BAC Information

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BAC

Clone NameB6Ng01-270G15
Chromosome7 (Build37)
Map Location 147,240,271 - 147,241,147
singlet/doubletsinglet
Overlap genenone
Upstream geneDpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2, Inpp5a, Nkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3
Downstream geneDrd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531, Olfr532, Olfr533, Olfr534-ps1, Olfr535, Olfr536, Olfr537-ps1, Olfr1523-ps1, Olfr538, Olfr1553-ps1, Olfr46, Olfr61, Olfr53, Olfr539, GA_x5J8B7W3EKE-4574231-4574913, Olfr45, Olfr541, GA_x5J8B7W3EKE-4522784-4521912, Cyp2e1, Syce1, LOC100043529, BC066028, 1190003J15Rik, Scgb1c1, Odf3, Bet1l, Ric8, Sirt3, Psmd13, LOC100043546, Cox8b, Nlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270G15.bB6Ng01-270G15.g
ACCGA072759GA072760
length3971,112
definitionB6Ng01-270G15.b B6Ng01-270G15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
cattttctataaaacaggtggaaatcttccccaaatctcagccccagagc
taagtaacaggacaccaagtgggtctatgatgtactagcttggcttttgc
aaagaacagtacataacactatagataaatgtcctttaatggtgtgtgtg
agagagagaggtgggggaggggagttggaggagctatgggataagttcgt
ctgtcacaggcgtcaaaccaaggcctgtcctgatcccatcccctcttccc
tttaaaggaagttctattttcatatctttttttttttttttttttttttt
gtattttgtaaaggcatttgtactggaataatgatattggaaaattagtt
gaaaaatatcataaactagctttattttaatttttaacattctgcca
gaattcctagtcccaaaaggtgtgaattgcaaatagctccttggttaggc
atgctaatttaagtcgacttttccttttcggtgctgggatttttgtctgg
tttgaacctgtaccagtcttgtgcatgctgtcagagcttctgtgagtgca
tatgtgcatcagtctggttgtgtctggaagacactgttttcttggaggca
tccaatacttctggctcttacagtcttcttgttgcctcttctgcatatat
ccctgagccttgaagagagggatttgataaaaggattctatttaaggctt
agtgttccaaaaatccctctctgcacagtgtctaattgtggatctctttg
ttaattaacatcttctggaagaagcagcttctccgacgagggctgagtga
tgttcttttctgtgagtatagcaatatgtcaagaggaggcactgtgttct
tatgttcctttagcagagtaatactagtgggtctccccctaggcatatgt
cctatccagtctcaggttcttggtcacattagcagtgccatatgtgagtt
ttattttatggaataggccttaaatccaatcaaaaagtgtttgattattc
ccataacaattgtgccgctattgcacatttggtttggggagacaagttct
ctctacgtaggccatgatgaccttgaattcatagtgctaaacttgtcttt
gcctcgtgagtccttagattaaagacatgaactgctatgcccaggtcctc
atttactcttttaagaacttagtttactactattgtgtgtatgattggga
attagcacttgccagggcatagagatggagggcagaggaggattttgtag
tcagttctttccttccatctctgtatgtggtccagggatcaaccctttgg
ttgtcagtgcctttatcctctgaaccttcttgccacattaccctccctgc
ccccatccccattcatttcttttaaatttttttcagtttattttataaaa
catttttagctttgctttttttgtgtttaacacactctataccggagtag
atacaacatagattttacagtcgcagcacgggcctctacactgaatttct
cggtctggtctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_147240271_147241147
seq2: B6Ng01-270G15.g_309_1175

seq1  TATATCCCTGAGCCTTGAAGAGAGGGATTTGATAAAAGGATTCTATTTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATCCCTGAGCCTTGAAGAGAGGGATTTGATAAAAGGATTCTATTTAA  50

seq1  GGCTTAGTGTTCCAAAAATCCCTCTCTGCACAGTGTCTAATTGTGGATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGTGTTCCAAAAATCCCTCTCTGCACAGTGTCTAATTGTGGATCT  100

