BAC Information

Click to search

BAC

Clone NameB6Ng01-267M05
Chromosome7 (Build37)
Map Location 131,112,508 - 131,249,881
singlet/doubletdoublet
Overlap geneEG628779
Upstream gene4930413G21Rik, Rbbp6, LOC628696, LOC100042977, LOC100042981, Tnrc6a, Slc5a11, Arhgap17, Lcmt1, Aqp8, Zkscan2, LOC100043482
Downstream geneEG545999
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267M05.bB6Ng01-267M05.g
ACCGA070800GA070801
length1,1741,098
definitionB6Ng01-267M05.b B6Ng01-267M05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(131,112,508 - 131,113,656)(131,248,817 - 131,249,881)
sequence
ggaattcatgctgtactatgccttttttttatgcttgtttcttcttagct
gtgaacttctgggatcacctgatcactgctcggcgcgtacacaaaacaga
tgataaaggatttctgcaagacaagacactgctcgctttggctgtggatt
gcacaatccaactgtatttatggtagaaaaaaagagggaggggaccaaac
tgcaagtaagagcttctggggaagagatgtttacccgccggaacatatta
gattctgataagatgcttggaagaccttatgtttttaggttccaagtagt
tgggatcgatttaaactcatggccacccctgcatttctgctcaacagaat
taaattgtggatccctttctctgaggtctgagaagctggcatattcttct
ccttgggcctatagtttcaagcagatttactttctccaaaggatggattc
tgtcttctttagacctgtttggtggtggtggtgctctacagctgaaagac
ctgtcctagtgttagatgtcattccatagcagtttgtggccaccctttgc
tggttttctgtctgcattgagggtgtgtggagtttcagaagtgtctggac
ccctggtgggatagatcccggagacctggagtccaggcagtgtacagctc
tgtctatccatccatcatccatctgtccatcttagcactgtcagttgtcc
ccagtgatagggatccgactttcatattaaatctgttgccgcttgctctg
tgtttcccctccttctcccttagtcaaaccatgtctcccagttttgtgat
gattatggcttattccacagcaccgctaccatcttctcacgcatgatcca
tttcttcaaatctcttgcacctgccagtgagtttctgggggagcagtgcc
tgcctctgcattctcccctttcatcttctgtaaatctccctgtggaatgc
tttttcccctcctgtgtaaggcgtcctgtttaaatgatgttttctagtta
ttcctacaaggttttattacaatcctaatacgatgtgtctaaaaccaatc
ttcataagtgtgtggaatcctaccccagaacggaaaggaaacaggcaatt
ggaatgttgcatccacaacaaggtacttgcctctctacacaggccttgga
tggaggtataaaaggttggggtga
gaattcatggctctatgacctgggtaaggtctaactacaacagtgtttac
tagaaatccttgcattgatagcagtctttctttatgctactaccatgtga
caacagtagatactagaaagataggaccacaccatggtcagggtgtacct
catggacacatgcttaaacacttcctaggtatgtgaacaggtgaccagga
tccaagtttatctctatgaaatggctaagcatcataagtaattttctgtc
tttacctttctcatttaattttctactctattctgtaatgaattttactg
ctctacagtttccatataataaaaaacaaagccattacacagttagcatg
atagggtttgacaaccatgtacttatgagttacttctacaaaaaaaccaa
aaaacaaaaacaaaaacaaacaaacaaacaaaaaacccaagttagaaagc
aaagccattgcctccaaaatccctttgtgctcctcccagaccactgactg
ccaatcaaccatagacaaacaagatcaagatcatatcaaacattatcttt
ttttgtctgataatgcccttttaaatttattttttgagaatttaaaaaag
actaatgtttttgcctttcatgcatgatgtcatgcgtagcactgcccttt
ctggtgtagctgtcaatgatcccttgaatgaacatgtatcacaatctctt
gagcatttatccttacatgtgaattgctttcaggtttgggtttttataaa
gctgtcatgcacatttttaaagaagtcatcttgtagatatgagttcaaat
ttctcttaagtaaagtatctggcagtggacttctggtttactgggtaaac
agaggtaaatttttataagaaattaacaagcagtttcttttaccacagca
tggcattggaacacatcccacaagccaaggcagtattcccactggtggcc
ccacatcctaacatttggctttcatagttttttgcttttggccattggtg
gaagggattatagaatatttcttgggtagtttaaatttagatttcctggt
aatattatattggcctggttcatcacttcctagctctatatggttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_131112508_131113656
seq2: B6Ng01-267M05.b_46_1218

