BAC Information

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BAC

Clone NameB6Ng01-270G18
Chromosome7 (Build37)
Map Location 151,733,385 - 151,734,576
singlet/doubletsinglet
Overlap genePpfia1
Upstream geneNap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn
Downstream geneFadd, Tmem16a, LOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270G18.bB6Ng01-270G18.g
ACCGA072765GA072766
length1,181335
definitionB6Ng01-270G18.b B6Ng01-270G18.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaataaacacttttctggttttgttttgtttttttccaatcaggt
ccatccaggctaacttagaaaccatttcgtagcccagaatagcctcacac
ttagtaacatagtagtcttcctccctcagcctccctagtactgagccacc
acacaggaatatcacatatgagttttttcaaaatcattaagaagatcctg
agtttgagaccatctgggctacagcaagaacctgtctcaaaaaacaattg
aacaaatttaaaaaaaaaaaaaaaaaaaggactgttaggaagcatagaaa
gaagtgtctcatacttaacagagaatgtttatttaccaaagcctttcagt
aactattgcaattgcagatagaacagtgcacgaatgcttccaggagcaaa
acaagagcccgtaacaaccatgggtggcagttacatcctgtgttgaagaa
ttcagccagtccaactccacaagaaaatcatcaatcaatcagagatccag
agcaggagtgagaaagcaactccaaatcctaaaactcagttcttgttgag
tgtggagtccacacctataatcccagcttttaggaatctggggtaggaaa
atcacaaattgaaactcacctgatcaacagagatcaagttttaaaaaaaa
aaaaaaaaaaggcaaaagtcagttctctttaggaactagagatatgggtc
agcagtttaagagtacctggctacccttccaggggacccagggttcaatt
tccagcacccacatggtgtctcacaaccgcatataactccaatcccaggg
aatccaacaccttttctggccttcaagggtactgcatgcagtggggaaca
gatatccatacagaaaaaaaaataaccatacacataaaacaaataaatgt
tcaagacagtattttttaaataagccagttctatctcaatacaccaacaa
taaatagttacaccgctgtgttctactgtagactcaaagagcatgctgaa
aagaacactggccccacagagtagatagacatgtcaaagaataaggtcat
gcagctgactgtgtgtgttgtatgttggccacacatgcgaagtcaaataa
taactaacagagtgccttctctctcttccttccacactagttccagcagg
ctccagctgtgagcaggcactttaacccacc
catgttcctcaccttctcaggcaccaacactcatacgcacataccccaca
tggacacacagggatatagctaaaaataataaaataaatatttaaaactt
tattattattgttgttgttgctgttgttgttattgttgagggtatgtatg
atgtgtgtggggattcatgcttgccgctgcacatgtgtgaaaaacagagg
acaattttgtgggttagttctctctttctaccttgatgtgtggggtctgg
ggcttgaactcaggttgccaggctagcgtgaaaaaagctgttacttactg
agccatctcactgttagctcattcttttactattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151733385_151734576
seq2: B6Ng01-270G18.b_43_1223

seq1  GAATTCAATAAACACTTTTCTGGTTTTGTTTTGTTTTTTTCCAATCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAACACTTTTCTGGTTTTGTTTTGTTTTTTTCCAATCAGGT  50

seq1  CCATCCAGGCTAACTTAGAAACCATTTCGTAGCCCAGAATAGCCTCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGGCTAACTTAGAAACCATTTCGTAGCCCAGAATAGCCTCACAC  100

seq1  TTAGTAACATAGTAGTCTTCCTCCCTCAGCCTCCCTAGTACTGAGCCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACATAGTAGTCTTCCTCCCTCAGCCTCCCTAGTACTGAGCCACC  150

seq1  ACACAGGAATATCACATATGAGTTTTTTCAAAATCATTAAGAAGATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAATATCACATATGAGTTTTTTCAAAATCATTAAGAAGATCCTG  200

seq1  AGTTTGAGACCATCTGGGCTACAGCAAGAACCTGTCTCAAAAAACAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAGACCATCTGGGCTACAGCAAGAACCTGTCTCAAAAAACAATTG  250

seq1  AACAAATTTAAAAAAAAAAAAAAAAAAAGGACTGTTAGGAAGCATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTTAAAAAAAAAAAAAAAAAAAGGACTGTTAGGAAGCATAGAAA  300

