BAC Information

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BAC

Clone NameB6Ng01-269J10
Chromosome7 (Build37)
Map Location 76,314,488 - 76,491,703
singlet/doubletdoublet
Overlap geneLOC384741
Upstream geneIgf1r, C330024D12Rik, EG434197, LOC100041800, EG384639, Arrdc4
Downstream geneEG665410
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269J10.bB6Ng01-269J10.g
ACCGA072143GA072144
length1,1531,149
definitionB6Ng01-269J10.b B6Ng01-269J10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,490,541 - 76,491,703)(76,314,488 - 76,315,656)
sequence
gaattcactatgtagactagactggcttcaaactcagaggtccaccttgc
ccccaaaacactgggactaaaggcatgcttgaatatgctgagataatttt
tttttcttgaaacataagcaaacaaaaactcacaaaaatacaactaaaat
actttgaagtccatcttatgtttgtaaattactcctgaatatgagtcctg
ccttggagtgtgtgatatattcactcctgaacatgagtcctgccttggag
tgtgtgatatattcactcctgaacatgagtcctgccttggagtgtgtgat
atattcactcctgaacatgagtcctgccttggagtgtgtgatatattcac
tcctgaatatgagtcgagtcctgccttggagtgtgtgatatattcactcc
tgaatatgagtcctgccttggagtgtgtgatatattcactcctgaatatg
agtcctgcctttgagtgtgtgatatattcactcctgaatatgagtcctgc
cttggggtgtgtgatatattcagtgttattccattggtgaaaactggttt
tctttttcccagcaaagtataaatgatagttcaattgttaacctttactc
taatggctaattttacattcattccttcatcgactcactcatttcattcg
ttttctaaaatacatcaaaataaaatacatgaagataaaacaaaaatagc
tcatcaaacctggacaagacagaaggaaatgagcccaatgggagagaata
gaagtcacacacattgggacactcaggatttctataaaaatattaaccta
aaagctacactatcaacacagaggacctgacgcagcatgaaaaccagaga
agggggacactaaaactttaatttttaagagataatcccctttatcttag
agtggaagaaccgtgaatttagaaacatgagacaacctgtagcaaagaca
gattcatagagaaacacagttctagaggataaacaaacatcaaactcata
gaatcctaggggtttcttttaaaagagaataaggaaaacttcacttttag
aatgaaaatagggagagagtgataccacttgtcagcgccacagcaccagc
agtcattgagaatgcttctgatactgaagggacacgatcagctagttcct
tga

gaattctccatttagctctgtaccccacattttaatagggtggagtctac
cttcttgagttctttgtatattttggatattatccctctattagatatag
ggttagtaaagatcttttcccaatctgtgggttgctgttctgtcctatag
aaaaacacaaattaatccattcttatctccttgtagaaagctcaagtcca
agtggatcaaggacctctacataaaaccagatacactgaatctaatagaa
gagaaagtgggaaagagcctcaaatacatgggcacaggggaaaccttcct
gaacagaacaccattgacttatgctttaggatcaacaatcgacaaatggg
acctcataaaattgaaaagcttctgtaaggccaaggacactgtcaatagg
ataaaattcattcttgaagccgaaagggatcgaatcagtgtgtacgcaaa
tcattttaaaagttaaacagatgcagtctggctctactgaaaaacacaca
cacacacacacacacacacacacacacacacacacacacactgaaagaaa
tagagaccaagaagttaagaggagggagcaagggaaagggggaaatgata
ctatattttaattaaaaatgaaaatatatttttaaaaaagacctgtttta
tggcatttttagaaagaacagatgcagaaacaagcagtgcaggtagggta
ggatatccttgtaaattgagcatgaggaagtggtggaagagagatgatgc
caaccattgatgttctcattctgttttgttgcccccaaatgggcacccta
cttaatacaatgcaaaaatgcatggcaaagtcactgtcatcctagtatca
tttgtaaaatcattgcgaaaagaaaaaaaaagggccaattaaaaaatact
taggtatatacttggtccttaatcatcatgaggttaaatcttatactctt
actgaaatttgcaaacatctggaatggaaagcatggagcatggaactgac
ttgcaaaacttaggacttccacagaagcagtgcccaagtgaaccatctac
tgctgctctcatgtctgcactgacgaactgcagcctatactgtctagccg
aactgcaaatacgcaacatactgctctgagaaagcaattccaatgtata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_76490541_76491703
seq2: B6Ng01-269J10.b_43_1195 (reverse)

