BAC Information

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BAC

Clone NameB6Ng01-273F13
Chromosome7 (Build37)
Map Location 62,279,036 - 62,459,370
singlet/doubletdoublet
Overlap geneLuzp2
Upstream geneMrps33p, LOC622146
Downstream geneLOC668796, Siglech, Tubgcp5, Cyfip1, Nipa2, Nipa1, LOC672959, Herc2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273F13.bB6Ng01-273F13.g
ACCGA074945GA074946
length1,120669
definitionB6Ng01-273F13.b B6Ng01-273F13.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(62,279,036 - 62,280,168)(62,458,702 - 62,459,370)
sequence
gaattctacaacaggtttttttttcctgatttttagaaactataaagata
tctgtaacaaggaatatttcccgactctgcaagaatcctaagaccctggc
ctgagggagaccagtatgagaaatcaattctcttagctttggaatcacag
attttcttcaacagaattacagtgtttgaagttgctaagactccatttct
gtagtgcttagataatcattttgctataacttaataactgcgttcattgt
taattattaatggctattaattaaaattctggagacttgcactttcttga
aaacaggaagtttttgccaaatcttcatggtcaaaggacttttaaaacac
attctttgaaatatcctttaaaaacaaagaacctcacttcccaattctag
attttgcttttaatctgctttaaataaattatgttctatgaagcttactt
atgttgtgggctttttaactacacggattccattccaagtcactatatga
gtcctaaaagggatgtttgttgggtcattttggatttttgcaacattagt
aaaagtttaaaactatataacattgttcatgatttcaatttatttcctct
ctcatctacttcaaaatatcttcacatgatatgtgtttctacaagtttaa
tattctttttcatctatcacaaaggagaagtagaatgggagctaacattc
agaataggcttcataaactctgcaagcatgttttaggttccattatgcta
tctcatgccaaacaaaaaacctttgggcatcggggctacccgatgccatg
atctaaggtacaaggttgtttcaatctgaaatttatcatattctgtaagt
ccttacacttccatccagttgtagaagagaggcatgacttgaaatgtaaa
ggagcataaattagaaaatgtagacttatttaattaagtaggtggtaggt
tgaaaaatccacagtcacccatccatgcaggattctgttcagaaaaacat
agcccagcagttgcaacttgtcatgcacggagtttcactgcagttagaat
catcttgaatcatttccattgactacagaatacagaataattatgttttg
atatttaagtagaaaataaa
gaattcacatttaccagcatgttatcctggtttctaaagagcagttgtta
tatcagtacacacactgtgtctatattaaatacaggaaattactgtgaag
ggcacaacaccggaagacttatgatagtcaggacacttagccagaaagta
aactagttaatcatgttaactttataagtttacctgagaaaccataatgc
actaaacattacaaaacgatgccacctcataaagcccagtattgattcca
gagcagcttcccttctcacaaaatcaataactaagatttgtagatgaata
atattttccaagtatgaaacaaataagagtgaaaatacatttaaaattca
tgaacaattaaagttgccttgtgagattctaatagctaagccagagtaag
agttagaagcaaccgaagaagggaagttcagtcagtgttcctcagagagt
ccctttgacaacagcataaccacaccatccatttactcacaggtacactt
cacagggagctataaaatggatggagtgagaaagagctcatttcctggac
gaggtctcaatcctaagtggtcagacttaaatgcttgaaaataagggcaa
aatttactaggattggttctctctctctctctctctctctctctctctct
ctctctctctctctctctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_62279036_62280168
seq2: B6Ng01-273F13.b_46_1165

seq1  GAATTCTACAACAGGTTTTTTTTTCCTGATTTTTAGAAACTATAAAGATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACAACAGGTTTTTTTTTCCTGATTTTTAGAAACTATAAAGATA  50

seq1  TCTGTAACAAGGAATATTTCCCGACTCTGCAAGAATCCTAAGACCCTGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAACAAGGAATATTTCCCGACTCTGCAAGAATCCTAAGACCCTGGC  100

