BAC Information

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BAC

Clone NameB6Ng01-270K12
Chromosome7 (Build37)
Map Location 128,303,014 - 128,461,388
singlet/doubletdoublet
Overlap geneOtoa, LOC668556
Upstream geneAnks4b, Crym, Abca14, Abca15, Abca16, LOC668429, LOC546994, LOC100042914, E130201H02Rik, LOC637957, Uqcrc2, 4930408O21Rik, BC030336, E030013G06Rik, EG436008, LOC100043426, Eef2k, Polr3e, Cdr2, 4933427G17Rik, EG668548, Mettl9, LOC668456, Igsf6
Downstream geneHs3st2, Usp31, Scnn1g, Scnn1b, Cog7, Gga2, Ears2, Ubfd1, Ndufab1, Palb2, Dctn5, Plk1, Ern2, 2010110P09Rik, Prkcb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270K12.bB6Ng01-270K12.g
ACCGA072941GA072942
length1,1501,079
definitionB6Ng01-270K12.b B6Ng01-270K12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,460,239 - 128,461,388)(128,303,014 - 128,304,079)
sequence
gaattctgtcaaaacaagtttggtgagcactaccaggagaatgggattat
aaggaaagaagtcattcagaacaatgggatgggacttcggggaaacctct
gtatgagattttgtgaaggaatgcaggcttgtcactcagggttttgccag
ggaaaggagctacagcagtccccaagattaagatatacagtccaagaaac
attttataaggtataaagttgatttttaaaaaggatcactaaaaggaagg
aaggaagctcagagacatgactacatcccataaggatcaaggtaacaaag
gaaggaaccatggttactaaaacacagaagttcagaggaggtgatgcaag
ccagctggtgctgatgctggcatctctcatgagactgggtcatccatgag
ttcagaaaacaaaacaccatagactggatctggaagggggaatcttaaga
cagtcacaggaacaggcagccactagcaagcggttaagtctcccctttct
gtcgcagcctccccccaccccaacacagaaagcctcccctacagacagaa
tctgtcagggagtagagaatgtgcctcacggtagaaatatggttgacaga
atctcaggcacagcatcatgaagacaaatacaaagggctgaatttgcagc
caagagacatcaatttaatagctggctagtgtgggcaaaaagaaagaggg
ccattttcacaattactttacagaagaagattctcctgtccctgtaagcc
taggaagacgaagcccagggagatcaagcaatctgtgaaaggtcacacag
tagcggatagacctggatgagctagtgcttgttctgcattagcttcagcc
ctcaccgtggacttgggtaaggatggtgtcttcctgtctccagtcatttt
tcctggaattggcttctatcccattttagccccccccccccccccccagg
aaaagctgatcccaagatgaaatttagctatacaaaaagtaaggttacct
tttctgatttttctgagtttagcagagcctgcattctgatgaaggtgcca
ctgacgacgtctgcctggattgaggagggagcgattgatcacaggcttcg
agaaacacatgagaacctgccaagccatcttcttcatcagctatgatcca

gaattcaatttcaggaggcatctgcttggataggagggaagtgagaggcc
aataggaaaggaagggataaaggaacaggagtatgtggagtcctagcttc
tgggagatgcttaatgcaattaggagatgtcagaagctcttctgccaggc
catctcaacctagtctccctggtgctagccaccaagtccttttgaagtgg
tatgacttcagaacatatctgtccatggcagcattaacaaataaacagcc
agtcatggctcttgacctctgctgagctaccaggattcatcagccaacca
ggattctgatagtcataccaaagggacagggatggccttggaggtgaggt
ctctgagtcacctcaaagtaaggccaaaagcctagaaaggtgacataatc
tgggaagatcacacagctgatgtgtgggcagactcaggctggcactcagg
ccagagcttgcttagtcggagcttcctctggcacaaagtaattaccaaca
ctcacatggaaagccaagaacccttttaatgcttttaattacttcaagga
aaagtctcagcttggagtgagaatggcttaatacccttgtaatatttaaa
aaatctcccatgctttttttttttttttttttttttttaaaaaggctcag
agttcagctgctgttggttgacacatcgaacagggattcaaatagtttcc
ttaagcctctatttagtgcttgcttacagccacagtgcaagggtctgaca
aagttgtgcagataaagggaggtttggaaaatctggagagggtatactga
ggtcccctgcccctccactttcctgcctgcaggagcttgtccacgggaag
cagatcgctttccctgggtccctcagaatgcagcctctgttaacccactc
ccagcgccctgcagctcagctcggcacaagctgcagaagcctcagaaggg
gcactagatggcgccaggactcaactcctggcagacggattcctctgagt
tccagcccttaccttggccagctccaacttgggtcccaacagtgacagag
cacaagctgcttcagccccactccactcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_128460239_128461388
seq2: B6Ng01-270K12.b_44_1193 (reverse)