seq1  GAATTCATGCTGTACTATGCCTTTTTTTTATGCTTGTTTCTTCTTAGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTGTACTATGCCTTTTTTTTATGCTTGTTTCTTCTTAGCTG  50

seq1  TGAACTTCTGGGATCACCTGATCACTGCTCGGCGCGTACACAAAACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTTCTGGGATCACCTGATCACTGCTCGGCGCGTACACAAAACAGAT  100

seq1  GATAAAGGATTTCTGCAAGACAAGACACTGCTCGCTTTGGCTGTGGATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAGGATTTCTGCAAGACAAGACACTGCTCGCTTTGGCTGTGGATTG  150

seq1  CACAATCCAACTGTATTTATGGTAGAAAAAAAGAGGGAGGGGACCAAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCCAACTGTATTTATGGTAGAAAAAAAGAGGGAGGGGACCAAACT  200

seq1  GCAAGTAAGAGCTTCTGGGGAAGAGATGTTTACCCGCCGGAACATATTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTAAGAGCTTCTGGGGAAGAGATGTTTACCCGCCGGAACATATTAG  250

seq1  ATTCTGATAAGATGCTTGGAAGACCTTATGTTTTTAGGTTCCAAGTAGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGATAAGATGCTTGGAAGACCTTATGTTTTTAGGTTCCAAGTAGTT  300

seq1  GGGATCGATTTAAACTCATGGCCACCCCTGCATTTCTGCTCAACAGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCGATTTAAACTCATGGCCACCCCTGCATTTCTGCTCAACAGAATT  350

seq1  AAATTGTGGATCCCTTTCTCTGAGGTCTGAGAAGCTGGCATATTCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGTGGATCCCTTTCTCTGAGGTCTGAGAAGCTGGCATATTCTTCTC  400

seq1  CTTGGGCCTATAGTTTCAAGCAGATTTACTTTCTCCAAAGGATGGATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGCCTATAGTTTCAAGCAGATTTACTTTCTCCAAAGGATGGATTCT  450

seq1  GTCTTCTTTAGACCTGTTTGGTGGTGGTGGTGCTCTACAGCTGAAAGACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCTTTAGACCTGTTTGGTGGTGGTGGTGCTCTACAGCTGAAAGACC  500

seq1  TGTCCTAGTGTTAGATGTCATTCCATAGCAGTTTGTGGCCACCCTTTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCTAGTGTTAGATGTCATTCCATAGCAGTTTGTGGCCACCCTTTGCT  550

seq1  GGTTTTCTGTCTGCATTGAGGGTGTGTGGAGTTTCAGAAGTGTCTGGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTCTGTCTGCATTGAGGGTGTGTGGAGTTTCAGAAGTGTCTGGACC  600

seq1  CCTGGTGGGATAGATCCCGGAGACCTGGAGTCCAGGCAGTGTACAGCTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGGGATAGATCCCGGAGACCTGGAGTCCAGGCAGTGTACAGCTCT  650

seq1  GTCTATCCATCCATCATCCATCTGTCCATCTTAGCACTGTCAGTTGTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTATCCATCCATCATCCATCTGTCCATCTTAGCACTGTCAGTTGTCCC  700

seq1  CAGTGATAGGGATCCGACTTTCATATTAAATCTGTTGCCGCTTGCTCTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGATAGGGATCCGACTTTCATATTAAATCTGTTGCCGCTTGCTCTGT  750