seq1  CTGAGGGAGACCAGTATGAGAAATCAATTCTCTTAGCTTTGGAATCACAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGAGACCAGTATGAGAAATCAATTCTCTTAGCTTTGGAATCACAG  150

seq1  ATTTTCTTCAACAGAATTACAGTGTTTGAAGTTGCTAAGACTCCATTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCTTCAACAGAATTACAGTGTTTGAAGTTGCTAAGACTCCATTTCT  200

seq1  GTAGTGCTTAGATAATCATTTTGCTATAACTTAATAACTGCGTTCATTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGCTTAGATAATCATTTTGCTATAACTTAATAACTGCGTTCATTGT  250

seq1  TAATTATTAATGGCTATTAATTAAAATTCTGGAGACTTGCACTTTCTTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAATGGCTATTAATTAAAATTCTGGAGACTTGCACTTTCTTGA  300

seq1  AAACAGGAAGTTTTTGCCAAATCTTCATGGTCAAAGGACTTTTAAAACAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGGAAGTTTTTGCCAAATCTTCATGGTCAAAGGACTTTTAAAACAC  350

seq1  ATTCTTTGAAATATCCTTTAAAAACAAAGAACCTCACTTCCCAATTCTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTTGAAATATCCTTTAAAAACAAAGAACCTCACTTCCCAATTCTAG  400

seq1  ATTTTGCTTTTAATCTGCTTTAAATAAATTATGTTCTATGAAGCTTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGCTTTTAATCTGCTTTAAATAAATTATGTTCTATGAAGCTTACTT  450

seq1  ATGTTGTGGGCTTTTTAACTACACGGATTCCATTCCAAGTCACTATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTGGGCTTTTTAACTACACGGATTCCATTCCAAGTCACTATATGA  500

seq1  GTCCTAAAAGGGATGTTTGTTGGGTCATTTTGGATTTTTGCAACATTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAAAAGGGATGTTTGTTGGGTCATTTTGGATTTTTGCAACATTAGT  550

seq1  AAAAGTTTAAAACTATATAACATTGTTCATGATTTCAATTTATTTCCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTAAAACTATATAACATTGTTCATGATTTCAATTTATTTCCTCT  600

seq1  CTCATCTACTTCAAAATATCTTCACATGATATGTGTTTCTACAAGTTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCTACTTCAAAATATCTTCACATGATATGTGTTTCTACAAGTTTAA  650

seq1  TATTCTTTTTCATCTATCACAAAGGAGAAGTAGAATGGGAGCTAACATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTTTTTCATCTATCACAAAGGAGAAGTAGAATGGGAGCTAACATTC  700

seq1  AGAATAGGCTTCATAAACTCTGCAAGCATGTTTTAGGTTCCATTATGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATAGGCTTCATAAACTCTGCAAGCATGTTTTAGGTTCCATTATGCTA  750

seq1  TCTCATGCCAAACAAAAAACCTTTGGGCATCGGGGCTACCCGATGCCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCCAAACAAAAAACCTTTGGGCATCGGGGCTACCCGATGCCATG  800

seq1  ATCTAAGGTACAAGGTTGTTTCAATCTGAAATTTATCATATTCTGTAAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAGGTACAAGGTTGTTTCAATCTGAAATTTATCATATTCTGTAAGT  850

seq1  CCTTACACTTCCATCCAGTTGTAGAAGAGAGGCATGACTTGAAATGTAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTACACTTCCATCCAGTTGTAGAAGAGAGGCATGACTTGAAATGTAAA  900

seq1  GGAGCATAAATTAGAAAATGTAGACTTATTTAATTAAGTAGGTGGTAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATAAATTAGAAAATGTAGACTTATTTAATTAAGTAGGTGGTAGGT  950

seq1  TGAAAAATCCCACAGTCACCCATCCATGCAGGATTCTGTTCAGGAAAAAC  1000
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  TGAAAAAT-CCACAGTCACCCATCCATGCAGGATTCTGTTCA-GAAAAAC  998

