BAC Information

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BAC

Clone NameB6Ng01-271B04
Chromosome7 (Build37)
Map Location 32,271,538 - 32,272,633
singlet/doubletsinglet
Overlap genenone
Upstream geneNphs1, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181
Downstream geneLOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271B04.bB6Ng01-271B04.g
ACCGA073251GA073252
length1,2081,104
definitionB6Ng01-271B04.b B6Ng01-271B04.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gattccttataaccccttgggacaagaaatagataaacttgctcatcaca
cttttagaaattggcttttaaaaacaaaacaggggcagttatatccccca
agggcaccaaagcacatcttgcttttactttatttgttctaaattttttg
caaactgatgttaaaagtcagttggcagtggattgccactggcatcagtt
acttctagtttttatgccatggtaaagtggcaggacccatttactaatga
atggaagggtccagaccaggtcctaatctgggaaaagggcttggtctgtg
ttttttcacaaaaagaagatggacctcgatggctgcctgagagattagtt
cgacaactagacacagatcctgaatcttctagtaagtaagactctaacct
tgattatggctaaaagtcctctttagccaaaaagttaaattagagcacag
cctccactcccagggaagctgtaagcctttttgcaattctcaaagtcacc
tcccccacacagggagctctaagtctagcctgatctttgctaatttgcaa
ttgaatggagtacctggacttccccaaaagaagcttttgtactgtgcctt
tcactgtctcaactttgtttttttaagcagttcagtcaacacccttcacc
ctgattgcagcagacacgtatccccgcccacaacagcgagcaagtggcag
ttattaatttttatcaagaggaattctaagtatatattgtgactttggtc
tgatttgggaataaggtgcgctatgagggccggttagtcaatgacaggca
acagatcccagaacacaccaatctaagacaggtgtacatgccaaaaggcc
atggctgttaataatacaccataaagccatgctttgtgtgaattatgaca
caaactagctacatgtaactttcctatgaaagaattgggatggtttgaga
ggatctgagatcctaagcagcacactcgccatccaccataattccaggca
ggactatgaagcataaataaatttttatgccatcagtccagctttttatt
aaatattaataccagcagagatgtagccttccctcagctgaagcagccta
ggcagacttgacattactgcacttaaggagattatctaggtggaagcctc
ctacctagatcactctatggtcagaacctgttcagtttctcttctcagag
aatatacg
gaattccagaggatctatagatgttacttctgggaggtgatctcccgtca
gtcaaaagaaccaagactaggtaatgtatttgggaaagaagttaatttgc
ttcatgatctgaaatgttgaaggtcaaggatagggcaagctcaggtagtc
agggacttgtgatgtctgatcccagggtacacagcagaagaataaccgga
tattgtggaagacagagagcagaggctccactctgcttctcaagcaccca
tgatatgctcactgaccaggcctgccacagtggggaacaatactcaacgt
ggctattggtgtgtgcctcatacatgttaatgcataggtggcccttcctt
cggacatgttggtttttgatgcagattgagtatttaggagacaaattacc
caggcaggtggagaaaatgtgttataggtaatgagggcagaccatatgaa
ggccctgccttttgcttgtgtcacacttacagagaaagggtgtcatacct
agtataaagtctctgcaaatgacaaacacagtgttgaaatggtaaattgc
aggtacaggtttacacagagcaatcagatgaccagcaaagttgaaagaaa
tgatgtgaaagtacatggtactttccacctgtgatccccatttgtgggaa
gctgaggtaggtgtgccccagttacctgtctcgatctccttaatcacaaa
gataaaaattgtgctcaggtaggggggttgttctaccaagttggcttcca
cctcttccttgccctccatgtttggcaacagtgagcagaagtttggctct
aaatgaaatatattttagctaccctctataaaagacacaaagcctttggt
acattatttgaagagctataagcctaaattgggtgggttctgtacacttt
taacttatatcccaattcataagccccatgttacttgctgtccaagtgtc
acccaggattattttctgctcatcaatctgcccgaatggtccactggatc
ctggtaatatgcttttgagccatcaaacctcatgggcaagccttccgtct
ctcgtatctcgtatccttcctcctctactctctaatggccttctggattc
ttat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32271538_32272633
seq2: B6Ng01-271B04.g_67_1170

seq1  GAATTCCAGAGGATCTATAGATGTTACTTCTGGGAGGTGATCTCCCGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGAGGATCTATAGATGTTACTTCTGGGAGGTGATCTCCCGTCA  50

seq1  GTCAAAAGAACCAAGACTAGGTAATGTATTTGGGAAAGAAGTTAATTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAAGAACCAAGACTAGGTAATGTATTTGGGAAAGAAGTTAATTTGC  100

seq1  TTCATGATCTGAAATGTTGAAGGTCAAGGATAGGGCAAGCTCAGGTAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATCTGAAATGTTGAAGGTCAAGGATAGGGCAAGCTCAGGTAGTC  150

