BAC Information

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BAC

Clone NameB6Ng01-272G03
Chromosome7 (Build37)
Map Location 117,240,256 - 117,368,870
singlet/doubletdoublet
Overlap geneWee1, Swap70
Upstream geneLmo1, Stk33, EG668320, 1700095J03Rik, Trim66, Rpl27a, St5, LOC100042582, D930014E17Rik, BC051019, Ascl3, Tmem9b, 4930431P19Rik, Nrip3, Scube2, Phxr5, Rab6ip1, Tmem41b, Ipo7, AA474408, Zfp143
Downstream geneEG668368, Sbf2, LOC668246, Adm, B430319F04Rik, Ampd3, Rnf141, Xlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-272G03.bB6Ng01-272G03.g
ACCGA074225GA074226
length1,031887
definitionB6Ng01-272G03.b B6Ng01-272G03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,240,256 - 117,241,291)(117,367,982 - 117,368,870)
sequence
gaattcactctgtagaccaggctggcctcaaactcagaaattcgcctgcc
tcggcattctcttttctttaactggagttacagacatgattgtgagccac
catgtgggtgctggaaattgaacccaggttctcccaaagagcagtcagta
ttcttgctgagccatatctctgtccccctaatcagtaaatttacaaagag
ggaaggcacagttgcatacagtttgtgctccacatgatttctacaagcct
caagactcagaaggttgggggtctacaaggcaagtccagaaatattacac
aggggtactactctggaggaaaaaaaaagttatgtgtatatgtgtgcctg
agtgtgagtttgtgcacatgagtatgtttgccataggagaaattggatcc
cctgaagctggaatcgtgggtcgcctggtaagtgttagggactgaactca
ggtcttctacaacataccaatcactgagccatctctccacctcacccttt
gaagttcttacatcttttttttttcttttggctgggaggggtggatgtcc
gtgtggttggtcaggcagtgtttccatgtcacggggctcagagttgtttc
cttccccaagacaaggacgactaggcagtagctcattattttgctgatag
atgagttttacaatatgaattgtttcttccacggtattgtgcattgcagc
aaaggtcatgataagtcaaactcccaatactctgagcctgctcagtaaag
actggcttcttcagtagtgtcaggaagccctaggagagactgcagccagg
ccttgttaaagagtaactaactccttttgatcctggttggaggcagcaga
accttactcttgagcagaggacaagcagtcttactgagattagcttagca
cttagcttattcccaccaccacagagtggcacccacactcccaaacagat
tagcaggtcacatcactgaagaggacaaggtcatcttgtcgagctagtca
gcactgagtaggattgttggaggaagagaga
gaattccaggacagccagggctacacaaagaaaccctctttcaggagaaa
aaaaaaaagataaacaaaacatggtttccatctacagtctgagcacctga
aagggagagacaggaagatggctgtaagtttaaagcctacctaatctact
acacagcaagttctagcccattgagagatatacagaaagattctgtctga
aaaataaaatatatacattataaatggaagtatagctcagtgataaagag
cttgcttagaatgtagtaagccctgggctcaattttcagtactacaaaag
taggagcagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaagtgtttggg
ggcctgaattcaatccctagctcctatgtgaaaatacccatcatggtggt
atgtgcttataatttgagcactgggaaggtggagacaggagtatttcctg
gggctcagcagccaaccagtatagtctagtctagtctaatttgtaagctc
aagccagtgaaagacctaagggagggaggtacatggcattcctaaggatg
gcacctgaggcttttttgtcttccataactaccatgaacccatgtgtacc
cacacacaagaacacatgcatgcacagataaatacacttttttatttttt
cagtaaaacgagggctagaggtatagcttaggtagagtgttcgcctagta
tgctgggtcccatcccccatatagagaagaaaaaaatcctaacagcctac
aactactaaccttttattaaattaacatagtaccttatacacaaatcact
cattaacttccaaaacacacctttcccccattgaaatggagtcagacacc
aagaaaaatattaatttaaatattttcagttccaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_117240256_117241291
seq2: B6Ng01-272G03.b_46_1076

seq1  GAATTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATTCGCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATTCGCCTGCC  50

seq1  TCGGCATTCTCTTTTCTTTAACTGGAGTTACAGACATGATTGTGAGCCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGCATTCTCTTTTCTTTAACTGGAGTTACAGACATGATTGTGAGCCAC  100