seq1  TGGATCATTAGCCTGATGGAG-AGATGGCTGGGAAGGTTTCTCATGTG-T  48
      ||||||| ||| |||||| || |||||||| || ||| |||||||||| |
seq2  TGGATCA-TAG-CTGATGAAGAAGATGGCTTGGCAGG-TTCTCATGTGTT  47

seq1  TCTCG-AGGCTGTGATTCAACCGCTCCCTCCTCCATCCAGGGCAGACCGT  97
      ||||| || |||||| |||| |||||||||||| ||||| |||||| |||
seq2  TCTCGAAGCCTGTGA-TCAATCGCTCCCTCCTCAATCCA-GGCAGA-CGT  94

seq1  CGTCAGTGGCACCTCAATCAG-ATGCAGGCTCTGCTAAACTCAG-AAAAT  145
      ||||||||||||||  ||||| |||||||||||||||||||||| |||||
seq2  CGTCAGTGGCACCTTCATCAGAATGCAGGCTCTGCTAAACTCAGAAAAAT  144

seq1  CAGAAAAGGTAAACCTTACTTTTTGTATAGCTAAATTTCATCTTGGGATC  195
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAAGGT-AACCTTACTTTTTGTATAGCTAAATTTCATCTTGGGATC  193

seq1  AGCTTTTCCT--GGGGGGGGGGGGGGGGCTAAAATGGGATAGAAGCCAAT  243
      ||||||||||  ||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCCTGGGGGGGGGGGGGGGGGGCTAAAATGGGATAGAAGCCAAT  243

seq1  TCCAGGAAAAATGACTGGAGACAGGAAGACACCATCCTTACCCAAGTCCA  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAAAAATGACTGGAGACAGGAAGACACCATCCTTACCCAAGTCCA  293

seq1  CGGTGAGGGCTGAAGCTAATGCAGAACAAGCACTAGCTCATCCAGGTCTA  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAGGGCTGAAGCTAATGCAGAACAAGCACTAGCTCATCCAGGTCTA  343

seq1  TCCGCTACTGTGTGACCTTTCACAGATTGCTTGATCTCCCTGGGCTTCGT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGCTACTGTGTGACCTTTCACAGATTGCTTGATCTCCCTGGGCTTCGT  393

seq1  CTTCCTAGGCTTACAGGGACAGGAGAATCTTCTTCTGTAAAGTAATTGTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAGGCTTACAGGGACAGGAGAATCTTCTTCTGTAAAGTAATTGTG  443

seq1  AAAATGGCCCTCTTTCTTTTTGCCCACACTAGCCAGCTATTAAATTGATG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGGCCCTCTTTCTTTTTGCCCACACTAGCCAGCTATTAAATTGATG  493

seq1  TCTCTTGGCTGCAAATTCAGCCCTTTGTATTTGTCTTCATGATGCTGTGC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGGCTGCAAATTCAGCCCTTTGTATTTGTCTTCATGATGCTGTGC  543

seq1  CTGAGATTCTGTCAACCATATTTCTACCGTGAGGCACATTCTCTACTCCC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTCTGTCAACCATATTTCTACCGTGAGGCACATTCTCTACTCCC  593

seq1  TGACAGATTCTGTCTGTAGGGGAGGCTTTCTGTGTTGGGGTGGGGGGAGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAGATTCTGTCTGTAGGGGAGGCTTTCTGTGTTGGGGTGGGGGGAGG  643

