BAC Information

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BAC

Clone NameB6Ng01-271H15
Chromosome7 (Build37)
Map Location 28,662,201 - 28,663,206
singlet/doubletsinglet
Overlap gene4732475C15Rik
Upstream geneEG233005, EG330491, Cyp2a12, LOC100043199, Cyp2f2, Gm1450, Egln2, Rab4b, Mia1, Snrpa, Itpkc, Adck4, Numbl, Ltbp4, Shkbp1, Spnb4, Blvrb, EG668045, Sertad3, Sertad1, Prx, Hipk4, Pld3, 2310022A10Rik, Akt2, Ttc9b, Map3k10, C030039L03Rik, Zfp60, LOC100043229, LOC100043233, 4933426I21Rik, Zfp59
Downstream genePrkcz2, 1700049G17Rik, EG668175, LOC100043771, Zfp780b, C130069I09Rik, LOC100043772, Psmc4, LOC100043774, 9530053A07Rik, Fbl, Dyrk1b, Eid2, LOC434156, BC089491, Dll3, Timm50, Supt5h, Rps16, Plekhg2, Zfp36, Ixl, Paf1, Samd4b, 1700085B13Rik, Gmfg, Lrfn1, LOC624672, 1700028B04Rik, EG330496, Il28, Sycn, 1190020J12Rik, Pak4, C330005M16Rik, Fbxo27, Fbxo17, Mrps12, Sars2, EG624918, Nfkbib, Sirt2, 5830482F20Rik, Hnrpl, Ech1, Lgals4, Lgals7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271H15.bB6Ng01-271H15.g
ACCGA073548GA073549
length1,2201,003
definitionB6Ng01-271H15.b B6Ng01-271H15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttatttagctctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttagatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgaaggtgtcttttgccttgcagaagctttgcaatttta
tgaggttccatttgttgattgtctttcttacagcataagccattactgtt
ttattcagaaatttttcccctgtacccatctcttcgaggcttttccctac
tttctcctctataaggttcagtgtctctggctatatgtggagttccttaa
tccacttagatttgtccttagtacaaggagataagaatggatcaattcgc
attcttctatatgataaccaccagttgtgccagcaccatttgttgaaaat
gctgtcttttttccactggatggtttttgctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattgtattccattgg
tttacttgtctgtcgctataccagtaccatgcagtttttatcacaattgc
tctgtagtacagctttaggtcaggcatggtgattccaccagaggttcctt
tattcttgagaagagtttttgctattctaggttttttgttattccagatg
aatttggagattgccctttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttactatattaatcctggcaatccatgagcaggggagatctttccatctt
ctgagatcttcttttatttctttctttagagttttgaagttcttatcata
cagatctttcacttccttagttagagccacgcccaaggtattttatatta
tttgtgacttgagaaggtgttgtttccctaatttcttcctcagcctgttt
atcctttgtgtagaggaaggtcatgacttgttgagttaatattattattc
cagctactcattcgaagcagcttgatcatgcatgactgaaggagcttctg
ctggagtattttttgaggggctcacctaacatatactatccattcacttg
gcaaaggcgatatttggactctcggcttcccaatatgcataccctgctga
atctcacttatgcgttagcg
gaattccaaatccagaccagttttcttaaggggtgatacatattacatat
ttgtttggtatagaattttattcatgatttggtttaaacacctttattga
agggtatgtatttcctgtagaatggaaagaggcatttaagattatttcag
tatagttagatgtaatttcattacgcagacatttcttccacttccaacct
gttgtactataaagagtatttctttttctttttttttttttttttttttt
tttggtttttttgagacaaggtttctctgtatagtcttggctgtcctgga
actcagtttgtagaccaggctggcctcgaactcagaaatccacctgtctc
tgcctcccaagtgctgggattaaaggcgtgtgccaccaccgcccggcaag
agtatttctttacatacatttttgctattgttgctctccttgctcctgtt
tagcttctcagaaaatactttacagcctggccatttatttagtggacttt
atggtataagaaaattgtgtatgtgcaggtgcaggtgcatgtaacaggaa
gataaaagagtcttgctttctcttttcctttcagatttggagttatgtta
tgaagctgaaaatatgtctccagaaaatcaaacctatgatataaatttat
tcaaacagagaataaagcaattcagtaaaacttttgatctcaagatttgc
agttttactagtggccccaactataatacatcccaagggactacagagtt
ctcaagaaaggcgatgataatcaaaagattactaacaaggaagaaatacc
cactcacacctgccagactcttgctcacaatacagaaaaggcatatgagt
gtaaagagtgtgggaagtgctttgggttgtagtcaactcttactcagcat
cagagtgtcatgctggagagaaccctatgaatgtgagaggtgtgggtagg
cttcagacttccctcacagctcacaagacatcgaaggtctccagtggtgg
aga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_28662201_28663206
seq2: B6Ng01-271H15.g_63_1065

