BAC Information

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BAC

Clone NameB6Ng01-268H18
Chromosome7 (Build37)
Map Location 62,486,587 - 62,603,636
singlet/doubletdoublet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2, p
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268H18.bB6Ng01-268H18.g
ACCGA071327GA071328
length1,0731,025
definitionB6Ng01-268H18.b B6Ng01-268H18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,602,578 - 62,603,636)(62,486,587 - 62,487,623)
sequence
gaattcttcccatttctaggaagtctttcattcattgctgaaggtccgtt
gaattttataaattcatttcaatgattacttctctaatattttctggaca
caaaatgagaaaattgaaacatagtattaaaataaatgtatcattatgtg
tgtttgttgtgtatttgagaaagaagtagaagacataaaaaagacaaact
aatgcaactaagttaaatttcacataccttattttaaaaactaaacatag
aataaaaatggaaatgtaacaatgatgacacataatatttatctccaatt
atatgaagaatatatgaatattaaaaagataaaataactaattgaatact
aggggaacagaacttaggaagaaaatttaagaagagattattaatgtttt
tattttttatacatttacttatttagttgattaaaattttattttgcaat
ttagatgtgtataacttgcatattcattgttctcacttcccgcttccctt
ctactcttatctatactcttcacacattctctcatgcttacgtctatttg
gtttgtgattcacctagattaaaaagggttgtctttgtgaccatgggtat
ggacctatttgtttgagtctgatgatctaagcagatggcccacaactaat
gatagtgactcctcttctcacaaaaatctattgatagctaaaatttcaga
gtaaaggaaagggtcttgcgagccatttcacccatccttgatggaattta
tttatagggctggtcctatattgatccactgcaggcatctgaggttgatg
tgagttaatggttataataaccaatctagggactgtttgtcttgctacct
ttaaccctatcttctggttcttttgcatttcctagctctttttttttttt
ttttttgtattgttccctcagtcttatgggggttgatttaagttacttgg
ttctgggcttatttttctgcatatttggacagtgatgaagcctagcattc
tccataatcattgtaatgcagaattctctgataaggctggagctgccttt
gtctatggagttatatattatat

gaattcaccctttaccagtaagcaaagcacttttttaatgcctctgttct
aataactcaaagtgaagctagaatagccttactggctttctgataaagaa
tatagatagacacataggagtgattatttctgtttggttttttgttttgt
ttgttttgtttgtttgtatttgacaatatctctctgtgtagccctggtca
tcctggaactctctgtgtagaccagtttggtctccaacttagggattcac
ctgcctctgcctcctgagtgttgagattaaagatgttcactactataaaa
aaaaggaatatagatagaatataggatatagatatagaatatctcattag
gaatatagaaagaatttagaattcttttatttctaatctgttcctctttt
gcgggtatttctcatatttatgttatacttcaatttcttgaactgatgaa
gttaatatgcccatttcactccatcctctattctttactatagtatgtgt
tctcttatgttacttttaatgagttgagttcctcatgttgatgtatataa
ataaatggaattctttattaccaacatctttggaaaacaaaagaatacat
ttggattgtttttccaacttttgaaattgcttggttcattctgttttaaa
tatcaatatttttaaatcatgcgtttcactgcaaaggatgacctggcatt
ccaaatatgtgaaaaatgctttattagaaatgtagtaaaaactcttttaa
agaaatgcgctttgcttctggctgcatgagttcttcatattaatatttta
agtgggcagtatattttgaattttctatgcttcatagaaaaagagaattt
aaataaaaagtaaactgactaaaacaggaagataagtccagattttcggt
ttttttttttcttttttttgaattttaatactttatatattttttgagag
gatatttttttattacgtatttctcatacatttcaatgctatccaaagtc
cccacacccccccccactccctacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62602578_62603636
seq2: B6Ng01-268H18.b_55_1120 (reverse)

seq1  ATATATATATAT-ACT-CATAGACAAA-GCAGCTCCAGCCTTAATCAGAG  47
      ||||| |||||| ||| |||||||||| |||||||||||||| |||||||
seq2  ATATA-ATATATAACTCCATAGACAAAGGCAGCTCCAGCCTT-ATCAGAG  48

seq1  AATTCTGCATTACAATGATTATGGAGAATGCTAGGCTTCATCACTGTCC-  96
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AATTCTGCATTACAATGATTATGGAGAATGCTAGGCTTCATCACTGTCCA  98

seq1  AATATGCAG-AAAATAAGCCCAGAA-CAAGTAACTTAAATCAA-CCCCAT  143
      ||||||||| ||||||||||||||| ||||||||||||||||| ||||||
seq2  AATATGCAGAAAAATAAGCCCAGAACCAAGTAACTTAAATCAACCCCCAT  148