seq1  AGGGACTTGTGATGTCTGATCCCAGGGTACACAGCAGAAGAATAACCGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACTTGTGATGTCTGATCCCAGGGTACACAGCAGAAGAATAACCGGA  200

seq1  TATTGTGGAAGACAGAGAGCAGAGGCTCCACTCTGCTTCTCAAGCACCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTGGAAGACAGAGAGCAGAGGCTCCACTCTGCTTCTCAAGCACCCA  250

seq1  TGATATGCTCACTGACCAGGCCTGCCACAGTGGGGAACAATACTCAACGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCTCACTGACCAGGCCTGCCACAGTGGGGAACAATACTCAACGT  300

seq1  GGCTATTGGTGTGTGCCTCATACATGTTAATGCATAGGTGGCCCTTCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTGGTGTGTGCCTCATACATGTTAATGCATAGGTGGCCCTTCCTT  350

seq1  CGGACATGTTGGTTTTTGATGCAGATTGAGTATTTAGGAGACAAATTACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGACATGTTGGTTTTTGATGCAGATTGAGTATTTAGGAGACAAATTACC  400

seq1  CAGGCAGGTGGAGAAAATGTGTTATAGGTAATGAGGGCAGACCATATGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAGGTGGAGAAAATGTGTTATAGGTAATGAGGGCAGACCATATGAA  450

seq1  GGCCCTGCCTTTTGCTTGTGTCACACTTACAGAGAAAGGGTGTCATACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTGCCTTTTGCTTGTGTCACACTTACAGAGAAAGGGTGTCATACCT  500

seq1  AGTATAAAGTCTCTGCAAATGACAAACACAGTGTTGAAATGGTAAATTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGTCTCTGCAAATGACAAACACAGTGTTGAAATGGTAAATTGC  550

seq1  AGGTACAGGTTTACACAGAGCAATCAGATGACCAGCAAAGTTGAAAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACAGGTTTACACAGAGCAATCAGATGACCAGCAAAGTTGAAAGAAA  600

seq1  TGATGTGAAAGTACATGGTACTTTCCACCTGTGATCCCCATTTGTGGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTGAAAGTACATGGTACTTTCCACCTGTGATCCCCATTTGTGGGAA  650

seq1  GCTGAGGTAGGTGTGCCCCAGTTACCTGTCTCGATCTCCTTAATCACAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGGTAGGTGTGCCCCAGTTACCTGTCTCGATCTCCTTAATCACAAA  700

seq1  GATAAAAATTGTGCTCAGGTA-GGGGGTTGTTCTACCAAGTTGGCTTCCA  749
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GATAAAAATTGTGCTCAGGTAGGGGGGTTGTTCTACCAAGTTGGCTTCCA  750

seq1  CCTCTTCCTTGCCCTCCATGTTTGGCAACAGTGAGCAGAAG-TTGGCTCT  798
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CCTCTTCCTTGCCCTCCATGTTTGGCAACAGTGAGCAGAAGTTTGGCTCT  800

seq1  AAATGAAATATATTTTAGCTACCCTCTATAAAAGACACAAAGCC-TTGGT  847
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAATGAAATATATTTTAGCTACCCTCTATAAAAGACACAAAGCCTTTGGT  850

seq1  ACATTATTTGAAGAGCTATAAGCCTAAATTGGGTGGGTTCTGTACACTTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATTTGAAGAGCTATAAGCCTAAATTGGGTGGGTTCTGTACACTTT  900

seq1  TAACTTATAT-CCAATTCATAAGCCCCATGTTACTTGCTGTCCAAGTGTC  946
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAACTTATATCCCAATTCATAAGCCCCATGTTACTTGCTGTCCAAGTGTC  950

seq1  ACCCAGGATTA-TTTCTGCTCCATCAATCTGCCCGAATGGTCCACT-GAT  994
      ||||||||||| |||||||| ||||||||||||||||||||||||| |||
seq2  ACCCAGGATTATTTTCTGCT-CATCAATCTGCCCGAATGGTCCACTGGAT  999

seq1  CCTGGTAATATGCTTTTGAGCCATCAAACCTCATGG--CAGCCTTCCCCT  1042
      ||||||||||||||||||||||||||||||||||||   |||||| || |
seq2  CCTGGTAATATGCTTTTGAGCCATCAAACCTCATGGGCAAGCCTT-CCGT  1048

seq1  CTCTC-TATCTTCTTTATCC-TCCT-CTCTACTCTTCTATTGCCTTCT-G  1088
      ||||| |||||    ||||| |||| |||||||||   || ||||||| |
seq2  CTCTCGTATCT--CGTATCCTTCCTCCTCTACTCTCTAATGGCCTTCTGG  1096

seq1  ATTCTTAT  1096
      ||||||||
seq2  ATTCTTAT  1104