BAC Information

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BAC

Clone NameB6Ng01-270B20
Chromosome7 (Build37)
Map Location 62,176,760 - 62,177,895
singlet/doubletsinglet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B20.bB6Ng01-270B20.g
ACCGA072541GA072542
length1,1361,159
definitionB6Ng01-270B20.b B6Ng01-270B20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctacatactagaagtagagttccaactcccccaagttatcctctg
accaattcaggcatatcatgagatgcatatcccctcacataatgtcttag
tcagtgttcggtttctatgaggaggcatcataaccataacaactcttata
aaggagatcaattagctgtgactgggttacagtttcagattcagtccatt
accagtatgacaggaagcatggtggcacacaggcagacatgatgctggag
aaggaactgagagatctacacctggatctgataaagcagcaagaggacag
agaaagacccaaggcctcgcttaggcttctgaaacctcaaaacccagcct
cagtgacacacttcctccaacatgaccacacgtcctagtgacactatctg
gataaagaattcaaatctatgaggctatgagggccattcttatttaagtt
actacatgtaaggaaatgtgaaaacgttagattaaccacttcaagttcta
tgctttcttaaatcactagtgtcaaaacatttactgctcattattccatt
gaaaataaggtagactctgctagttctcagccgatgctgtctgttctcac
atacacttccaatcccacatacctaggcctcattattttttataataatg
taaattgggaaacaataatggcaaagtttcccatagtccaagcaaaaaat
agtaaaaaagtgaaatgtaataactacaaaatcaccattttattatgctc
tgtcacttttcttacatggattaaggtaccttattttaggtagctttaat
aaactgaaagaaatggaaatatttgtatatgagagagaggggaggaaggt
agagacacacagagatatatacttgatgccaagagccatcaagggaggag
ttaaaaactagcagtgatctttctgagatcattctgccatggactgtgaa
agttaatgatgcatttgctactttaggcaaggccaaggagatttcatctg
aggaaagattcctgccattaatatgctttcctgttatatgaaatatatat
atatatatatacatccttaggcattagcacatactctcaaggcagatctc
ctgcagaactatgaggatgtactgttcttgaattga
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacacttcttcattgttggtg
ggattgcaggcttgtacaaccactctggaaatccgtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctgggc
atatatccagaagatgtcccaacctgtaaaaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgtccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagagga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatttaaacgctgacaccattccatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcttgtgagactatgcccggggccctagcaa
acacagaagtggatgctctcagtaagctattggatggatcacaggctccc
aatggaggagctagagaaagtaccaaagagctaaagggatctgcacctat
agtgacacactatgactacagtatccgatctctgactctagctcatatgt
atcaaaggatgactagtcgtcatcactgaagagagtcaatgacatgccaa
ctacattgccaagtaggataacgtcagtctaataattggattgaatgtgc
attagagcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62176760_62177895
seq2: B6Ng01-270B20.b_43_1178 (reverse)

seq1  TCAATACAAG-ACAGTACATCTTCATAGTTCTGCA-GAGATCTG-CTTGA  47
      ||||| |||| |||||||||| ||||||||||||| |||||||| |||||
seq2  TCAATTCAAGAACAGTACATCCTCATAGTTCTGCAGGAGATCTGCCTTGA  50

seq1  GAGTATGTGCTAATGCCTAGGGATTGTTATATATATATATATATATTTCA  97
      ||||||||||||||||||| ||||   |||||||||||||||||||||||
seq2  GAGTATGTGCTAATGCCTAAGGAT--GTATATATATATATATATATTTCA  98

seq1  TAATAACAGGAAAGCATATTAATGGCAGGAATCTTTCCTCAGATGAAATC  147
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-ATAACAGGAAAGCATATTAATGGCAGGAATCTTTCCTCAGATGAAATC  147

seq1  TCCTTGGCCTTGCCTAAAGTAGCAAATGCATCATTAACTTTCACAGTCCA  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGCCTTGCCTAAAGTAGCAAATGCATCATTAACTTTCACAGTCCA  197

seq1  TGGCAGAATGATCTCAGAAAGATCACCTGCTAGTTTTTAACTCCT-CCTT  246
      ||||||||||||||||||||||||| ||||||||||||||||||| ||||
seq2  TGGCAGAATGATCTCAGAAAGATCA-CTGCTAGTTTTTAACTCCTCCCTT  246