seq1  TCAAGG-ACTAGCCTTGATCGTGTTCCCTTTCAGTAACCAGAAGCATCCT  49
      |||||| ||||||  |||||||||  || |||||| | ||||||||| ||
seq2  TCAAGGAACTAGC--TGATCGTGT--CCCTTCAGT-ATCAGAAGCATTCT  45

seq1  CAATGGACTGCT-GTGCTGT-GCGCTGACAAGTGTTATTCACTCTTCTCC  97
      |||| ||||||| ||||||| ||||||||||||| || |||||| |||||
seq2  CAAT-GACTGCTGGTGCTGTGGCGCTGACAAGTGGTA-TCACTC-TCTCC  92

seq1  CTATTTTCCATTCTAAAAGTGAAGTTTTCCTTTATTCTCTTTTAAAAGAA  147
      ||||||| |||||||||||||||||||||| |||||||||||||||||||
seq2  CTATTTT-CATTCTAAAAGTGAAGTTTTCC-TTATTCTCTTTTAAAAGAA  140

seq1  ACCCCTAGGATTCTATTGAGTTTGATGTTTGTTTTATCCTCTAGAACTGT  197
      ||||||||||||||| ||||||||||||||| ||||||||||||||||||
seq2  ACCCCTAGGATTCTA-TGAGTTTGATGTTTG-TTTATCCTCTAGAACTGT  188

seq1  GTTTCTCTATGAATCTGTCTTTGCTACAGGTTGTCTCATGTTTCTAAATT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTCTATGAATCTGTCTTTGCTACAGGTTGTCTCATGTTTCTAAATT  238

seq1  CACGGTTCTTCCACTCTAAGATAAAGGGGATTATCTCTTAAAAATTAAAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTTCTTCCACTCTAAGATAAAGGGGATTATCTCTTAAAAATTAAAG  288

seq1  TTTTAGTGTCCCCCTTCTCTGGTTTTCATGCCTGCGTCAGGTCCTCTGTG  347
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TTTTAGTGTCCCCCTTCTCTGGTTTTCATG-CTGCGTCAGGTCCTCTGTG  337

seq1  TTGATAGTGTAGCTTTTAGGTTAATATTTTTATAGAAATCCTGAGTGTCC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAGTGTAGCTTTTAGGTTAATATTTTTATAGAAATCCTGAGTGTCC  387

seq1  CAATGTGTGTGACTTCTATTCTCTCCCATTGGGCTCATTTCCTTCTGTCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTGTGACTTCTATTCTCTCCCATTGGGCTCATTTCCTTCTGTCT  437

seq1  TGTCCAGGTTTGATGAGCTATTTTTGTTTTATCTTCATGTATTTTATTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCAGGTTTGATGAGCTATTTTTGTTTTATCTTCATGTATTTTATTTT  487

seq1  GATGTATTTTAGAAAACGAATGAAATGAGTGAGTCGATGAAGGAATGAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATTTTAGAAAACGAATGAAATGAGTGAGTCGATGAAGGAATGAAT  537

seq1  GTAAAATTAGCCATTAGAGTAAAGGTTAACAATTGAACTATCATTTATAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATTAGCCATTAGAGTAAAGGTTAACAATTGAACTATCATTTATAC  587

seq1  TTTGCTGGGAAAAAGAAAACCAGTTTTCACCAATGGAATAACACTGAATA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGGAAAAAGAAAACCAGTTTTCACCAATGGAATAACACTGAATA  637