seq1  GAAGTGTCTCATACTTAACAGAGAATGTTTATTTACCAAAGCCTTTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTCTCATACTTAACAGAGAATGTTTATTTACCAAAGCCTTTCAGT  350

seq1  AACTATTGCAATTGCAGATAGAACAGTGCACGAATGCTTCCAGGAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTGCAATTGCAGATAGAACAGTGCACGAATGCTTCCAGGAGCAAA  400

seq1  ACAAGAGCCCGTAACAACCATGGGTGGCAGTTACATCCTGTGTTGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCCCGTAACAACCATGGGTGGCAGTTACATCCTGTGTTGAAGAA  450

seq1  TTCAGCCAGTCCAACTCCACAAGAAAATCATCAATCAATCAGAGATCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCAGTCCAACTCCACAAGAAAATCATCAATCAATCAGAGATCCAG  500

seq1  AGCAGGAGTGAGAAAGCAACTCCAAATCCTAAAACTCAGTTCTTGTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTGAGAAAGCAACTCCAAATCCTAAAACTCAGTTCTTGTTGAG  550

seq1  TGTGGAGTCCACACCTATAATCCCAGCTTTTAGGAATCTGGGGTAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTCCACACCTATAATCCCAGCTTTTAGGAATCTGGGGTAGGAAA  600

seq1  ATCACAAATTGAAACTCACCTGATCAACAGAGATCAAGTTTTAAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAATTGAAACTCACCTGATCAACAGAGATCAAGTTTTAAAAAAAA  650

seq1  AAAAAAAAAAGGCAAAAGTCAGTTCTCTTTAGGAACTAGAGATATGGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGGCAAAAGTCAGTTCTCTTTAGGAACTAGAGATATGGGTC  700

seq1  AGCAGTTTAAGAGTACCTGGCTACCCTTCCAGGGGACCCAGGGTTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTAAGAGTACCTGGCTACCCTTCCAGGGGACCCAGGGTTCAATT  750

seq1  TCCAGCACCCACATGGTGTCTCACAACCGCATATAACTCCAATCCCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACCCACATGGTGTCTCACAACCGCATATAACTCCAATCCCAGGG  800

seq1  AATCCAACACCTTTTCTGGCCTTCAAGGGTACTGCATGCAGGTGGGGAAC  850
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AATCCAACACCTTTTCTGGCCTTCAAGGGTACTGCATGCA-GTGGGGAAC  849

seq1  AGATATCCATACAGAAAAAAAAATAACCATACACATAAAAACAAATAAAT  900
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGATATCCATACAGAAAAAAAAATAACCATACACAT-AAAACAAATAAAT  898

seq1  GTTCAAGACAGTATTTTTTAAATAAGCCAGTTCTATCTCAATACACCAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGACAGTATTTTTTAAATAAGCCAGTTCTATCTCAATACACCAAC  948

seq1  AATAAATAGTTACACCGCTGTGTTCTACTGTAGACTCAAAGAGCAATGCT  1000
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AATAAATAGTTACACCGCTGTGTTCTACTGTAGACTCAAAGAGC-ATGCT  997

seq1  GAAAAG-ACACTGGCCCCACAGAGTAGATTAGACATGTTCAAAG-ATAAA  1048
      |||||| ||||||||||||||||||||| |||||||| |||||| |||| 
seq2  GAAAAGAACACTGGCCCCACAGAGTAGA-TAGACATG-TCAAAGAATAAG  1045

seq1  GTCATGCAGCCTGACTGTGTGTG-TGTATGTTGG-CACACATGCAGAGGT  1096
      ||||||||| ||||||||||||| |||||||||| ||||||||| || ||
seq2  GTCATGCAG-CTGACTGTGTGTGTTGTATGTTGGCCACACATGC-GAAGT  1093

seq1  CAAATAATAACTTACAGGAATTGCTTCTCTCTC-TCCTTCCACCACTAGT  1145
      |||||||||||| ||| || |  |||||||||| |||||||| |||||||
seq2  CAAATAATAACTAACA-GAGTGCCTTCTCTCTCTTCCTTCCA-CACTAGT  1141

seq1  TCCAAGGCCAGGCTCCCAGGCTTGTGAAGCAAGCACTTTAACCCACC  1192
      ||||    |||||| ||||   |||| |||| |||||||||||||||
seq2  TCCA---GCAGGCT-CCAG--CTGTG-AGCAGGCACTTTAACCCACC  1181