BAC Information

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BAC

Clone NameB6Ng01-266E03
Chromosome7 (Build37)
Map Location 139,144,075 - 139,268,744
singlet/doubletdoublet
Overlap geneGpr26, Cpxm2
Upstream geneDmbt1, 4933402N03Rik, 5430419D17Rik, LOC546006, LOC100043173, Cuzd1, 1700007K09Rik, 1700063I17Rik, 2310057M21Rik, Pstk, Ikzf5, Acadsb, Hmx3, Hmx2, Bub3, LOC677073, LOC100043679
Downstream gene4631426J05Rik, LOC100043682, LOC100043683, Oat, Nkx1-2, 2310007H09Rik, A930008G19Rik, 2010208K18Rik, C430003P19Rik, Zranb1, Ctbp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-266E03.bB6Ng01-266E03.g
ACCGA069697GA069698
length1,128237
definitionB6Ng01-266E03.b B6Ng01-266E03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(139,267,600 - 139,268,744)(139,144,075 - 139,144,311)
sequence
gaattcaggtgtcattaggaaaaggtacagggcaccttgtgtgagtacca
tgaagtaattatttctgttaggttatttttggtgaccatttgaaacacag
agatggatgaactgtgaactctgggtagttttaggtatggacatagcagg
gttctggtttctacctgacaaatacataggctcatttttaaaaggcaaat
ttatctttaaaaggtttttaaatataaatctatacacaggcattgataga
tagatagatagatagatagaaaatagacatgtatgaaaaggagggttgta
cataccccagtaggcacagtcttctgaattttaatgttttaacaatagct
atttatgtaattttggtggcttctggtattacactggtcacaagatttga
gccattaaaaagaatattttagtatacgaaattttttgaattttgttgaa
gaagatatttgtcatttatgtcataggaaaggagatctgcttcctgcact
tgattcattaaatcatgtgaccagctatcttgatctgcttgaaaccagac
agaacagtcctaggaaaagcagcactgactctccacttgctgtatagaat
gtggctggtggcacagagtcttttttttgcaggtggttgtttttttcatt
gatatcaaaaaattcagaagctagatatggtagcacctgcccatgatccc
agtgctccagagactgaggtggaaggattaccatagaattaaagccaacc
tggtctatgtagtaaattctaggacagcctaagttatagagagagacttt
gttttaaattaacaaaacaaagtaaaacaaaaagaatttaagaatggaca
cagaagggcccttggagacaatttgttagctctagaaagaagaacaccct
gacatcatgctcaaggtgttggggaaggagggaataggaagtcactctta
atagaacacagtgaagctaccaccttgagactaagatagcactctaggag
ggggaggagctatgcacgtaggacctttgttctttgtagctttactgagg
taggtaaatgttctggtctcagatctgtaagctgggtgaacagcatgctc
cacccttgagcctaatcagggtgtgtga
tagtcctgctcccagatatcagcacagacagatactgcttgtggagacag
ttgctgcctgactcaaggtgatctataacatctcccatctccttcaaagc
aatctcctcttctgtatgacctagttttaaaaattgggttataaagacaa
atactcttgctaaaatgcctggctctatgccaatatagtccttaggtata
gcctctgaccttttggagtagatgatggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_139267600_139268744
seq2: B6Ng01-266E03.b_46_1172 (reverse)

seq1  CACACACCCCTTGA-TAGGCTCCAAAGGGTGGAGCATTGCTGTCACACCC  49
      |||||||||  ||| |||||||  |||||||||||| ||||||  |||||
seq2  CACACACCC--TGATTAGGCTC--AAGGGTGGAGCA-TGCTGT-TCACCC  44

seq1  AAGGCTTACAGATCCTGAGACAAGAACCATTTTACACTACCTTCAGTAAA  99
      |  |||||||||| ||||||| |||||   ||||| ||||| ||||| ||
seq2  A--GCTTACAGAT-CTGAGACCAGAAC--ATTTAC-CTACC-TCAGT-AA  86

seq1  AGCTACAAAGAACAAAGGTCCTACGTGCATAGCTCCTCCCCCTTCCTAGA  149
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  AGCTACAAAGAACAAAGGTCCTACGTGCATAGCTCCTCCCCC-TCCTAGA  135

seq1  GTGCTATCTTAGTTCTCCAAGGT-GTAGCTTTCACCTGTGTTCTATTAAG  198
      |||||||||||| ||| |||||| ||||| |||| |||||||||||||||
seq2  GTGCTATCTTAG-TCT-CAAGGTGGTAGC-TTCA-CTGTGTTCTATTAAG  181

seq1  AGTGACTTCCTATTCCCCTCCTTCCCCAACACCTTGAGCATGATGTCAGG  248
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGTGACTTCCTATT-CCCTCCTTCCCCAACACCTTGAGCATGATGTCAGG  230

seq1  GTGTTCTTCTTTCTAGAGCTAACAAATTGTCTCCAAGGGCCCTTCTGTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCTTCTTTCTAGAGCTAACAAATTGTCTCCAAGGGCCCTTCTGTGT  280