seq1  TATCACACACCCCAAGGCAGGACTCATATTCAGGAGTGAATATATCACAC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCACACACCCCAAGGCAGGACTCATATTCAGGAGTGAATATATCACAC  687

seq1  ACTCAAAGGCAGGACTCATATTCAGGAGTGAATATATCACACACTCCAAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAGGCAGGACTCATATTCAGGAGTGAATATATCACACACTCCAAG  737

seq1  GCAGGACTCATATTCAGGAGTGAATATATCACACACTCCAAGGCAGGACT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGACTCATATTCAGGAGTGAATATATCACACACTCCAAGGCAGGACT  787

seq1  CGACTCATATTCAGGAGTGAATATATCACACACTCCAAGGCAGGACTCAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACTCATATTCAGGAGTGAATATATCACACACTCCAAGGCAGGACTCAT  837

seq1  GTTCAGGAGTGAATATATCACACACTCCAAGGCAGGACTCATGTTCAGGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAGGAGTGAATATATCACACACTCCAAGGCAGGACTCATGTTCAGGA  887

seq1  GTGAATATATCACACACTCCAAGGCAGGACTCATGTTCAGGAGTGAATAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATATCACACACTCCAAGGCAGGACTCATGTTCAGGAGTGAATAT  937

seq1  ATCACACACTCCAAGGCAGGACTCATATTCAGGAGTAATTTACAAACATA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACACTCCAAGGCAGGACTCATATTCAGGAGTAATTTACAAACATA  987

seq1  AGATGGACTTCAAAGTATTTTAGTTGTATTTTTGTGAGTTTTTGTTTGCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGACTTCAAAGTATTTTAGTTGTATTTTTGTGAGTTTTTGTTTGCT  1037

seq1  TATGTTTCAAGAAAAAAAAATTATCTCAGCATATTCAAGCATGCCTTTAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTTCAAGAAAAAAAAATTATCTCAGCATATTCAAGCATGCCTTTAG  1087

seq1  TCCCAGTGTTTTGGGGGCAAGGTGGACCTCTGAGTTTGAAGCCAGTCTAG  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTGTTTTGGGGGCAAGGTGGACCTCTGAGTTTGAAGCCAGTCTAG  1137

seq1  TCTACATAGTGAATTC  1163
      ||||||||||||||||
seq2  TCTACATAGTGAATTC  1153


seq1: chr7_76314488_76315656
seq2: B6Ng01-269J10.g_63_1211

seq1  GAATTCTCCATTTAGCTCTGTACCCCACATTTTAATAGGGTGGAGTCTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCATTTAGCTCTGTACCCCACATTTTAATAGGGTGGAGTCTAC  50

seq1  CTTCTTGAGTTCTTTGTATATTTTGGATATTATCCCTCTATTAGATATAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGAGTTCTTTGTATATTTTGGATATTATCCCTCTATTAGATATAG  100

seq1  GGTTAGTAAAGATCTTTTCCCAATCTGTGGGTTGCTGTTCTGTCCTATAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAGTAAAGATCTTTTCCCAATCTGTGGGTTGCTGTTCTGTCCTATAG  150

seq1  AAAAACACAAATTAATCCATTCTTATCTCCTTGTAGAAAGCTCAAGTCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACACAAATTAATCCATTCTTATCTCCTTGTAGAAAGCTCAAGTCCA  200

seq1  AGTGGATCAAGGACCTCTACATAAAACCAGATACACTGAATCTAATAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGATCAAGGACCTCTACATAAAACCAGATACACTGAATCTAATAGAA  250

seq1  GAGAAAGTGGGAAAGAGCCTCAAATACATGGGCACAGGGGAAACCTTCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAGTGGGAAAGAGCCTCAAATACATGGGCACAGGGGAAACCTTCCT  300

seq1  GAACAGAACACCATTGACTTATGCTTTAGGATCAACAATCGACAAATGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAACACCATTGACTTATGCTTTAGGATCAACAATCGACAAATGGG  350

