BAC Information

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BAC

Clone NameB6Ng01-268N13
Chromosome7 (Build37)
Map Location 93,920,147 - 93,921,241
singlet/doubletsinglet
Overlap geneFolh1
Upstream geneEG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310, Olfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292
Downstream geneEG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4, Tyr, Grm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-268N13.bB6Ng01-268N13.g
ACCGA071599GA071600
length9801,098
definitionB6Ng01-268N13.b B6Ng01-268N13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttaactgaggaatactgaatggctgagaagaacctaaataaagg
ttcaacattcttaatcatcagggaaatgcaaatcaaaacaaccctgagac
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaagaggaacactcctccattgctggtg
ggactgcaagttggtacaaccactctggaaatcagtttgtcagttcctca
gaaaattggacatagttttcctggaagattcagcaatactattcctgggc
acatacccagaagatgctccaacatgtaataagaacacatgctccactat
gttcatagcagccttatttataacaaccagaaactggaaagaacccagat
gtccctcaacagaggaatggatacagcaaatgtggtacatttacgaaatg
gaaaactacacagctattaaaaacaatgaatttatgaaattcttagacaa
atggatggatcaggaggttatcatcttgaatgaggtaaccgaatcacaaa
agaacacacatgatatgcactcaatgataagtggatattagcccagaagc
tcagatcctttttaggagggggattaaaataatcatggaaagagttacag
agacaaagtgtgaatcagagcctgaaggagtagccatccagagacagccc
cacttgctgatcatcccataaacaaccaccaaatccagaaacaagtcaga
tgccaaaaagagcctgctaacaacagcctgatatagctttctcctgaggg
gctctaccagtgcctggcaaatacagaagtggattctcacagtcatccat
ttggataaagcacaagtccccatgaaggagctagagaaagtactcaggga
gcttaagggtactgagccccagaggaagatcatcatatgaactaacagta
ccctcatagttcttgctaatgactaatgac
gaattcaataaatacatggagatgatgcaactaaagtgaaatctttctgc
ttatctttttacttacctcatttccatcttcattaattattgagatatag
ttaggatgagttttatttggataggacagcaagacatcgtaatgggataa
ctcaaccaaatccaggccaaattctttccactggtcatgaatttgctttg
caagctcaaaattattttgtgttcctgccaagtgtggtgtccgtgtgaaa
ttgctggtgaaggaaaattgaaaatgtttaaacattacttttagtctgtc
tgcgttttcaataggcaccccaaaaaccctacatttttcatgcctataat
atataataaatgaagtaaatataagatgtggggacttttcatgaagaagt
ttaagcctaatgcctcttactcaatggggcactcctaaaagcaatagctc
tcatagattttaaatctattgtaattaacgtacacacacacacacacaca
cacacacacacacacacacacacacacacacacatatatatatatatata
tatatatatatatatattcctacagatatgaaacttttaaccatatgtga
atatttaatagtcttttatatcaaatcactctgtgttcattaggaaatcc
tatcagtagaggaattttttaaagacttttgacatatatattaacctgat
tttttgaaaacctataatgtgttctaggtgattagataatactaatccta
tatacatccacatattgtattttaactaaatataaatctaactttgtgtc
tatgattacgttttatgttcttgtactaaatgagaatcaaactagtgcct
tgtacatattcaggaatatagtttaggtctagcatgtgcaagggcccaat
aaattttacaatatattcatttatctcttttgctttacactcttttgaaa
aagaatagatttagttttagtgttttcagaacatctaatttcccaggttc
acccttatcactgcagtatcattatcttatctcatagatgagaatagaaa
gcttggtcagttcattaggtcactcaagtaggttccctccatatgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93920147_93921241
seq2: B6Ng01-268N13.g_66_1163

seq1  GAATTCAATAAATACATGGAGATGATGCAACTAAAGTGAAATCTTTCTGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAATACATGGAGATGATGCAACTAAAGTGAAATCTTTCTGC  50

seq1  TTATCTTTTTACTTACCTCATTTCCATCTTCATTAATTATTGAGATATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTTTACTTACCTCATTTCCATCTTCATTAATTATTGAGATATAG  100

seq1  TTAGGATGAGTTTTATTTGGATAGGACAGCAAGACATCGTAATGGGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATGAGTTTTATTTGGATAGGACAGCAAGACATCGTAATGGGATAA  150