seq1  AAGACTGAGGGAACAATAC--AAAAAAAAAAAAAAAAGAGCTAGGAAATG  191
      |||||||||||||||||||  |||||||||||||||||||||||||||||
seq2  AAGACTGAGGGAACAATACAAAAAAAAAAAAAAAAAAGAGCTAGGAAATG  198

seq1  CAAAAGAACCAGAAGATAGGGTTAAAGGTAGCAAGACAAACAGTCCCTAG  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAACCAGAAGATAGGGTTAAAGGTAGCAAGACAAACAGTCCCTAG  248

seq1  ATTGGTTATTATAACCATTAACTCACATCAACCTCAGATGCCTGCAGTGG  291
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGTTATTATAACCATTAACTCACATCAACCTCAGATGCCTGCAGTGG  298

seq1  ATCAATATAGGACCAGCCCTATAAATAAATTCCATCAAGGATGGGTGAAA  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATATAGGACCAGCCCTATAAATAAATTCCATCAAGGATGGGTGAAA  348

seq1  TGGCTCGCAAGACCCTTTCCTTTACTCTGAAATTTTAGCTATCAATAGAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTCGCAAGACCCTTTCCTTTACTCTGAAATTTTAGCTATCAATAGAT  398

seq1  TTTTGTGAGAAGAGGAGTCACTATCATTAGTTGTGGGCCATCTGCTTAGA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTGAGAAGAGGAGTCACTATCATTAGTTGTGGGCCATCTGCTTAGA  448

seq1  TCATCAGACTCAAACAAATAGGTCCATACCCATGGTCACAAAGACAACCC  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCAGACTCAAACAAATAGGTCCATACCCATGGTCACAAAGACAACCC  498

seq1  TTTTTAATCTAGGTGAATCACAAACCAAATAGACGTAAGCATGAGAGAAT  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATCTAGGTGAATCACAAACCAAATAGACGTAAGCATGAGAGAAT  548

seq1  GTGTGAAGAGTATAGATAAGAGTAGAAGGGAAGCGGGAAGTGAGAACAAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAGAGTATAGATAAGAGTAGAAGGGAAGCGGGAAGTGAGAACAAT  598

seq1  GAATATGCAAGTTATACACATCTAAATTGCAAAATAAAATTTTAATCAAC  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATGCAAGTTATACACATCTAAATTGCAAAATAAAATTTTAATCAAC  648

seq1  TAAATAAGTAAATGTATAAAAAATAAAAACATTAATAATCTCTTCTTAAA  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAGTAAATGTATAAAAAATAAAAACATTAATAATCTCTTCTTAAA  698

seq1  TTTTCTTCCTAAGTTCTGTTCCCCTAGTATTCAATTAGTTATTTTATCTT  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTCCTAAGTTCTGTTCCCCTAGTATTCAATTAGTTATTTTATCTT  748

seq1  TTTAATATTCATATATTCTTCATATAATTGGAGATAAATATTATGTGTCA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTCATATATTCTTCATATAATTGGAGATAAATATTATGTGTCA  798

seq1  TCATTGTTACATTTCCATTTTTATTCTATGTTTAGTTTTTAAAATAAGGT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTACATTTCCATTTTTATTCTATGTTTAGTTTTTAAAATAAGGT  848

seq1  ATGTGAAATTTAACTTAGTTGCATTAGTTTGTCTTTTTTATGTCTTCTAC  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAAATTTAACTTAGTTGCATTAGTTTGTCTTTTTTATGTCTTCTAC  898

seq1  TTCTTTCTCAAATACACAACAAACACACATAATGATACATTTATTTTAAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTCAAATACACAACAAACACACATAATGATACATTTATTTTAAT  948

seq1  ACTATGTTTCAATTTTCTCATTTTGTGTCCAGAAAATATTAGAGAAGTAA  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGTTTCAATTTTCTCATTTTGTGTCCAGAAAATATTAGAGAAGTAA  998

seq1  TCATTGAAATGAATTTATAAAATTCAACGGACCTTCAGCAATGAATGAAA  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGAAATGAATTTATAAAATTCAACGGACCTTCAGCAATGAATGAAA  1048

seq1  GACTTCCTAGAAATGGGA  1059
      ||||||||||||||||||
seq2  GACTTCCTAGAAATGGGA  1066


seq1: chr7_62486587_62487623
seq2: B6Ng01-268H18.g_67_1091

seq1  GAATTCACCCTTTACCAGTAAGCAAAGCACTTTTTTAATGCCTCTGTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACCCTTTACCAGTAAGCAAAGCACTTTTTTAATGCCTCTGTTCT  50