seq1  CTGCGACAGAAAGGGGAGACTTAACCGCTTGCTAGTGGCTGCCTGTTCCT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCGACAGAAAGGGGAGACTTAACCGCTTGCTAGTGGCTGCCTGTTCCT  693

seq1  GTGACTGTCTTAAGATTCCCCCTTCCAGATCCAGTCTATGGTGTTTTGTT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGTCTTAAGATTCCCCCTTCCAGATCCAGTCTATGGTGTTTTGTT  743

seq1  TTCTGAACTCATGGATGACCCAGTCTCATGAGAGATGCCAGCATCAGCAC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACTCATGGATGACCCAGTCTCATGAGAGATGCCAGCATCAGCAC  793

seq1  CAGCTGGCTTGCATCACCTCCTCTGAACTTCTGTGTTTTAGTAACCATGG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGGCTTGCATCACCTCCTCTGAACTTCTGTGTTTTAGTAACCATGG  843

seq1  TTCCTTCCTTTGTTACCTTGATCCTTATGGGATGTAGTCATGTCTCTGAG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTTGTTACCTTGATCCTTATGGGATGTAGTCATGTCTCTGAG  893

seq1  CTTCCTTCCTTCCTTTTAGTGATCCTTTTTAAAAATCAACTTTATACCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCCTTCCTTTTAGTGATCCTTTTTAAAAATCAACTTTATACCTT  943

seq1  ATAAAATGTTTCTTGGACTGTATATCTTAATCTTGGGGACTGCTGTAGCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATGTTTCTTGGACTGTATATCTTAATCTTGGGGACTGCTGTAGCT  993

seq1  CCTTTCCCTGGCAAAACCCTGAGTGACAAGCCTGCATTCCTTCACAAAAT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCCCTGGCAAAACCCTGAGTGACAAGCCTGCATTCCTTCACAAAAT  1043

seq1  CTCATACAGAGGTTTCCCCGAAGTCCCATCCCATTGTTCTGAATGACTTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATACAGAGGTTTCCCCGAAGTCCCATCCCATTGTTCTGAATGACTTC  1093

seq1  TTTCCTTATAATCCCATTCTCCTGGTAGTGCTCACCAAACTTGTTTTGAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTATAATCCCATTCTCCTGGTAGTGCTCACCAAACTTGTTTTGAC  1143

seq1  AGAATTC  1150
      |||||||
seq2  AGAATTC  1150

seq1: chr7_128303014_128304079
seq2: B6Ng01-270K12.g_67_1145

seq1  GAATTCAATTTCAGGAGGCATCTGCTTGGATAGGAGGGAAGTGAGAGGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTTCAGGAGGCATCTGCTTGGATAGGAGGGAAGTGAGAGGCC  50

seq1  AATAGGAAAGGAAGGGATAAAGGAACAGGAGTATGTGGAGTCCTAGCTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGAAAGGAAGGGATAAAGGAACAGGAGTATGTGGAGTCCTAGCTTC  100

seq1  TGGGAGATGCTTAATGCAATTAGGAGATGTCAGAAGCTCTTCTGCCAGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGATGCTTAATGCAATTAGGAGATGTCAGAAGCTCTTCTGCCAGGC  150

seq1  CATCTCAACCTAGTCTCCCTGGTGCTAGCCACCAAGTCCTTTTGAAGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAACCTAGTCTCCCTGGTGCTAGCCACCAAGTCCTTTTGAAGTGG  200

seq1  TATGACTTCAGAACATATCTGTCCATGGCAGCATTAACAAATAAACAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACTTCAGAACATATCTGTCCATGGCAGCATTAACAAATAAACAGCC  250

seq1  AGTCATGGCTCTTGACCTCTGCTGAGCTACCAGGATTCATCAGCCAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATGGCTCTTGACCTCTGCTGAGCTACCAGGATTCATCAGCCAACCA  300

seq1  GGATTCTGATAGTCATACCAAAGGGACAGGGATGGCCTTGGAGGTGAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTCTGATAGTCATACCAAAGGGACAGGGATGGCCTTGGAGGTGAGGT  350