seq1  GTTT-CCCTCCTTCTCCCTTAGTCAAACCATGTCTCCCAGTTTTGTGATG  799
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCCCTCCTTCTCCCTTAGTCAAACCATGTCTCCCAGTTTTGTGATG  800

seq1  ATTATGGCTTATTCCACAGCACCGCTACCATCTTCTCACGCATGATCCA-  848
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTATGGCTTATTCCACAGCACCGCTACCATCTTCTCACGCATGATCCAT  850

seq1  TTCTTCAAACCTCTTGCACCTGCCAG-GAG-TTCTGGGGGAGCAGTGCCT  896
      ||||||||| |||||||||||||||| ||| |||||||||||||||||||
seq2  TTCTTCAAATCTCTTGCACCTGCCAGTGAGTTTCTGGGGGAGCAGTGCCT  900

seq1  GCCTCTGCATTCTCCCCTTTCATC-TCTGTAAATCTCCCTGTGG-ATGCT  944
      |||||||||||||||||||||||| ||||||||||||||||||| |||||
seq2  GCCTCTGCATTCTCCCCTTTCATCTTCTGTAAATCTCCCTGTGGAATGCT  950

seq1  TTT--CCCTCCTGTGTCAGGCGTCCTGTTTAAATGATG-TTTCTAG-TAT  990
      |||  ||||||||||| ||||||||||||||||||||| ||||||| |||
seq2  TTTTCCCCTCCTGTGTAAGGCGTCCTGTTTAAATGATGTTTTCTAGTTAT  1000

seq1  TCCTACAGGTTTTTATTTACATCCT-ATACGATGTGTCTAAA--CCATCT  1037
      ||||||| | |||||||   ||||| ||||||||||||||||  | ||||
seq2  TCCTACAAGGTTTTATTACAATCCTAATACGATGTGTCTAAAACCAATCT  1050

seq1  TCATAAGTGTTGTGGA--TCTACCCCAG-ACGGAAA-GAAACAGGC-ATT  1082
      ||||||||| ||||||   ||||||||| ||||||| ||||||||| |||
seq2  TCATAAGTG-TGTGGAATCCTACCCCAGAACGGAAAGGAAACAGGCAATT  1099

seq1  GG-ATGTTGCATCTAC-ACAAAGCA-TTGCCTCCTCACACAGGCCCATGA  1129
      || |||||||||| || |||| | | |||||||   |||||||||   ||
seq2  GGAATGTTGCATCCACAACAAGGTACTTGCCTCTCTACACAGGCCTTGGA  1149

seq1  GGGAGG--TAAAAG--TGGGGTGA  1149
       |||||  ||||||  ||||||||
seq2  TGGAGGTATAAAAGGTTGGGGTGA  1173

seq1: chr7_131248817_131249881
seq2: B6Ng01-267M05.g_94_1163 (reverse)

seq1  AAAAACCATATAGAGCTAGGAAGTTGATGAAAACAAGCCAATATAATTAT  50
      ||||||||||||||||||||||| ||||| || || |||||||||||   
seq2  AAAAACCATATAGAGCTAGGAAG-TGATG-AACCAGGCCAATATAAT--A  46

seq1  TTACCAAGGAAATCTAAATTAAAACTA-CCAAGAAATATTCTATA--TCC  97
      ||||| |||||||||||||| |||||| |||||||||||||||||   ||
seq2  TTACC-AGGAAATCTAAATTTAAACTACCCAAGAAATATTCTATAATCCC  95

seq1  TTC--ACAATGGCAAAAAGCAAAAAACTATGAAAG-CAAATGTTAGGATG  144
      |||   ||||||| ||||||||||||||||||||| ||||||||||||||
seq2  TTCCACCAATGGCCAAAAGCAAAAAACTATGAAAGCCAAATGTTAGGATG  145

seq1  TGGGGGCCACAGTTGGAATACTGCCTT-GCTTGTGGGATGTGTT-CAATG  192
      ||||| |  |||| ||||||||||||| |||||||||||||||| |||||
seq2  TGGGGCCACCAGTGGGAATACTGCCTTGGCTTGTGGGATGTGTTCCAATG  195

