BAC Information

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BAC

Clone NameB6Ng01-270L14
Chromosome7 (Build37)
Map Location 8,587,971 - 8,589,143
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724
Downstream geneLOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270L14.bB6Ng01-270L14.g
ACCGA072990GA072991
length1,2101,180
definitionB6Ng01-270L14.b B6Ng01-270L14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagaagctggactccagaaaaccaaataaccccattaaaaatgg
ggtacaaagagagctaagcaaagaattctcaactgaggaatactgaatgg
ctgagaagcacctaaagaaatgttcaacatccttaatgatcagtgaaatg
cgaatcaaaacaaccctgagattccatttcacaccagtcagaatggctga
gaacaaaaattcagttgctagcagatgctggggaggatgtggtaaaagag
gaacactcctccattgctgatgggatggcgagctggtacaaccactctgg
aaatcaatctggtgtttcatcagaaaattggcaaatatagaactaatgga
agatccagcaatatctctcctgttcatatacccagaagatgttcccattt
gtaataggatatatgctccactatgttcatagcaacattatttataatag
ctatgtaaccctggctgtcctaaaactcactgtgtagtccaggctgacct
tgaactccatcatatgtctgctatatgtaccaatgccacagggcagcaaa
gaccatcgttatgagcgaaaaaattaataaataaaatgggactgtaagac
tggatcactatcagggacatcagccctctgcctgggcttagcacacacat
cccagagttgcaaaaatcaggtaaactaagtgtcctctgccaccccatag
agcatctccaggccctcagacagggctgtccagagaggcacatgaatgtg
ggtgattttacccaaggcttagacgagttataccgtggtggtgcaaattt
cagacctgtctaggctccaggtggatgaatggcttttctctctctctctc
cctctctctctctctctctctctctctcctttctttctttcctttgagtc
agcctttctctgtgtagccttggctgcactagtggtagaccaagctagcc
acaaactcagatttcccactgggattataatgtatgccactaacacctcc
tgccaactcttccctgcctttatgccaccacagtgggttttggttaatgt
agtttcaaacaacttccaccatgcatacccagaacagtttgcagagatgg
acagtgagacctatggtgtaaggagtttaaggggacttcctacagactag
atccattacaatattgctcagtgtttacattcccccacccacccctcttg
gaagcctgct
gaattctcacctgaggaataccgaatggcagagaaggacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcacactggaaatcagtctggcggttcctcagaaaattggacata
gtactaccggaggatccctcaatacctctcctgggcatatatccagaaga
tgccccaactgggaagaagggcacatgctccactatgttcatagcagcct
tatttataatagccagaagctggaaagaacccagatgcccctcaacagag
gaatggatacagaaaatatggtacatctacacaatggagtactactcagc
tattaaaaagaatgaatttatgaaattcctagccaaatggacggacctgg
agagcatcagtctgagtgaggtaacacattcacaaaggaactcacacaat
atgtactcactgataagtggatattagtcccaaacctaggatacccaaga
tataagatacaatttcctaaacacatgaaactcaagaaaaatgaagactg
aagtgtggacactatgcccctccttagaagtgggaacaaaactcccttgg
aagaagttacagagacaaagtttggagctgagatgaaaggatggaccatg
tagagactgccatatccagggatccaccccataatcagcatccaaacgct
ggcaccattgcatacactagcaagattttatcgaaaggacccagatatag
ctctctcttgtgagactatgccggggcctagcaaacacagaagtgtggat
gctcacagtcagctagtggatggatcacagggctcccaatggaggagcta
gagaaagtacccaaggagctaaagggatctgcagacttttgggtatagca
ttgaaatgtaaatgagctaaatacctaataaaatttaaaaaaaaaaaaga
actacccttagtgagctataggcactgcacctaataggtggaacaacata
tgacttacagtaccgggaagccttctttagctgcaatgtatcaaagaatg
ctagttcgggcattcactgtgccaagagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_8587971_8589143
seq2: B6Ng01-270L14.b_70_1254

seq1  AACCAAATAACCCCATTAAAAATGGGGTACAAAGAGAGCTAAGCAAAGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAATAACCCCATTAAAAATGGGGTACAAAGAGAGCTAAGCAAAGAA  50

seq1  TTCTCAACTGAGGAATACTGAATGGCTGAGAAGCACCTAAAGAAATGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAACTGAGGAATACTGAATGGCTGAGAAGCACCTAAAGAAATGTTC  100

seq1  AACATCCTTAATGATCAGTGAAATGCGAATCAAAACAACCCTGAGATTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCTTAATGATCAGTGAAATGCGAATCAAAACAACCCTGAGATTCC  150

seq1  ATTTCACACCAGTCAGAATGGCTGAGAACAAAAATTCAGTTGCTAGCAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACACCAGTCAGAATGGCTGAGAACAAAAATTCAGTTGCTAGCAGA  200

