BAC Information

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BAC

Clone NameB6Ng01-271O22
Chromosome7 (Build37)
Map Location 32,199,459 - 32,200,634
singlet/doubletsinglet
Overlap genenone
Upstream geneTyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331
Downstream geneLOC626181, LOC100043334, LOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-271O22.bB6Ng01-271O22.g
ACCGA073886GA073887
length1,1871,158
definitionB6Ng01-271O22.b B6Ng01-271O22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaacatgataaaagcaatctacaggaaacca
ttagccaacatcaagttaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgtagtattagccagagcaattcgacaacaaaaggagttcaagggg
atacaaattggaaaagaggaagtcaaaatatcactctttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacaccttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataagcaggctgagaaagaaattag
ggaaacaacaccattctcaatagtcacaaataacataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagatctcagaagatggaaagatctcccatgctc
atggattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaa
tctacagattcaatgcaatccccatcaaaattccaactcaattcttcaac
gaatttgaaggagcaatttgcaaattcatctggaataaccaaaaacctag
gatagcaaaaactcttctcaaggataaaagaacctctggtgcaatcacca
tgcttgacctaaagctttactacagagcaattgtgataaaaactgcatgg
tactggtatagagacagacaagtagaccaatggaacagaattgaagaccc
agaaatgaacccacacacctctggtcacttgatcttcgacaagcgagcta
aaaccatccagtggaagaaagacagcattttcaacaattggtgctggcac
aactgggttgtatcatgtagaagaatgcgaatcgaaccatcttctcctct
gtactaagtcaatctaagtggatcaggacttcacataaaccagaacactg
aaacttaatagagagaaggtgggggaagcttggagatatggcacaggggt
aaatctggacgaacagcaatgccttggcctgagatcgagaaactgacaat
tggaacttatggaacctcccaaagtatctgtccaagc
gaattccttatgaccatgattaagatttcaagtttaatttccttctgata
agaaaccattcagctagcacctgagattcctgaaattattccccatgcta
tagggtattttggtacctctagccctccagcaatgacctttgccaggatt
tttccgcttctaaatttaaattagtttgaacgtccataggcattttgggg
ttttcctttcccaaaaggtcacccaataattcagggggttctagaactac
tcatctcaatatccatcactatgcaggtggcatttgtcattttcttcacc
ttcctgaggatgctgaccaacatgtataaatcagtatcatggctgctttt
gcaaagctggaggaggatgtgtagggctaaagaatacacaggaacagaag
cagagctccagcaatggattctctctggtacaggattttgcctatggaaa
aagatctgatccttctaaggcaacttccaaaacattcaagaaaaataatg
atgttgcaggatgtggctgaaaagtaggaacgtagttaggcttataagaa
gctacagtggaacagctgtggcttcaaagtttcatgctccttgaaacttt
ccacacaaagtcacatctaatggggcattattatgagatggggctattgg
tgtgtgataagaatccactgtacattttgttatctactgtgtgggttctt
ctttcttccacactccctcatcctctttcttccaccattttaaactccta
acactagatgagagattttttgttcatttgtttttttctttttttttttg
tttgttttgaaaacaacatggaggggaaaggaaatagatcccagaataaa
gtcaggggtcagaaaggtggcaatattatcattagactacttattgataa
tttggcaatgacctccatgaggcatgttgatctttcttgtcaggatatat
gatttcttactattccatttgcactaactactaaagaccatgaccacaca
tcacaccttctcaagaacataacatatacagcttaaattgtcccagaatc
ctaccattcacaaatccaccattctatcacagatggccaattatgccgtt
ctgaacgtgaagcaatcatagtcatgcacagtggaaaagtgtgaaaggca
ctctcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32199459_32200634
seq2: B6Ng01-271O22.g_65_1222 (reverse)

seq1  TTTGAGGGGTGCC--TCACA-TTTTCCACTGT-CATGACTATGATTTGCT  46
      ||||| | |||||  ||||| ||||||||||| ||||||||||| |||||
seq2  TTTGA-GAGTGCCTTTCACACTTTTCCACTGTGCATGACTATGA-TTGCT  48

seq1  TCACTGTCTAGAACAGGCATAATTTTGCCATCTGTGGATAGAATGTGTGA  96
      |||| ||  ||||| ||||||| || ||||||||| |||||||||   ||
seq2  TCAC-GTTCAGAAC-GGCATAA-TTGGCCATCTGT-GATAGAATGGTGGA  94

seq1  TTTGTGATGTGTAGAATTCTGGGGACATTTTAAGGCTGTATAATTGTTAT  146
      |||||||   |||| ||||| |||||| ||||| ||||||||  ||||||
seq2  TTTGTGAATGGTAGGATTCT-GGGACAATTTAA-GCTGTATA--TGTTAT  140