seq1  GATGGCTCTTGGCATCAAGTATATATCTCTGTGTGTCTCTACCTTCCTCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCTCTTGGCATCAAGTATATATCTCTGTGTGTCTCTACCTTCCTCC  296

seq1  CCTCTCTCTCATATACAAATATTTCCATTTCTTTCAGTTTATTAAAGCTA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCTCTCATATACAAATATTTCCATTTCTTTCAGTTTATTAAAGCTA  346

seq1  CCTAAAATAAGGTACCTTAATCCATGTAAGAAAAGTGACAGAGCATAATA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAATAAGGTACCTTAATCCATGTAAGAAAAGTGACAGAGCATAATA  396

seq1  AAATGGTGATTTTGTAGTTATTACATTTCACTTTTTTACTATTTTTTGCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGTGATTTTGTAGTTATTACATTTCACTTTTTTACTATTTTTTGCT  446

seq1  TGGACTATGGGAAACTTTGCCATTATTGTTTCCCAATTTACATTATTATA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATGGGAAACTTTGCCATTATTGTTTCCCAATTTACATTATTATA  496

seq1  AAAAATAATGAGGCCTAGGTATGTGGGATTGGAAGTGTATGTGAGAACAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAATGAGGCCTAGGTATGTGGGATTGGAAGTGTATGTGAGAACAG  546

seq1  ACAGCATCGGCTGAGAACTAGCAGAGTCTACCTTATTTTCAATGGAATAA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCGGCTGAGAACTAGCAGAGTCTACCTTATTTTCAATGGAATAA  596

seq1  TGAGCAGTAAATGTTTTGACACTAGTGATTTAAGAAAGCATAGAACTTGA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCAGTAAATGTTTTGACACTAGTGATTTAAGAAAGCATAGAACTTGA  646

seq1  AGTGGTTAATCTAACGTTTTCACATTTCCTTACATGTAGTAACTTAAATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTTAATCTAACGTTTTCACATTTCCTTACATGTAGTAACTTAAATA  696

seq1  AGAATGGCCCTCATAGCCTCATAGATTTGAATTCTTTATCCAGATAGTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGGCCCTCATAGCCTCATAGATTTGAATTCTTTATCCAGATAGTGT  746

seq1  CACTAGGACGTGTGGTCATGTTGGAGGAAGTGTGTCACTGAGGCTGGGTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGACGTGTGGTCATGTTGGAGGAAGTGTGTCACTGAGGCTGGGTT  796

seq1  TTGAGGTTTCAGAAGCCTAAGCGAGGCCTTGGGTCTTTCTCTGTCCTCTT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGTTTCAGAAGCCTAAGCGAGGCCTTGGGTCTTTCTCTGTCCTCTT  846

seq1  GCTGCTTTATCAGATCCAGGTGTAGATCTCTCAGTTCCTTCTCCAGCATC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTTATCAGATCCAGGTGTAGATCTCTCAGTTCCTTCTCCAGCATC  896

seq1  ATGTCTGCCTGTGTGCCACCATGCTTCCTGTCATACTGGTAATGGACTGA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCTGCCTGTGTGCCACCATGCTTCCTGTCATACTGGTAATGGACTGA  946

seq1  ATCTGAAACTGTAACCCAGTCACAGCTAATTGATCTCCTTTATAAGAGTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAACTGTAACCCAGTCACAGCTAATTGATCTCCTTTATAAGAGTT  996

seq1  GTTATGGTTATGATGCCTCCTCATAGAAACCGAACACTGACTAAGACATT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGGTTATGATGCCTCCTCATAGAAACCGAACACTGACTAAGACATT  1046

seq1  ATGTGAGGGGATATGCATCTCATGATATGCCTGAATTGGTCAGAGGATAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAGGGGATATGCATCTCATGATATGCCTGAATTGGTCAGAGGATAA  1096

seq1  CTTGGGGGAGTTGGAACTCTACTTCTAGTATGTAGAATTC  1136
      ||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGGAGTTGGAACTCTACTTCTAGTATGTAGAATTC  1136