seq1  CTCTGAGTCACCTCAAAGTAAGGCCAAAAGCCTAGAAAGGTGACATAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGTCACCTCAAAGTAAGGCCAAAAGCCTAGAAAGGTGACATAATC  400

seq1  TGGGAAGATCACACAGCTGATGTGTGGGCAGACTCAGGCTGGCACTCAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAAGATCACACAGCTGATGTGTGGGCAGACTCAGGCTGGCACTCAGG  450

seq1  CCAGAGCTTGCTTAGTCGGAGCTTCCTCTGGCACAAAGTAATTACCAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAGCTTGCTTAGTCGGAGCTTCCTCTGGCACAAAGTAATTACCAACA  500

seq1  CTCACATGGAAAGCCAAGAACCCTTTTAATGCTTTTAATTACTTCAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACATGGAAAGCCAAGAACCCTTTTAATGCTTTTAATTACTTCAAGGA  550

seq1  AAAGTCTCAGCTTGGAGTGAGAATGGCTTAATACCCTTGTAATATTTAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCTCAGCTTGGAGTGAGAATGGCTTAATACCCTTGTAATATTTAAA  600

seq1  AAATCTCCCATGCTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGGCTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTCCCATGCTTTTTTTTTTTTTTTTTTTTTTTTTAAAAAGGCTCAG  650

seq1  AGTTCAGCTGCTGTTGGTTGACACATCGAACAGGGATTCAAATAGTTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAGCTGCTGTTGGTTGACACATCGAACAGGGATTCAAATAGTTTCC  700

seq1  TTAAGCCTCTATTTAGTGCTTGCTTACAGCCACAGTGCAAGGGTCTGACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCCTCTATTTAGTGCTTGCTTACAGCCACAGTGCAAGGGTCTGACA  750

seq1  AAGTTGTGCAGATAAA-GGAGGTTTGGAAAATCTGGAGAGGGTATACTGA  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGTTGTGCAGATAAAGGGAGGTTTGGAAAATCTGGAGAGGGTATACTGA  800

seq1  GGTCCCCTG-CCCTCCACTTTCCTGCCTGCAGGAGC-TGTCCACGG--AG  845
      ||||||||| |||||||||||||||||||||||||| |||||||||  ||
seq2  GGTCCCCTGCCCCTCCACTTTCCTGCCTGCAGGAGCTTGTCCACGGGAAG  850

seq1  CAGATCGC-TTCCCTGGGT-CCTCAGAATGCAGCCTCTG-TAACCCACTC  892
      |||||||| |||||||||| ||||||||||||||||||| ||||||||||
seq2  CAGATCGCTTTCCCTGGGTCCCTCAGAATGCAGCCTCTGTTAACCCACTC  900

seq1  CCAGCG-CCTGCAGCTCAGCTCGGCAC-AGCTGCAG-AGCCTCCAGA--G  937
      |||||| |||||||||||||||||||| |||||||| ||||| ||||  |
seq2  CCAGCGCCCTGCAGCTCAGCTCGGCACAAGCTGCAGAAGCCT-CAGAAGG  949

seq1  GGCACTAGATGGCGCCAAGACTC-ACTCCTGGCAGACCGA-TCCTCTGAG  985
      ||||||||||||||||| ||||| ||||||||||||| || |||||||||
seq2  GGCACTAGATGGCGCCAGGACTCAACTCCTGGCAGACGGATTCCTCTGAG  999

seq1  TTCCAGCCC-TACC-TGGCCAGCCTCCACTGGGTCCCCAACAGGTGAACA  1033
      ||||||||| |||| ||||||||  | ||| ||  ||||||| ||| |||
seq2  TTCCAGCCCTTACCTTGGCCAGCTCCAACTTGGGTCCCAACA-GTG-ACA  1047

seq1  GAGCAACAGCTGCCTCAGCCCCACTCCCACTCC  1066
      |||||  |||||| ||||||||||| |||||||
seq2  GAGCACAAGCTGCTTCAGCCCCACT-CCACTCC  1079