BAC Information

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BAC

Clone NameB6Ng01-274C02
Chromosome7 (Build37)
Map Location 26,020,368 - 26,180,955
singlet/doubletdoublet
Overlap geneGsk3a, Erf, Cic, Pafah1b3, EG623131, Tmem145, Megf8, Cnfn, Lipe
Upstream geneZfp109, Zfp108, Zfp93, LOC100043690, Zfp61, LOC100043691, Zfp94, 1700008P20Rik, Lypd5, Kcnn4, 1500002O20Rik, Irgc1, Plaur, Cadm4, Zfp428, Irgq, 2310033E01Rik, Xrcc1, Zfp575, Ethe1, LOC100043138, EG232970, Lypd3, LOC100043706, Tex101, Gm1096, BC049730, EG210155, Cd177, Ceacam10, EG545936, LOC100043712, Lypd4, Dmrtc2, Rps19, Cd79a, Arhgef1, EG232974, Rabac1, Atp1a3, Grik5, Zfp574, Pou2f2, Dedd2, Zfp526, 9130221H12Rik
Downstream geneBC024561, LOC434148, Ceacam1, Ceacam2, LOC100043722, EG632778, 2310004L02Rik, B3gnt8, Bckdha, Exosc5, A830041P22Rik, BC028440, Tgfb1, Ccdc97, Hnrpul1, Axl, LOC667950, Cyp2s1, LOC100043732, EG623475, Cyp2b10, LOC232993, EG667957, BC026762, Cyp2b13, EG668047, LOC623532, Cyp2b9, LOC667968, Cyp2a4, Nlrp9c
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274C02.bB6Ng01-274C02.g
ACCGA075515GA075516
length5661,117
definitionB6Ng01-274C02.b B6Ng01-274C02.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,180,384 - 26,180,955)(26,020,368 - 26,021,487)
sequence
tttgttggggtgactctaacgcgactcctcactattcctgctgtgagggc
acttctcgctgcttccaggactgcgggtttttttttggtttttggttttt
ggttttttgtttgtcgttacggtgcactgcgcggttcctttaatctgagc
agatgggcgggccaagaccttcagccccacccattaaaggcggagctccg
cgaggagcctgcccaggattggatggtttgggggcctggcagtggtgtgt
aactaggattgactctaagagaggaacttgatcgctggaattgggccccg
cgccaggactggaaagaattgatggagccggccgtggaatcggcgcccgt
gggggcccaggcctccaagcagggcaaagaaggatcgaagaaccgcagtc
gcaggcggtggcgaaaaggcaagatcaaaggtgagtcggtaacagcttaa
aagaaatcccgcacatcctgcgggggactggggactgggggaactgaccc
acttccacgagggggaagagacccgtggactgatccactgccgtcctgcg
cgtgggggggggggtg
gaattccacagtggaaggtgaaccaacttccaacagctgctcctgacctc
cacagacagaccatggccacacttacagacagacataacgtaggcacaca
ttaataagtaatattgagaacatgaaattccgggctccaactctattgct
aggtacactcagcagtcactcccagcgcccaaacctccagtctacccaag
ctaccttgaaccttttgtcctgaagaaccttcttgatggccaccagttcc
ctcgtctctgccagccgtgcctggtatactactccgaatgagccattacc
aatcactttgatgtcagtgtaagccacttcttgggaacgctctgggcctt
ggcctacagtggctaccactgtggtcaccttcccgctgtcacctaaggaa
caaagggaatacaatccactgatctttcctctctagccaccacagcccag
ggagggaaagctgctcagttcactgtagggacaggacagtgattattctg
tggtagaataactgtctggcacacataaggccaataccttgggttcaatg
cctaagaatggggagaagttatgtcctagcgcttcctccaggaaaccttg
aattctgtcttccatatagcagtacaccaacattcaagcttactttccac
tggtggataaagcacctacaaatttctacttctagcaagtagcagtgaaa
tcacttggtgggggccaccaacacctcaggtgtagaatccagccacacca
ggctacccagcctttcttcccttttgcagggcaggtacaaggtaccacct
tccacacaaaggagcagaaactacgggggtgttccttcctcaaaaaaaac
actgtcaatcctcacagccagagcactgacttctaaatccttcctggcag
aggtcctaagtaacagaaacaggctggtctgaagagccattgccctggcc
ctcaacttggggataagactggagggttgggggtctgttaactcttacca
acctactctacatgttatgggcactggtctggcctctgtgtgctcagagt
agtacctagctgagaatggagctgctcgactccacaactgctggaagcaa
tcccagctggatgcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_26180384_26180955
seq2: B6Ng01-274C02.b_44_615 (reverse)