seq1  ATAGCCCAGCAGTTGCAAACTTGTCATGCACGGAAGTTTCCACTGCAGTT  1050
      |||||||||||||||| |||||||||||||||| ||||| ||||||||||
seq2  ATAGCCCAGCAGTTGC-AACTTGTCATGCACGG-AGTTT-CACTGCAGTT  1045

seq1  AGAATCATCTTGAATCATTTCCCATTGGAACTTACAAGATACAGAATTTA  1100
      |||||||||||||||||||| ||||||  || ||||  |||||||| | |
seq2  AGAATCATCTTGAATCATTT-CCATTG--AC-TACAGAATACAGAA-TAA  1090

seq1  TTATGTTTTTGTATATTTAAAGGTAG-AAATAAA  1133
      |||||||||   ||||||||  |||| |||||||
seq2  TTATGTTTT--GATATTTAA--GTAGAAAATAAA  1120

seq1: chr7_62458702_62459370
seq2: B6Ng01-273F13.g_68_736 (reverse)

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  50

seq1  GAACCAATCCTAGTAAATTTTGCCCTTATTTTCAAGCATTTAAGTCTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAATCCTAGTAAATTTTGCCCTTATTTTCAAGCATTTAAGTCTGAC  100

seq1  CACTTAGGATTGAGACCTCGTCCAGGAAATGAGCTCTTTCTCACTCCATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTAGGATTGAGACCTCGTCCAGGAAATGAGCTCTTTCTCACTCCATC  150

seq1  CATTTTATAGCTCCCTGTGAAGTGTACCTGTGAGTAAATGGATGGTGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATAGCTCCCTGTGAAGTGTACCTGTGAGTAAATGGATGGTGTGG  200

seq1  TTATGCTGTTGTCAAAGGGACTCTCTGAGGAACACTGACTGAACTTCCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGCTGTTGTCAAAGGGACTCTCTGAGGAACACTGACTGAACTTCCCT  250

seq1  TCTTCGGTTGCTTCTAACTCTTACTCTGGCTTAGCTATTAGAATCTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCGGTTGCTTCTAACTCTTACTCTGGCTTAGCTATTAGAATCTCACA  300

seq1  AGGCAACTTTAATTGTTCATGAATTTTAAATGTATTTTCACTCTTATTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAACTTTAATTGTTCATGAATTTTAAATGTATTTTCACTCTTATTTG  350

seq1  TTTCATACTTGGAAAATATTATTCATCTACAAATCTTAGTTATTGATTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATACTTGGAAAATATTATTCATCTACAAATCTTAGTTATTGATTTT  400

seq1  GTGAGAAGGGAAGCTGCTCTGGAATCAATACTGGGCTTTATGAGGTGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGAAGGGAAGCTGCTCTGGAATCAATACTGGGCTTTATGAGGTGGCA  450

seq1  TCGTTTTGTAATGTTTAGTGCATTATGGTTTCTCAGGTAAACTTATAAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTTTGTAATGTTTAGTGCATTATGGTTTCTCAGGTAAACTTATAAAG  500

seq1  TTAACATGATTAACTAGTTTACTTTCTGGCTAAGTGTCCTGACTATCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATGATTAACTAGTTTACTTTCTGGCTAAGTGTCCTGACTATCATA  550

seq1  AGTCTTCCGGTGTTGTGCCCTTCACAGTAATTTCCTGTATTTAATATAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTCCGGTGTTGTGCCCTTCACAGTAATTTCCTGTATTTAATATAGA  600

seq1  CACAGTGTGTGTACTGATATAACAACTGCTCTTTAGAAACCAGGATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTGTGTGTACTGATATAACAACTGCTCTTTAGAAACCAGGATAACA  650

seq1  TGCTGGTAAATGTGAATTC  669
      |||||||||||||||||||
seq2  TGCTGGTAAATGTGAATTC  669