seq1  CATGTGGGTGCTGGAAATTGAACCCAGGTTCTCCCAAAGAGCAGTCAGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGGGTGCTGGAAATTGAACCCAGGTTCTCCCAAAGAGCAGTCAGTA  150

seq1  TTCTTGCTGAGCCATATCTCTGTCCCCCTAATCAGTAAATTTACAAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCTGAGCCATATCTCTGTCCCCCTAATCAGTAAATTTACAAAGAG  200

seq1  GGAAGGCACAGTTGCATACAGTTTGTGCTCCACATGATTTCTACAAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGCACAGTTGCATACAGTTTGTGCTCCACATGATTTCTACAAGCCT  250

seq1  CAAGACTCAGAAGGTTGGGGGTCTACAAGGCAAGTCCAGAAATATTACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTCAGAAGGTTGGGGGTCTACAAGGCAAGTCCAGAAATATTACAC  300

seq1  AGGGGTACTACTCTGGAGGAAAAAAAAAGTTATGTGTATATGTGTGCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTACTACTCTGGAGGAAAAAAAAAGTTATGTGTATATGTGTGCCTG  350

seq1  AGTGTGAGTTTGTGCACATGAGTATGTTTGCCATAGGAGAAATTGGATCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGAGTTTGTGCACATGAGTATGTTTGCCATAGGAGAAATTGGATCC  400

seq1  CCTGAAGCTGGAATCGTGGGTCGCCTGGTAAGTGTTAGGGACTGAACTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCTGGAATCGTGGGTCGCCTGGTAAGTGTTAGGGACTGAACTCA  450

seq1  GGTCTTCTACAACATACCAATCACTGAGCCATCTCTCCACCTCACCCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTCTACAACATACCAATCACTGAGCCATCTCTCCACCTCACCCTTT  500

seq1  GAAGTTCTTACATCTTTTTTTTTTCTTTTGGCTGGGAGGGGTGGATGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTCTTACATCTTTTTTTTTTCTTTTGGCTGGGAGGGGTGGATGTCC  550

seq1  GTGTGGTTGGTCAGGCAGTGTTTCCATGTCACGGGGCTCAGAGTTGTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTTGGTCAGGCAGTGTTTCCATGTCACGGGGCTCAGAGTTGTTTC  600

seq1  CTTCCCCAAGACAAGGACGACTAGGCAGTAGCTCATTATTTTGCTGATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAAGACAAGGACGACTAGGCAGTAGCTCATTATTTTGCTGATAG  650

seq1  ATGAGTTTTACAATATGAATTGTTTCTTCCACGGTATTGTGCATTGCAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTTTTACAATATGAATTGTTTCTTCCACGGTATTGTGCATTGCAGC  700

seq1  AAAGGTCATGATAAGTCAAACTCCCAATACTCTGAGCCTGCTCAGTAAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTCATGATAAGTCAAACTCCCAATACTCTGAGCCTGCTCAGTAAAG  750

seq1  ACTGGCTTCTTCAGTAGTGTCAGGAAGCCCTAGGAGAGACTGCAGCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCTTCTTCAGTAGTGTCAGGAAGCCCTAGGAGAGACTGCAGCCAGG  800

seq1  CCTTGTTAAAGAGTAACTAACTCCTTTTGATCCTGGTTGGAGGCAGCAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTTAAAGAGTAACTAACTCCTTTTGATCCTGGTTGGAGGCAGCAGA  850

seq1  ACCTTACTCTTGAGCAGAGGACAAGCAGTCTTACTGAGATTAGCTTAGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACTCTTGAGCAGAGGACAAGCAGTCTTACTGAGATTAGCTTAGCA  900

seq1  CTTAGCTTATTCCCACCACCACAGAGTGGCACCCACACTCCCCAAACAGA  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTAGCTTATTCCCACCACCACAGAGTGGCACCCACACT-CCCAAACAGA  949

seq1  TTAGCAAGGTCACATCACTGAAGAGGACAAAGGTCATCTTGTCGAGCTAA  1000
      ||||| |||||||||||||||||||||| ||||||||||||||||||| |
seq2  TTAGC-AGGTCACATCACTGAAGAGGAC-AAGGTCATCTTGTCGAGCT-A  996

seq1  GTCAGCACTGAGTAGGATTGTTGGAGGAGAGAGAGA  1036
      |||||||||||||||||||||||||||| |||||||
seq2  GTCAGCACTGAGTAGGATTGTTGGAGGA-AGAGAGA  1031