seq1  CTTTGTTAATTAACATCTTCTGGAAGAAGCAGCTTCTCCGACGAGGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTTAATTAACATCTTCTGGAAGAAGCAGCTTCTCCGACGAGGGCTG  150

seq1  AGTGATGTTCTTTTCTGTGAGTATAGCAATATGTCAAGAGGAGGCACTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTTCTTTTCTGTGAGTATAGCAATATGTCAAGAGGAGGCACTGT  200

seq1  GTTCTTATGTTCCTTTAGCAGAGTAATACTAGTGGGTCTCCCCCTAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTATGTTCCTTTAGCAGAGTAATACTAGTGGGTCTCCCCCTAGGCA  250

seq1  TATGTCCTATCCAGTCTCAGGTTCTTGGTCACATTAGCAGTGCCATATGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCCTATCCAGTCTCAGGTTCTTGGTCACATTAGCAGTGCCATATGT  300

seq1  GAGTTTTATTTTATGGAATAGGCCTTAAATCCAATCAAAAAGTGTTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTTTATTTTATGGAATAGGCCTTAAATCCAATCAAAAAGTGTTTGAT  350

seq1  TATTCCCATAACAATTGTGCCGCTATTGCACATTTGGTTTGGGGAGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCCATAACAATTGTGCCGCTATTGCACATTTGGTTTGGGGAGACAA  400

seq1  GTTCTCTCTACGTAGGCCATGATGACCTTGAATTCATAGTGCTAAACTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTCTCTACGTAGGCCATGATGACCTTGAATTCATAGTGCTAAACTTG  450

seq1  TCTTTGCCTCGTGAGTCCTTAGATTAAAGACATGAACTGCTATGCCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCTCGTGAGTCCTTAGATTAAAGACATGAACTGCTATGCCCAGG  500

seq1  TCCTCATTTACTCTTTTAAGAACTTAGTTTACTACTATTGTGTGTATGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTTACTCTTTTAAGAACTTAGTTTACTACTATTGTGTGTATGAT  550

seq1  TGGGAATTAGCACTTGCCAGGGCATAGAGATGGAGGGCAGAGGAGGATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAATTAGCACTTGCCAGGGCATAGAGATGGAGGGCAGAGGAGGATTT  600

seq1  TGTAGTCAGTTCTTTCCTTCCATCTCTGTATGTGGTCCAGGGATCAA-CC  649
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TGTAGTCAGTTCTTTCCTTCCATCTCTGTATGTGGTCCAGGGATCAACCC  650

seq1  TTTGGTTGTCAGTGCCTTTATCCTCTGAACCTTCTTGCCACATTACCCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTGGTTGTCAGTGCCTTTATCCTCTGAACCTTCTTGCCACATTACCCT-  699

seq1  CCCTGCCCCCATCCCCATTCATTTTCTTTTAAATTTTTTTCAGTTTATTT  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCCTGCCCCCATCCCCATTCA-TTTCTTTTAAATTTTTTTCAGTTTATTT  748

seq1  TATAAAACAATTTTTAAGGCTTTTGCTTTTTTTGTGGTTTAAACACACTC  799
      |||||||| |||||||  || |||||||||||||||  || |||||||||
seq2  TATAAAAC-ATTTTTA--GC-TTTGCTTTTTTTGTG--TTTAACACACTC  792

seq1  TATACCGGAAGTAGATAC-ACATAGGAATTTTACAGTCGGCAGCACGGGC  848
      |||||||| ||||||||| ||||||  ||||||||||| |||||||||||
seq2  TATACCGG-AGTAGATACAACATAG--ATTTTACAGTC-GCAGCACGGGC  838

seq1  CTCTACACTGTA-TTCTCGGGTCTGGTCTG  877
      |||||||||| | ||||| |||||||||||
seq2  CTCTACACTGAATTTCTC-GGTCTGGTCTG  867