seq1  CTCAACCAAATCCAGGCCAAATTCTTTCCACTGGTCATGAATTTGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAACCAAATCCAGGCCAAATTCTTTCCACTGGTCATGAATTTGCTTTG  200

seq1  CAAGCTCAAAATTATTTTGTGTTCCTGCCAAGTGTGGTGTCCGTGTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCAAAATTATTTTGTGTTCCTGCCAAGTGTGGTGTCCGTGTGAAA  250

seq1  TTGCTGGTGAAGGAAAATTGAAAATGTTTAAACATTACTTTTAGTCTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGTGAAGGAAAATTGAAAATGTTTAAACATTACTTTTAGTCTGTC  300

seq1  TGCGTTTTCAATAGGCACCCCAAAAACCCTACATTTTTCATGCCTATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTTTTCAATAGGCACCCCAAAAACCCTACATTTTTCATGCCTATAAT  350

seq1  ATATAATAAATGAAGTAAATATAAGATGTGGGGACTTTTCATGAAGAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATAAATGAAGTAAATATAAGATGTGGGGACTTTTCATGAAGAAGT  400

seq1  TTAAGCCTAATGCCTCTTACTCAATGGGGCACTCCTAAAAGCAATAGCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTAATGCCTCTTACTCAATGGGGCACTCCTAAAAGCAATAGCTC  450

seq1  TCATAGATTTTAAATCTATTGTAATTAACGTACACACACACACACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGATTTTAAATCTATTGTAATTAACGTACACACACACACACACACA  500

seq1  CACACACACACACACACACACACACACACACACATATATATATATATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACATATATATATATATATA  550

seq1  TATATATATATATATATTCCTACAGATATGAAACTTTTAACCATATGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATTCCTACAGATATGAAACTTTTAACCATATGTGA  600

seq1  ATATTTAATAGTCTTTTATATCAAATCACTCTGTGTTCATTAGGAAATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTAATAGTCTTTTATATCAAATCACTCTGTGTTCATTAGGAAATCC  650

seq1  TATCAGTAGAGGAATTTTTTAAAGACTTTTGACATATATATTAACCTGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAGTAGAGGAATTTTTTAAAGACTTTTGACATATATATTAACCTGAT  700

seq1  TTTTTGAAAACCTATAATGTGTTCTAGGTGATTAGATAATACTAATCCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGAAAACCTATAATGTGTTCTAGGTGATTAGATAATACTAATCCTA  750

seq1  TATACATCCACATATTGTATTTTAACTAAATATAAATCTAACTTTGTGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATCCACATATTGTATTTTAACTAAATATAAATCTAACTTTGTGTC  800

seq1  TATGATTACGTTTTATGTTCTTGTACT-AATGAGAATCAAACTAGTGCCT  849
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TATGATTACGTTTTATGTTCTTGTACTAAATGAGAATCAAACTAGTGCCT  850

seq1  TGTACATATTCAGGAATATAGTTTAGGTCTAGCATGTGCAAGGG-CCAAT  898
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGTACATATTCAGGAATATAGTTTAGGTCTAGCATGTGCAAGGGCCCAAT  900

seq1  -AATTTTACAATATATTCATTTATCTCTTTTGCTTTACACTCTTTTG-AA  946
       |||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATTTTACAATATATTCATTTATCTCTTTTGCTTTACACTCTTTTGAAA  950

seq1  AAGAATAGAATTAGTTTTTAGTGTTTTCAGAACATCTAA-TTCCCAGGTT  995
      ||||||||| |||| |||||||||||||||||||||||| ||||||||||
seq2  AAGAATAGATTTAG-TTTTAGTGTTTTCAGAACATCTAATTTCCCAGGTT  999

seq1  CACCCTTATCACTGCAGTATCATTATCCTTATCTCATAGATGAGAATAG-  1044
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  CACCCTTATCACTGCAGTATCATTAT-CTTATCTCATAGATGAGAATAGA  1048

seq1  AAGCTTGGTCAGTTTCATTA-GTCACTCAAAGTTAGTTCCCTCATAATGA  1093
      |||||||||||| ||||||| ||||||| ||||  ||||||||   ||||
seq2  AAGCTTGGTCAG-TTCATTAGGTCACTC-AAGTAGGTTCCCTCCATATGA  1096

seq1  GC  1095
      ||
seq2  GC  1098