seq1: chr7_117367982_117368870
seq2: B6Ng01-272G03.g_65_951 (reverse)

seq1  TTTTGGAACTGAAAATATTTTAACTTAATTTTTTTCTTGGTGTCTGACTC  50
      ||||||||||||||||| ||||| ||||| ||||||||||||||||||||
seq2  TTTTGGAACTGAAAATA-TTTAAATTAATATTTTTCTTGGTGTCTGACTC  49

seq1  CATTTCATTGGGGGAAAGGTGTGTTTTGGAA-CTAATGTGTTGATTTGTG  99
      ||||||| |||||||||||||||||||||||  ||||| | |||||||||
seq2  CATTTCAATGGGGGAAAGGTGTGTTTTGGAAGTTAATGAG-TGATTTGTG  98

seq1  TATAAGGTACTATGTTAATTTAATAAAAGGTTAGTAGTTGTAGGCTGTTA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGGTACTATGTTAATTTAATAAAAGGTTAGTAGTTGTAGGCTGTTA  148

seq1  GGATTTTTTTCTTCTCTATATTGGGGATGGGACCCAGCATACTAGGCGAA  199
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GGATTTTTTTCTTCTCTATATGGGGGATGGGACCCAGCATACTAGGCGAA  198

seq1  CACTCTACCCTAAGCTATACCTCTAGCCCTCGTTTTACTGAAAAAATAAA  249
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTA-CCTAAGCTATACCTCTAGCCCTCGTTTTACTGAAAAAATAAA  247

seq1  AAAGTGTATTTATCTGTGCATGCATGTGTTCTTGTGTGTGGGTACACATG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGTATTTATCTGTGCATGCATGTGTTCTTGTGTGTGGGTACACATG  297

seq1  GGTTCATGGTAGTTATGGAAGACAAAAAAGCCTCAGGTGCCATCCTTAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCATGGTAGTTATGGAAGACAAAAAAGCCTCAGGTGCCATCCTTAGG  347

seq1  AATGCCATGTACCTCCCTCCCTTAGGTCTTTCACTGGCTTGAGCTTACAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCATGTACCTCCCTCCCTTAGGTCTTTCACTGGCTTGAGCTTACAA  397

seq1  ATTAGACTAGACTAGACTATACTGGTTGGCTGCTGAGCCCCAGGAAATAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACTAGACTAGACTATACTGGTTGGCTGCTGAGCCCCAGGAAATAC  447

seq1  TCCTGTCTCCACCTTCCCAGTGCTCAAATTATAAGCACATACCACCATGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTCTCCACCTTCCCAGTGCTCAAATTATAAGCACATACCACCATGA  497

seq1  TGGGTATTTTCACATAGGAGCTAGGGATTGAATTCAGGCCCCCAAACACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTATTTTCACATAGGAGCTAGGGATTGAATTCAGGCCCCCAAACACT  547

seq1  TTACACACACACACACACACACACACACACACTGCTCCTACTTTTGTAGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACACACACACACACACACACACACACACTGCTCCTACTTTTGTAGT  597

seq1  ACTGAAAATTGAGCCCAGGGCTTACTACATTCTAAGCAAGCTCTTTATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAAATTGAGCCCAGGGCTTACTACATTCTAAGCAAGCTCTTTATCA  647

seq1  CTGAGCTATACTTCCATTTATAATGTATATATTTTATTTTTCAGACAGAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTATACTTCCATTTATAATGTATATATTTTATTTTTCAGACAGAA  697

seq1  TCTTTCTGTATATCTCTCAATGGGCTAGAACTTGCTGTGTAGTAGATTAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGTATATCTCTCAATGGGCTAGAACTTGCTGTGTAGTAGATTAG  747

seq1  GTAGGCTTTAAACTTACAGCCATCTTCCTGTCTCTCCCTTTCAGGTGCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGCTTTAAACTTACAGCCATCTTCCTGTCTCTCCCTTTCAGGTGCTC  797

seq1  AGACTGTAGATGGAAACCATGTTTTGTTTATCTTTTTTTTTTTCTCCTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTAGATGGAAACCATGTTTTGTTTATCTTTTTTTTTTTCTCCTGA  847

seq1  AAGAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGGAATTC  889
      ||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGTTTCTTTGTGTAGCCCTGGCTGTCCTGGAATTC  887