seq1  AATAACTCAAAGTGAAGCTAGAATAGCCTTACTGGCTTTCTGATAAAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAACTCAAAGTGAAGCTAGAATAGCCTTACTGGCTTTCTGATAAAGAA  100

seq1  TATAGATAGACACATAGGAGTGATTATTTCTGTTTGGTTTTTTGTTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATAGACACATAGGAGTGATTATTTCTGTTTGGTTTTTTGTTTTGT  150

seq1  TTGTTTTGTTTGTTTGTATTTGACAATATCTCTCTGTGTAGCCCTGGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGTTTGTTTGTATTTGACAATATCTCTCTGTGTAGCCCTGGTCA  200

seq1  TCCTGGAACTCTCTGTGTAGACCAGTTTGGTCTCCAACTTAGGGATTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACTCTCTGTGTAGACCAGTTTGGTCTCCAACTTAGGGATTCAC  250

seq1  CTGCCTCTGCCTCCTGAGTGTTGAGATTAAAGATGTTCACTACTATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCTGCCTCCTGAGTGTTGAGATTAAAGATGTTCACTACTATAAAA  300

seq1  AAAAGGAATATAGATAGAATATAGGATATAGATATAGAATATCTCATTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGAATATAGATAGAATATAGGATATAGATATAGAATATCTCATTAG  350

seq1  GAATATAGAAAGAATTTAGAATTCTTTTATTTCTAATCTGTTCCTCTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGAAAGAATTTAGAATTCTTTTATTTCTAATCTGTTCCTCTTTT  400

seq1  GCGGGTATTTCTCATATTTATGTTATACTTCAATTTCTTGAACTGATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGGGTATTTCTCATATTTATGTTATACTTCAATTTCTTGAACTGATGAA  450

seq1  GTTAATATGCCCATTTCACTCCATCCTCTATTCTTTACTATAGTATGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATATGCCCATTTCACTCCATCCTCTATTCTTTACTATAGTATGTGT  500

seq1  TCTCTTATGTTACTTTTAATGAGTTGAGTTCCTCATGTTGATGTATATAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTATGTTACTTTTAATGAGTTGAGTTCCTCATGTTGATGTATATAA  550

seq1  ATAAATGGAATTCTTTATTACCAACATCTTTGGAAAACAAAAGAATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGAATTCTTTATTACCAACATCTTTGGAAAACAAAAGAATACAT  600

seq1  TTGGATTGTTTTTCCAACTTTTGAAATTGCTTGGTTCATTCTGTTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTGTTTTTCCAACTTTTGAAATTGCTTGGTTCATTCTGTTTTAAA  650

seq1  TATCAATATTTTTAAATCATGCGTTTCACTGCAAAGGATGACCTGGCATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATATTTTTAAATCATGCGTTTCACTGCAAAGGATGACCTGGCATT  700

seq1  CCAAATATGTGAAAAATGCTTTATTAGAAATGTAGTAAAAACTCTTTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAATATGTGAAAAATGCTTTATTAGAAATGTAGTAAAAACTCTTTTAA  750

seq1  AGAAATGCGCTTTGCTTCTGGCTGCATGAGTTCTTCATATTAATATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGCGCTTTGCTTCTGGCTGCATGAGTTCTTCATATTAATATTTTA  800

seq1  AGTGGGCAGTATATTTTGAATTTTCTATGCTTCATAGAAAAAGAGAATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGGCAGTATATTTTGAATTTTCTATGCTTCATAGAAAAAGAGAATTT  850

seq1  AAATAAAAAGTAAACTGACTAAAACAGGAAGATAAGTCCAGATTTTCGGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAAGTAAACTGACTAAAACAGGAAGATAAGTCCAGATTTTCGGT  900

seq1  TTTTTTTTTTCTTTTTTTTGAATTTTAATACTTTATATATTTTTTGAGAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTCTTTTTTTTGAATTTTAATACTTTATATATTTTTTGAGAG  950

seq1  GATAATTTTTTTATTACGTATTTTCCTCAATTACATTTCCAATGCTATCC  1000
      ||| |||||||||||||||||||  ||||  ||||||| |||||||||||
seq2  GAT-ATTTTTTTATTACGTATTT--CTCA--TACATTT-CAATGCTATCC  994

seq1  CAAAAGTCCCCCACACCCCCCCCCCCACTCCCCTACC  1037
        ||||||||   ||| |||||||||||| |||||||
seq2  --AAAGTCCC---CACACCCCCCCCCACT-CCCTACC  1025


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