seq1  GGTCCTGAGAAGGGTGGTTGATTGTTGT-TGGTCATGGTCTTTTAAGTAG  195
      | || ||||||||     ||  || ||| ||||||||||||||  |||||
seq2  GTTCTTGAGAAGG-----TG--TGATGTGTGGTCATGGTCTTT--AGTAG  181

seq1  TTAGGTGCAAAATGGAAATAGTAAGAAATCATATATCCTGACAAGAAAGA  245
      ||| |||| |||||| ||||||||||||||||||||||||||||||||||
seq2  TTA-GTGC-AAATGG-AATAGTAAGAAATCATATATCCTGACAAGAAAGA  228

seq1  TCAACATTGCCTCATGGAGGTCATTGCCCAAATTATCAATAAGTAGTCTA  295
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  TCAACA-TGCCTCATGGAGGTCATTG-CCAAATTATCAATAAGTAGTCTA  276

seq1  ATGATAATATTGCCACCTTTCTGACCCCTGACTTTATTCTGGGATCTATT  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATAATATTGCCACCTTTCTGACCCCTGACTTTATTCTGGGATCTATT  326

seq1  TCCTTTCCCCTCCATGTTGTTTTCAAAACAAAC-AAAAAAAAAAGAAAAA  394
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTTTCCCCTCCATGTTGTTTTCAAAACAAACAAAAAAAAAAAGAAAAA  376

seq1  AACAAATGAACAAAAAATCTCTCATCTAGTGTTAGGAGTTTAAAATGGTG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATGAACAAAAAATCTCTCATCTAGTGTTAGGAGTTTAAAATGGTG  426

seq1  GAAGAAAGAGGATGAGGGAGTGTGGAAGAAAGAAGAACCCACACAGTAGA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAAGAGGATGAGGGAGTGTGGAAGAAAGAAGAACCCACACAGTAGA  476

seq1  TAACAAAATGTACAGTGGATTCTTATCACACACCAATAGCCCCATCTCAT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAATGTACAGTGGATTCTTATCACACACCAATAGCCCCATCTCAT  526

seq1  AATAATGCCCCATTAGATGTGACTTTGTGTGGAAAGTTTCAAGGAGCATG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGCCCCATTAGATGTGACTTTGTGTGGAAAGTTTCAAGGAGCATG  576

seq1  AAACTTTGAAGCCACAGCTGTTCCACTGTAGCTTCTTATAAGCCTAACTA  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTGAAGCCACAGCTGTTCCACTGTAGCTTCTTATAAGCCTAACTA  626

seq1  CGTTCCTACTTTTCAGCCACATCCTGCAACATCATTATTTTTCTTGAATG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCCTACTTTTCAGCCACATCCTGCAACATCATTATTTTTCTTGAATG  676

seq1  TTTTGGAAGTTGCCTTAGAAGGATCAGATCTTTTTCCATAGGCAAAATCC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAAGTTGCCTTAGAAGGATCAGATCTTTTTCCATAGGCAAAATCC  726

seq1  TGTACCAGAGAGAATCCATTGCTGGAGCTCTGCTTCTGTTCCTGTGTATT  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACCAGAGAGAATCCATTGCTGGAGCTCTGCTTCTGTTCCTGTGTATT  776

seq1  CTTTAGCCCTACACATCCTCCTCCAGCTTTGCAAAAGCAGCCATGATACT  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAGCCCTACACATCCTCCTCCAGCTTTGCAAAAGCAGCCATGATACT  826

seq1  GATTTATACATGTTGGTCAGCATCCTCAGGAAGGTGAAGAAAATGACAAA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATACATGTTGGTCAGCATCCTCAGGAAGGTGAAGAAAATGACAAA  876

seq1  TGCCACCTGCATAGTGATGGATATTGAGATGAGTAGTTCTAGAACCCCCT  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCACCTGCATAGTGATGGATATTGAGATGAGTAGTTCTAGAACCCCCT  926

seq1  GAATTATTGGGTGACCTTTTGGGAAAGGAAAACCCCAAAATGCCTATGGA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTATTGGGTGACCTTTTGGGAAAGGAAAACCCCAAAATGCCTATGGA  976

seq1  CGTTCAAACTAATTTAAATTTAGAAGCGGAAAAATCCTGGCAAAGGTCAT  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCAAACTAATTTAAATTTAGAAGCGGAAAAATCCTGGCAAAGGTCAT  1026

seq1  TGCTGGAGGGCTAGAGGTACCAAAATACCCTATAGCATGGGGAATAATTT  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAGGGCTAGAGGTACCAAAATACCCTATAGCATGGGGAATAATTT  1076

seq1  CAGGAATCTCAGGTGCTAGCTGAATGGTTTCTTATCAGAAGGAAATTAAA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCTCAGGTGCTAGCTGAATGGTTTCTTATCAGAAGGAAATTAAA  1126

seq1  CTTGAAATCTTAATCATGGTCATAAGGAATTC  1176
      ||||||||||||||||||||||||||||||||
seq2  CTTGAAATCTTAATCATGGTCATAAGGAATTC  1158