CGGGTTTGCACAACTGCA-CCTGGCTGGTCAGCTAGTCTGCCCGTCTGTC  49
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  CGGGTTTGCACAACTGCACCCTGGCTGGTCAGCTAGTCTGCCCGTCTGTC  50

seq1  TGCCTGCCTGTCTTTTTTCCTTCCCCTCTCTGTCATCCTCCTGTTTCTCC  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGCCTGTCTTTTTTCCTTCCCCTCTCTGTCATCCTCCTGTTTCTCC  100

seq1  CATTGTTGCTGTTTGCTATGTTGCCTAGGCTGGCCTGAAACACTTGCCTC  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGCTGTTTGCTATGTTGCCTAGGCTGGCCTGAAACACTTGCCTC  150

seq1  ACACAGGTCTCCTACCTCAGCCTTTGGTAGCTAGGACTATAGAGTCATGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGTCTCCTACCTCAGCCTTTGGTAGCTAGGACTATAGAGTCATGT  200

seq1  GCCACGATGCTTGGCTTCTCTCCCACATTCCCAGAAAGCCAGAGCTCTCC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGATGCTTGGCTTCTCTCCCACATTCCCAGAAAGCCAGAGCTCTCC  250

seq1  ATGAACTTGCTGTGAGGCTGAGGATGATAGTGAAGTCCTGGTCTTCCTGC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACTTGCTGTGAGGCTGAGGATGATAGTGAAGTCCTGGTCTTCCTGC  300

seq1  TTCATCTCCCATGCCCGGATTATGCGTTGCTTAGGCTGGCACCCAGCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCTCCCATGCCCGGATTATGCGTTGCTTAGGCTGGCACCCAGCTTC  350

seq1  TTATTTTCTAGACAGGGGCTTTACAGCTGAGCCACATCCCAGCTGTGTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTAGACAGGGGCTTTACAGCTGAGCCACATCCCAGCTGTGTTT  400

seq1  GGATTCTTCTGTGGTTTTTACTATGTAGCCTCTTGTCTCCTGCAAATAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTTCTGTGGTTTTTACTATGTAGCCTCTTGTCTCCTGCAAATAAA  450

seq1  GGCAATTCCACTACTTCTTCCTTTTCAGTGTGGATGCCTTTTATATTTTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATTCCACTACTTCTTCCTTTTCAGTGTGGATGCCTTTTATATTTTT  500

seq1  GCCCCCCCCCCCCAAAAAAAAAGACCTAAGTGACAGTTCAGCTACTTTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCCCCCCCCCAAAAAAAAAGACCTAAGTGACAGTTCAGCTACTTTGT  550

seq1  AGAATGGAACTTCAGTCAGTCGTGAGCCGATAGTAAGTTTGCTTGTTAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGAACTTCAGTCAGTCGTGAGCCGATAGTAAGTTTGCTTGTTAGC  600

seq1  ATTGGTGAAAACAGACATCCTGGTATTGCTCCTGACCTCAGGGAACCTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTGAAAACAGACATCCTGGTATTGCTCCTGACCTCAGGGAACCTTG  650

seq1  CAGTCTCTGCTTTGTGACAGTGACAGCAGCAAAGGCTGTTTGTCTTGCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTGCTTTGTGACAGTGACAGCAGCAAAGGCTGTTTGTCTTGCCC  700

seq1  TCTGTCATGTTGATCCATTCTGTTCCGAGATATCGAGATAGCGTCTGTCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCATGTTGATCCATTCTGTTCCGAGATATCGAGATAGCGTCTGTCA  750

seq1  GTCAAGGTGGTGAACTGCTTTATTACAGTGACTTGTTTTCATAGATTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAGGTGGTGAACTGCTTTATTACAGTGACTTGTTTTCATAGATTCTG  800

seq1  TCTTTTGTTTTCTGTTTCGAGTCATTTTCCTTTTATCTTTATATCTCCTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTGTTTTCTGTTTCGAGTCATTTTCCTTTTATCTTTATATCTCCTA  850

seq1  AGTTGAATTC  859
      ||||||||||
seq2  AGTTGAATTC  860

seq1: chr7_28263491_28264655
seq2: B6Ng01-265O15.g_67_1232

seq1  GAATTCACATCTGGCTTGAGAGGGGCAAAGCAAGGCTGTGGAGAGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACATCTGGCTTGAGAGGGGCAAAGCAAGGCTGTGGAGAGTGAGG  50

seq1  GTAAGAAAAAGGAAGGCCAGGGAAGGAGTGTCACACATCAATGCCCTGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGAAAAAGGAAGGCCAGGGAAGGAGTGTCACACATCAATGCCCTGCC  100

seq1  CATGCCAAGTGAACGTACCCTGCATTAGGGACTTTTCTGGAAGGGTTTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAAGTGAACGTACCCTGCATTAGGGACTTTTCTGGAAGGGTTTCA  150