seq1  TGCTGGGGAGGATGTGGTAAAAGAGGAACACTCCTCCATTGCTGATGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGGAGGATGTGGTAAAAGAGGAACACTCCTCCATTGCTGATGGGA  250

seq1  TGGCGAGCTGGTACAACCACTCTGGAAATCAATCTGGTGTTTCATCAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGAGCTGGTACAACCACTCTGGAAATCAATCTGGTGTTTCATCAGAA  300

seq1  AATTGGCAAATATAGAACTAATGGAAGATCCAGCAATATCTCTCCTGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGCAAATATAGAACTAATGGAAGATCCAGCAATATCTCTCCTGTTC  350

seq1  ATATACCCAGAAGATGTTCCCATTTGTAATAGGATATATGCTCCACTATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACCCAGAAGATGTTCCCATTTGTAATAGGATATATGCTCCACTATG  400

seq1  TTCATAGCAACATTATTTATAATAGCTATGTAACCCTGGCTGTCCTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGCAACATTATTTATAATAGCTATGTAACCCTGGCTGTCCTAAAA  450

seq1  CTCACTGTGTAGTCCAGGCTGACCTTGAACTCCATCATATGTCTGCTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTGTGTAGTCCAGGCTGACCTTGAACTCCATCATATGTCTGCTATA  500

seq1  TGTACCAATGCCACAGGGCAGCAAAGACCATCGTTATGAGCGAAAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAATGCCACAGGGCAGCAAAGACCATCGTTATGAGCGAAAAAATT  550

seq1  AATAAATAAAATGGGACTGTAAGACTGGATCACTATCAGGGACATCAGCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATAAAATGGGACTGTAAGACTGGATCACTATCAGGGACATCAGCC  600

seq1  CTCTGCCTGGGCTTAGCACACACATCCCAGAGTTGCAAAAATCAGGTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGCCTGGGCTTAGCACACACATCCCAGAGTTGCAAAAATCAGGTAAA  650

seq1  CTAAGTGTCCTCTGCCACCCCATAGAGCATCTCCAGGCCCTCAGACAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGTCCTCTGCCACCCCATAGAGCATCTCCAGGCCCTCAGACAGGG  700

seq1  CTGTCCAGAGAGGCACATGAATGTGGGTGATTTTACCCAAGGCTTAGACG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAGAGAGGCACATGAATGTGGGTGATTTTACCCAAGGCTTAGACG  750

seq1  AGTTATACCGTGGTGGTGCAAATTTCAGACCTGTCTAGGCTCCAGGTGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATACCGTGGTGGTGCAAATTTCAGACCTGTCTAGGCTCCAGGTGGA  800

seq1  TGAATGGCTTTTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGGCTTTTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCTCTCTCTCT  850

seq1  CTCCTTTCTTTCTTTCCTTTGAGTCAGCCTTTCTCTGTGTAGCCTTGGCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTCTTTCTTTCCTTTGAGTCAGCCTTTCTCTGTGTAGCCTTGGCT  900

seq1  GCACTAGGTGGTAGACCAAGCTAGCCACAAACTCAGATAT-CCACTGGGA  949
      |||||| ||||||||||||||||||||||||||||||| | |||||||||
seq2  GCACTA-GTGGTAGACCAAGCTAGCCACAAACTCAGATTTCCCACTGGGA  949

seq1  TTAT-ATGTATG-CACTAACACCTCCTGCC-ACTCTT-CCTGCCTTTATG  995
      |||| ||||||| ||||||||||||||||| |||||| ||||||||||||
seq2  TTATAATGTATGCCACTAACACCTCCTGCCAACTCTTCCCTGCCTTTATG  999

seq1  C--ACACAGTGGGTTTTGGTTAATGTAG-TTCAAACAACTT-CACCATGG  1041
      |   |||||||||||||||||||||||| |||||||||||| ||||||| 
seq2  CCACCACAGTGGGTTTTGGTTAATGTAGTTTCAAACAACTTCCACCATGC  1049

seq1  ATA-CCAGGACAG-TTGCAGAGATGGACAGTGGAGAACTAATGTGTAAGG  1089
      ||| |||| |||| ||||||||||||||||| |||| |||  ||||||||
seq2  ATACCCAGAACAGTTTGCAGAGATGGACAGT-GAGACCTATGGTGTAAGG  1098

seq1  AG-TTAAGGGGACTCCCTACAGACTAGATCCATTTACATA-TGCTCAGTG  1137
      || ||||||||||| |||||||||||||||||||   ||| |||||||||
seq2  AGTTTAAGGGGACTTCCTACAGACTAGATCCATTACAATATTGCTCAGTG  1148

seq1  TTCCCTTCCCCCCACCCCACCCCTC-TGGAAG-CTGCT  1173
      ||  | | |||||| |||||||||| |||||| |||||
seq2  TTTACATTCCCCCA-CCCACCCCTCTTGGAAGCCTGCT  1185