seq1  GAATTCCAAATCCAGACCAGTTTTCTTAAGGGGTGATACATATTACATAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATCCAGACCAGTTTTCTTAAGGGGTGATACATATTACATAT  50

seq1  TTGTTTGGTATAGAATTTTATTCATGATTTGGTTTAAACACCTTTATTGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGGTATAGAATTTTATTCATGATTTGGTTTAAACACCTTTATTGA  100

seq1  AGGGTATGTATTTCCTGTAGAATGGAAAGAGGCATTTAAGATTATTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTATGTATTTCCTGTAGAATGGAAAGAGGCATTTAAGATTATTTCAG  150

seq1  TATAGTTAGATGTAATTTCATTACGCAGACATTTCTTCCACTTCCAACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTTAGATGTAATTTCATTACGCAGACATTTCTTCCACTTCCAACCT  200

seq1  GTTGTACTATAAAGAGTATTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTACTATAAAGAGTATTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTT  250

seq1  TTTGGTTTTTTTGAGACAAGGTTTCTCTGTATAGTCTTGGCTGTCCTGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGTTTTTTTGAGACAAGGTTTCTCTGTATAGTCTTGGCTGTCCTGGA  300

seq1  ACTCAGTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGTTTGTAGACCAGGCTGGCCTCGAACTCAGAAATCCACCTGTCTC  350

seq1  TGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCGCCCGGCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCCAAGTGCTGGGATTAAAGGCGTGTGCCACCACCGCCCGGCAAG  400

seq1  AGTATTTCTTTACATACATTTTTGCTATTGTTGCTCTCCTTGCTCCTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTCTTTACATACATTTTTGCTATTGTTGCTCTCCTTGCTCCTGTT  450

seq1  TAGCTTCTCAGAAAATACTTTACAGCCTGGCCATTTATTTAGTGGACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTTCTCAGAAAATACTTTACAGCCTGGCCATTTATTTAGTGGACTTT  500

seq1  ATGGTATAAGAAAATTGTGTATGTGCAGGTGCAGGTGCATGTAACAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTATAAGAAAATTGTGTATGTGCAGGTGCAGGTGCATGTAACAGGAA  550

seq1  GATAAAAGAGTCTTGCTTTCTCTTTTCCTTTCAGATTTGGAGTTATGTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAAAGAGTCTTGCTTTCTCTTTTCCTTTCAGATTTGGAGTTATGTTA  600

seq1  TGAAGCTGAAAATATGTCTCCAGAAAATCAAACCTATGATATAAATTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTGAAAATATGTCTCCAGAAAATCAAACCTATGATATAAATTTAT  650

seq1  TCAAACAGAGAATAAAGCAATTCAGTAAAACTTTTGATCTCAAGATTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACAGAGAATAAAGCAATTCAGTAAAACTTTTGATCTCAAGATTTGC  700

seq1  AGTTTTACTAGTGGCCCCAACTATAATACAT-CCAAGGGACTACAGAGTT  749
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  AGTTTTACTAGTGGCCCCAACTATAATACATCCCAAGGGACTACAGAGTT  750

seq1  CTCAAG-AAGGCGATGATAATCAAAAGATTACTAACAAGGAAGAAATACC  798
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGAAAGGCGATGATAATCAAAAGATTACTAACAAGGAAGAAATACC  800

seq1  CACTCACACCTGCCAGACTCTTGCTCACAATACAGAAAAGGCATATGAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCACACCTGCCAGACTCTTGCTCACAATACAGAAAAGGCATATGAGT  850

seq1  GTAAAGAGTGTGGGAAGTGCTTT-GGTTGTAGGTCAACTCTTACTCAGCA  897
      ||||||||||||||||||||||| ||||||| ||||||||||||||||||
seq2  GTAAAGAGTGTGGGAAGTGCTTTGGGTTGTA-GTCAACTCTTACTCAGCA  899

seq1  TCAGAGTGTTCATGCTGGAGAGAAACCCTATGAATGTGAGGAGTGTGGGA  947
      |||||||| ||||||||||||| |||||||||||||||||  ||||||| 
seq2  TCAGAGTG-TCATGCTGGAGAG-AACCCTATGAATGTGAGAGGTGTGGGT  947

seq1  AGGCCTTCAGACTCCCCCAACAGCTCACAAGACATCAGAAGTCTCACAGT  997
      ||| ||||||||| |||  |||||||||||||||||  | ||||| ||||
seq2  AGG-CTTCAGACTTCCCTCACAGCTCACAAGACATCGAAGGTCTC-CAGT  995

seq1  GGTGAGAGA  1006
      |||| ||||
seq2  GGTG-GAGA  1003