seq1  ACCTCATAAAATTGAAAAGCTTCTGTAAGGCCAAGGACACTGTCAATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCATAAAATTGAAAAGCTTCTGTAAGGCCAAGGACACTGTCAATAGG  400

seq1  ATAAAATTCATTCTTGAAGCCGAAAGGGATCGAATCAGTGTGTACGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATTCATTCTTGAAGCCGAAAGGGATCGAATCAGTGTGTACGCAAA  450

seq1  TCATTTTAAAAGTTAAACAGATGCAGTCTGGCTCTACTGAAAAACACACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAAAAGTTAAACAGATGCAGTCTGGCTCTACTGAAAAACACACA  500

seq1  CACACACACACACACACACACACACACACACACACACACACTGAAAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACACTGAAAGAAA  550

seq1  TAGAGACCAAGAAGTTAAGAGGAGGGAGCAAGGGAAAGGGGGAAATGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGACCAAGAAGTTAAGAGGAGGGAGCAAGGGAAAGGGGGAAATGATA  600

seq1  CTATATTTTAATTAAAAATGAAAATATATTTTTAAAAAAGACCTGTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATTTTAATTAAAAATGAAAATATATTTTTAAAAAAGACCTGTTTTA  650

seq1  TGGCATTTTTAGAAAGAACAGATGCAGAAACAAGCAGTGCAGGTAGGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTTTAGAAAGAACAGATGCAGAAACAAGCAGTGCAGGTAGGGTA  700

seq1  GGATATCCTTGTAAATTGAGCATGAGGAAGTGGTGGAAGAGAGATGATGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCCTTGTAAATTGAGCATGAGGAAGTGGTGGAAGAGAGATGATGC  750

seq1  CAACCATTGATGTTCTCATTCTGTTTTGTTGCCCCCAAATGGGCACCCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCATTGATGTTCTCATTCTGTTTTGTTGCCCCCAAATGGGCACCCTA  800

seq1  CTTAATACAATGCAAAAATGCATGGCAAAGTCACTGTCATCCTAGTATCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATACAATGCAAAAATGCATGGCAAAGTCACTGTCATCCTAGTATCA  850

seq1  TTTGTAAAATCATTGCGAAAAGAAAAAAAAAAGGCCAATT-AAAAATACT  899
      ||||||||||||||||||||||||||||||| |||||||| |||||||||
seq2  TTTGTAAAATCATTGCGAAAAGAAAAAAAAAGGGCCAATTAAAAAATACT  900

seq1  TAGGTATATACTTGGTCCTTAATCATCATGAGGTTAAATCTTATACTCTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTATATACTTGGTCCTTAATCATCATGAGGTTAAATCTTATACTCTT  950

seq1  ACTGAAATTTGCAAACATCTGGAATGGAAAGCATGGAGCATGGAACTGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ACTGAAATTTGCAAACATCTGGAATGGAAAGCATGGAGCATGGAACTGA-  999

seq1  CTTGCAAACATTAGGAC-TCCACAG-AGCAGTGCCC-AGTGAACCATCTA  1046
      ||||||||  ||||||| ||||||| |||||||||| |||||||||||||
seq2  CTTGCAAAACTTAGGACTTCCACAGAAGCAGTGCCCAAGTGAACCATCTA  1049

seq1  CTGCTGCTTCTCATTGTCCTGCAGCTGACCGGGAACTGCAGCTCATCACT  1096
      ||||||| ||||| ||| ||||| |||||   ||||||||||  || |||
seq2  CTGCTGC-TCTCA-TGT-CTGCA-CTGAC---GAACTGCAGCCTAT-ACT  1091

seq1  G-CTAGCCAGAACTGCCAAAGAACAGCACACCACATACTGCCACCCCTG-  1144
      | |||||| ||||||| ||        || | ||||||||    | ||| 
seq2  GTCTAGCC-GAACTGCAAA-------TACGCAACATACTG----CTCTGA  1129

seq1  GAAAGAAGCCAAATTCCAATGTATA  1169
      |||||      ||||||||||||||
seq2  GAAAG-----CAATTCCAATGTATA  1149


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