seq1  CCATGCTGTGGTAAA--GAACTGCTTGTTAATTTCTTATAAAAATTTACC  240
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  CCATGCTGTGGTAAAAGAAACTGCTTGTTAATTTCTTATAAAAATTTACC  245

seq1  TCTGTTTACCCAGTAAACCAGAAGTCCACTGCCAGATACTTTACTTAAGA  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTACCCAGTAAACCAGAAGTCCACTGCCAGATACTTTACTTAAGA  295

seq1  GAAATTTGAACTCATATCTACAAGATGACTTCTTTAAAAATGTGCATGAC  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTGAACTCATATCTACAAGATGACTTCTTTAAAAATGTGCATGAC  345

seq1  AGCTTTATAAAAACCCAAACCTGAAAGCAATTCACATGTAAGGATAAATG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTATAAAAACCCAAACCTGAAAGCAATTCACATGTAAGGATAAATG  395

seq1  CTCAAGAGATTGTGATACATGTTCATTCAAGGGATCATTGACAGCTACAC  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAGATTGTGATACATGTTCATTCAAGGGATCATTGACAGCTACAC  445

seq1  CAGAAAGGGCAGTGCTACGCATGACATCATGCATGAAAGGCAAAAACATT  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGGGCAGTGCTACGCATGACATCATGCATGAAAGGCAAAAACATT  495

seq1  AGTCTTTTTTAAATTCTCAAAAAATAAATTTAAAAGGGCATTATCAGACA  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTTTTTAAATTCTCAAAAAATAAATTTAAAAGGGCATTATCAGACA  545

seq1  AAAAAAGATAATGTTTGATATGATCTTGATCTTGTTTGTCTATGGTTGAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGATAATGTTTGATATGATCTTGATCTTGTTTGTCTATGGTTGAT  595

seq1  TGGCAGTCAGTGGTCTGGGAGGAGCACAAAGGGATTTTGGAGGCAATGGC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTCAGTGGTCTGGGAGGAGCACAAAGGGATTTTGGAGGCAATGGC  645

seq1  TTTGCTTTCTAACTTGGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCTAACTTGGGTTTTTTGTTTGTTTGTTTGTTTTTGTTTTTGT  695

seq1  TTTTTGGTTTTTTTGTAGAAGTAACTCATAAGTACATGGTTGTCAAACCC  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGTTTTTTTGTAGAAGTAACTCATAAGTACATGGTTGTCAAACCC  745

seq1  TATCATGCTAACTGTGTAATGGCTTTGTTTTTTATTATATGGAAACTGTA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGCTAACTGTGTAATGGCTTTGTTTTTTATTATATGGAAACTGTA  795

seq1  GAGCAGTAAAATTCATTACAGAATAGAGTAGAAAATTAAATGAGAAAGGT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTAAAATTCATTACAGAATAGAGTAGAAAATTAAATGAGAAAGGT  845

seq1  AAAGACAGAAAATTACTTATGATGCTTAGCCATTTCATAGAGATAAACTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACAGAAAATTACTTATGATGCTTAGCCATTTCATAGAGATAAACTT  895

seq1  GGATCCTGGTCACCTGTTCACATACCTAGGAAGTGTTTAAGCATGTGTCC  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCCTGGTCACCTGTTCACATACCTAGGAAGTGTTTAAGCATGTGTCC  945

seq1  ATGAGGTACACCCTGACCATGGTGTGGTCCTATCTTTCTAGTATCTACTG  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGTACACCCTGACCATGGTGTGGTCCTATCTTTCTAGTATCTACTG  995

seq1  TTGTCACATGGTAGTAGCATAAAGAAAGACTGCTATCAATGCAAGGATTT  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACATGGTAGTAGCATAAAGAAAGACTGCTATCAATGCAAGGATTT  1045

seq1  CTAGTAAACACTGTTGTAGTTAGAC  1065
      |||||||||||||||||||||||||
seq2  CTAGTAAACACTGTTGTAGTTAGAC  1070