seq1  TGGCAAAGATGGGGATTTCTGTTTGTGGTTTCTTGGCTTTCCAACAGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGATGGGGATTTCTGTTTGTGGTTTCTTGGCTTTCCAACAGAAG  200

seq1  TCGTCGCCTTTGAGTGAGGTGGGGGCGTGGCCTTGTATCTAAGAAAGTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCGCCTTTGAGTGAGGTGGGGGCGTGGCCTTGTATCTAAGAAAGTGC  250

seq1  ACAGGTCATCTGAAAGTAAGACTAACCCAAAGAGAGATAAGGACACTACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCATCTGAAAGTAAGACTAACCCAAAGAGAGATAAGGACACTACA  300

seq1  GGAAAGTGACTTAAAAAGTCTGTATCCTGGGCTGGACAAATAGCTCAGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGTGACTTAAAAAGTCTGTATCCTGGGCTGGACAAATAGCTCAGTG  350

seq1  GCTAAAGGCACCGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAAGGCACCGACTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCC  400

seq1  ACCACATGTTGGCTCACAGCCATCTGTAATGGGATCTGATGCCCTCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACATGTTGGCTCACAGCCATCTGTAATGGGATCTGATGCCCTCTTCT  450

seq1  GGTGTGTCTGAAGACAGCGACAGTGTACTCATATGCGTAAGGTAGCCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTGTCTGAAGACAGCGACAGTGTACTCATATGCGTAAGGTAGCCTGC  500

seq1  AATATGTACAGGTGGACAGCAAGAGATTCTGTCCTGTCCTTGGACAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGTACAGGTGGACAGCAAGAGATTCTGTCCTGTCCTTGGACAACAA  550

seq1  CAAAAAAGGGTGCTAACTAAATAACATCTTTCTCTTCTTGAAACTTCTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAGGGTGCTAACTAAATAACATCTTTCTCTTCTTGAAACTTCTCC  600

seq1  CACTCCCACTCAAAATAAAAACAAGGGTCTGATTCAGTCTCACACTCTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCCCACTCAAAATAAAAACAAGGGTCTGATTCAGTCTCACACTCTAC  650

seq1  AACTTCCTCAGTTTCAGCCCCTACTCTCCTTCACTCAACTCTATATTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTCCTCAGTTTCAGCCCCTACTCTCCTTCACTCAACTCTATATTTGG  700

seq1  GTTGGTCTCCAACCTTAAGCTCATTTCTACGCCAGGACCTTTGTCTAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTCTCCAACCTTAAGCTCATTTCTACGCCAGGACCTTTGTCTAGGT  750

seq1  TAACTTTCTTCCCAAAGGGTACTTCTCGCCTAGCTTCACCAGACCAAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCTTCCCAAAGGGTACTTCTCGCCTAGCTTCACCAGACCAAAAG  800

seq1  TTCCCTGCTTTTGCTGGCTCAATGTCCCATGAGTACCACTATCCTGTTAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGCTTTTGCTGGCTCAATGTCCCATGAGTACCACTATCCTGTTAC  850

seq1  ATCCTGATTGATATTGTTGTTGTTGTTGCTATTAGTAATAGTAGTGGCAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGATTGATATTGTTGTTGTTGTTGCTATTAGTAATAGTAGTGGCAA  900

seq1  TAATAGGTCTGGAACCCAGAGCC-TTGCACATGCGTAGCAAGGGTTTTAC  949
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TAATAGGTCTGGAACCCAGAGCCTTTGCACATGCGTAGCAAGGGTTTTAC  950

seq1  C-ACTAAGCT-ACACTTTAGCCTTGTTTGCCTTTTCCTCCCAAAATG-TT  996
      | |||||||| |||| ||||||||| |||||||| | |||||||||| ||
seq2  CAACTAAGCTAACAC-TTAGCCTTG-TTGCCTTTCCTTCCCAAAATGTTT  998

seq1  TTATTTTATTTTACTTTGAGTGTGTA-TGGGTATTTTTCCTGCATG-CAT  1044
      |||||||||||||| ||||||||||| ||| ||||||||||||||| |||
seq2  TTATTTTATTTTAC-TTGAGTGTGTATTGGTTATTTTTCCTGCATGCCAT  1047

seq1  GTCAGC-GTACCACATGTATGCCTAGTGCCCTGGTACTGTGGTACTCTTG  1093
      |||||| |||||||||| |||| |||||||  | |||||  |||||||| 
seq2  GTCAGCGGTACCACATGAATGCTTAGTGCCTGGTTACTGGTGTACTCTT-  1096

seq1  GAGGCTGG-AAGAGGGCGTCAGATCCCCTTGG-ATCTGAGTGACAGATTG  1141
      ||| |||| ||||||||||| |||  |||||| |||||||| ||||| ||
seq2  GAGCCTGGCAAGAGGGCGTCCGAT--CCTTGGAATCTGAGTAACAGAATG  1144

seq1  TGAGCCACCATGTGAGTGTAGAAA  1165
      |||  || ||||||||||||||||
seq2  TGA--CATCATGTGAGTGTAGAAA  1166