seq1  CCATTCTTAAATTCTTTTTGTTTTACTTTGTTTTGTTAATTTAAAACAAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTTAAATTCTTTTTGTTTTACTTTGTTTTGTTAATTTAAAACAAA  330

seq1  GTCTCTCTCTATAACTTAGGCTGTCCTAGAATTTACTACATAGACCAGGT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTCTCTATAACTTAGGCTGTCCTAGAATTTACTACATAGACCAGGT  380

seq1  TGGCTTTAATTCTATGGTAATCCTTCCACCTCAGTCTCTGGAGCACTGGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTAATTCTATGGTAATCCTTCCACCTCAGTCTCTGGAGCACTGGG  430

seq1  ATCATGGGCAGGTGCTACCATATCTAGCTTCTGAATTTTTTGATATCAAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGGGCAGGTGCTACCATATCTAGCTTCTGAATTTTTTGATATCAAT  480

seq1  GAAAAAAACAACCACCTGCAAAAAAAAGACTCTGTGCCACCAGCCACATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAACAACCACCTGCAAAAAAAAGACTCTGTGCCACCAGCCACATT  530

seq1  CTATACAGCAAGTGGAGAGTCAGTGCTGCTTTTCCTAGGACTGTTCTGTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACAGCAAGTGGAGAGTCAGTGCTGCTTTTCCTAGGACTGTTCTGTC  580

seq1  TGGTTTCAAGCAGATCAAGATAGCTGGTCACATGATTTAATGAATCAAGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTCAAGCAGATCAAGATAGCTGGTCACATGATTTAATGAATCAAGT  630

seq1  GCAGGAAGCAGATCTCCTTTCCTATGACATAAATGACAAATATCTTCTTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGAAGCAGATCTCCTTTCCTATGACATAAATGACAAATATCTTCTTC  680

seq1  AACAAAATTCAAAAAATTTCGTATACTAAAATATTCTTTTTAATGGCTCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTCAAAAAATTTCGTATACTAAAATATTCTTTTTAATGGCTCA  730

seq1  AATCTTGTGACCAGTGTAATACCAGAAGCCACCAAAATTACATAAATAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGTGACCAGTGTAATACCAGAAGCCACCAAAATTACATAAATAGC  780

seq1  TATTGTTAAAACATTAAAATTCAGAAGACTGTGCCTACTGGGGTATGTAC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTTAAAACATTAAAATTCAGAAGACTGTGCCTACTGGGGTATGTAC  830

seq1  AACCCTCCTTTTCATACATGTCTATTTTCTATCTATCTATCTATCTATCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCCTTTTCATACATGTCTATTTTCTATCTATCTATCTATCTATCT  880

seq1  ATCAATGCCTGTGTATAGATTTATATTTAAAAACCTTTTAAAGATAAATT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGCCTGTGTATAGATTTATATTTAAAAACCTTTTAAAGATAAATT  930

seq1  TGCCTTTTAAAAATGAGCCTATGTATTTGTCAGGTAGAAACCAGAACCCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTTAAAAATGAGCCTATGTATTTGTCAGGTAGAAACCAGAACCCT  980

seq1  GCTATGTCCATACCTAAAACTACCCAGAGTTCACAGTTCATCCATCTCTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGTCCATACCTAAAACTACCCAGAGTTCACAGTTCATCCATCTCTG  1030

seq1  TGTTTCAAATGGTCACCAAAAATAACCTAACAGAAATAATTACTTCATGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCAAATGGTCACCAAAAATAACCTAACAGAAATAATTACTTCATGG  1080

seq1  TACTCACACAAGGTGCCCTGTACCTTTTCCTAATGACACCTGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCACACAAGGTGCCCTGTACCTTTTCCTAATGACACCTGAATTC  1127

seq1: chr7_139144075_139144311
seq2: B6Ng01-266E03.g_74_310

seq1  TAGTCCTGCTCCCAGATATCAGCACAGACAGATACTGCTTGTGGAGACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCCTGCTCCCAGATATCAGCACAGACAGATACTGCTTGTGGAGACAG  50

seq1  TTGCTGCCTGACTCAAGGTGATCTATAACATCTCCCATCTCCTTCAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGCCTGACTCAAGGTGATCTATAACATCTCCCATCTCCTTCAAAGC  100

seq1  AATCTCCTCTTCTGTATGACCTAGTTTTAAAAATTGGGTTATAAAGACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCCTCTTCTGTATGACCTAGTTTTAAAAATTGGGTTATAAAGACAA  150

seq1  ATACTCTTGCTAAAATGCCTGGCTCTATGCCAATATAGTCCTTAGGTATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTGCTAAAATGCCTGGCTCTATGCCAATATAGTCCTTAGGTATA  200

seq1  GCCTCTGACCTTTTGGAGTAGATGATGGGGGGGGGGG  237
      |||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGACCTTTTGGAGTAGATGATGGGGGGGGGGG  237