BAC Information

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BAC

Clone NameB6Ng01-267P06
Chromosome7 (Build37)
Map Location 6,862,844 - 6,863,605
singlet/doubletsinglet
Overlap geneUsp29
Upstream geneLOC100041666, V1rd6, EG384525, EG269859, Nlrp4c, Zfp787, Zfp444, Galp, Zfp371, EG627821, Zfp667, Zfp583, LOC100042467, LOC100042459, Zfp78, Zfp28, LOC100042450, Olfr1344, GA_x5J8B7W3DQU-679632-679375, Olfr1336, Olfr1346, Olfr5, Olfr1347, Olfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, LOC627961
Downstream geneAurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5, LOC100041883, EG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267P06.bB6Ng01-267P06.g
ACCGA070942GA070943
length426765
definitionB6Ng01-267P06.b B6Ng01-267P06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caagtttgtcgacttcaaggattttctatgaagttggaacactggtgaag
gcttagctatgtcagaattcaatctttaaaggcacttataataaaataat
actaaaagagaacatgtggatccatacaccaggctaacgctgggataggg
tatgaatatacggattatgagaatgcctggttccaggaggttgagtttcc
ttgaaactccctgcctcatgcgtgcttccaggcctctcggcctgtcaagc
agacttcactggagtgtgcatagcattgattgaatcacatttggttcttc
ctccctttttttcctctggatgcactctgatgataccatggctaccccat
ttgagctctgtttaaataaatattgtcctttcatgatgatgaagaagaag
gaggaggaggaggagatgaaggagga
gaattcctgcctgaggatggaagtcagaggtgggaaaaacaccggcccag
cccggaggggaggggaggggcacctacagcacagggaaggacaagagaga
ggtccagcctcaggactgtggaagcagaatcctgacttctgagagctgcc
ctctgacatctctgaagcactgtgggatatgtctgctcatcctcacagaa
acaaaaataaatcttaaaagaaaggaaaggagaaagaaaaagaaaatcag
atgtttgcttgatctcaaacacacccctgaacttcaaagactcattctac
tgaggaaaaaaaaaaaaaaaaactccgcatgaactgattggcttatcagc
ttgattgccagtcaagatgattgatagacttatcacctctttggccctgc
tatctgtggcttccaccccctcagggcaaacttcacaggcatcgccccca
ccccgcaatgtgattgttttattgtaaaatacctaactttgaactttgaa
aaacaaacacttaagaatttatcagcagtgtctttgggggttccccatca
gaaggagtcttcggctcaaaatctcaagataagaagtctttattctaaca
gcagcctgtgtggaatgtgggtctcacatcctgtttccacgagtatccga
gctctttttttcgagacatacatttgataaaccattcgcattccagacaa
gaccactaactaactttcagtctggaggaatgaaagtgtgtgtgtgtgta
tgtatatgggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_6862844_6863605
seq2: B6Ng01-267P06.g_72_836

seq1  GAATTCCTGCCTGAGGATGGAAGTCAGAGGTGGGAAAAACACCGGCCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCCTGAGGATGGAAGTCAGAGGTGGGAAAAACACCGGCCCAG  50

seq1  CCCGGAGGGGAGGGGAGGGGCACCTACAGCACAGGGAAGGACAAGAGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGGAGGGGAGGGGAGGGGCACCTACAGCACAGGGAAGGACAAGAGAGA  100

seq1  GGTCCAGCCTCAGGACTGTGGAAGCAGAATCCTGACTTCTGAGAGCTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCCAGCCTCAGGACTGTGGAAGCAGAATCCTGACTTCTGAGAGCTGCC  150

seq1  CTCTGACATCTCTGAAGCACTGTGGGATATGTCTGCTCATCCTCACAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGACATCTCTGAAGCACTGTGGGATATGTCTGCTCATCCTCACAGAA  200

seq1  ACAAAAATAAATCTTAAAAGAAAGGAAAGGAGAAAGAAAAAGAAAATCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATAAATCTTAAAAGAAAGGAAAGGAGAAAGAAAAAGAAAATCAG  250

seq1  ATGTTTGCTTGATCTCAAACACACCCCTGAACTTCAAAGACTCATTCTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTGCTTGATCTCAAACACACCCCTGAACTTCAAAGACTCATTCTAC  300

seq1  TGAGGAAAAAAAAAAAAAAAAACTCCGCATGAACTGATTGGCTTATCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAAAAAAAAAAAAAAACTCCGCATGAACTGATTGGCTTATCAGC  350

seq1  TTGATTGCCAGTCAAGATGATTGATAGACTTATCACCTCTTTGGCCCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGCCAGTCAAGATGATTGATAGACTTATCACCTCTTTGGCCCTGC  400

seq1  TATCTGTGGCTTCCACCCCCTCAGGGCAAACTTCACAGGCATCGCCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTGGCTTCCACCCCCTCAGGGCAAACTTCACAGGCATCGCCCCCA  450

seq1  CCCCGCAATGTGATTGTTTTATTGTAAAATACCTAACTTTGAACTTTGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGCAATGTGATTGTTTTATTGTAAAATACCTAACTTTGAACTTTGAA  500

seq1  AAACAAACACTTAAGAATTTATCAGCAGTGTCTTTGGGGGTTCCCCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACACTTAAGAATTTATCAGCAGTGTCTTTGGGGGTTCCCCATCA  550

seq1  GAAGGAGTCTTCGGCTCAAAATCTCAAGATAAGAAGTCTTTATTCTAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGTCTTCGGCTCAAAATCTCAAGATAAGAAGTCTTTATTCTAACA  600

seq1  GCAGCCTGTGTGGAATGTGGGTCTCACATCCTGTTTCCACGAGTATCCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCCTGTGTGGAATGTGGGTCTCACATCCTGTTTCCACGAGTATCCGA  650

seq1  GCTC-TTATTTCGAGACATACA-TTGATAAACCATTCGCATTCCAGACAA  698
      |||| || |||||||||||||| |||||||||||||||||||||||||||
seq2  GCTCTTTTTTTCGAGACATACATTTGATAAACCATTCGCATTCCAGACAA  700

seq1  GACCACTAACTAAC-TTCAGTCTGGAGGAATGAAAGTGTGTGTGTGTGTA  747
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GACCACTAACTAACTTTCAGTCTGGAGGAATGAAAGTGTGTGTGTGTGTA  750

seq1  TGTATATGGGGGGTG  762
      ||||||||||||| |
seq2  TGTATATGGGGGGGG  765