seq1  CACCCCCCCCCCCACGCGCAGGACGGCAGTGGATCAGTCCACGGGTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCCCCCCCCACGCGCAGGACGGCAGTGGATCAGTCCACGGGTCTCT  50

seq1  TCCCCCTCGTGGAAGTGGGTCAGTTCCCCCAGTCCCCAGTCCCCCGCAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCCTCGTGGAAGTGGGTCAGTTCCCCCAGTCCCCAGTCCCCCGCAGG  100

seq1  ATGTGCGGGATTTCTTTTAAGCTGTTACCGACTCACCTTTGATCTTGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGCGGGATTTCTTTTAAGCTGTTACCGACTCACCTTTGATCTTGCCT  150

seq1  TTTCGCCACCGCCTGCGACTGCGGTTCTTCGATCCTTCTTTGCCCTGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCGCCACCGCCTGCGACTGCGGTTCTTCGATCCTTCTTTGCCCTGCTT  200

seq1  GGAGGCCTGGGCCCCCACGGGCGCCGATTCCACGGCCGGCTCCATCAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGCCTGGGCCCCCACGGGCGCCGATTCCACGGCCGGCTCCATCAATT  250

seq1  CTTTCCAGTCCTGGCGCGGGGCCCAATTCCAGCGATCAAGTTCCTCTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCAGTCCTGGCGCGGGGCCCAATTCCAGCGATCAAGTTCCTCTCTT  300

seq1  AGAGTCAATCCTAGTTACACACCACTGCCAGGCCCCCAAACCATCCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTCAATCCTAGTTACACACCACTGCCAGGCCCCCAAACCATCCAATC  350

seq1  CTGGGCAGGCTCCTCGCGGAGCTCCGCCTTTAATGGGTGGGGCTGAAGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAGGCTCCTCGCGGAGCTCCGCCTTTAATGGGTGGGGCTGAAGGT  400

seq1  CTTGGCCCGCCCATCTGCTCAGATTAAAGGAACCGCGCAGTGCACCGTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGCCCGCCCATCTGCTCAGATTAAAGGAACCGCGCAGTGCACCGTAA  450

seq1  CGACAAACAAAAAACCAAAAACCAAAAACCAAAAAAAAACCCGCAGTCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACAAACAAAAAACCAAAAACCAAAAACCAAAAAAAAACCCGCAGTCCT  500

seq1  GGAAGCAGCGAGAAGTGCCCTCACAGCAGGAATAGTGAGGAGTCGCGTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCAGCGAGAAGTGCCCTCACAGCAGGAATAGTGAGGAGTCGCGTTA  550

seq1  GAGTCACCCCAACAAAGAATTC  572
      ||||||||||||||||||||||
seq2  GAGTCACCCCAACAAAGAATTC  572

seq1: chr7_26020368_26021487
seq2: B6Ng01-274C02.g_68_1184

seq1  GAATTCCACAGTGGAAGGTGAACCAACTTCCAACAGCTGCTCCTGACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGTGGAAGGTGAACCAACTTCCAACAGCTGCTCCTGACCTC  50

seq1  CACAGACAGACCATGGCCACACTTACAGACAGACATAACGTAGGCACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGACAGACCATGGCCACACTTACAGACAGACATAACGTAGGCACACA  100

seq1  TTAATAAGTAATATTGAGAACATGAAATTCCGGGCTCCAACTCTATTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAAGTAATATTGAGAACATGAAATTCCGGGCTCCAACTCTATTGCT  150

seq1  AGGTACACTCAGCAGTCACTCCCAGCGCCCAAACCTCCAGTCTACCCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTACACTCAGCAGTCACTCCCAGCGCCCAAACCTCCAGTCTACCCAAG  200

seq1  CTACCTTGAACCTTTTGTCCTGAAGAACCTTCTTGATGGCCACCAGTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCTTGAACCTTTTGTCCTGAAGAACCTTCTTGATGGCCACCAGTTCC  250

seq1  CTCGTCTCTGCCAGCCGTGCCTGGTATACTACTCCGAATGAGCCATTACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTCTCTGCCAGCCGTGCCTGGTATACTACTCCGAATGAGCCATTACC  300

seq1  AATCACTTTGATGTCAGTGTAAGCCACTTCTTGGGAACGCTCTGGGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACTTTGATGTCAGTGTAAGCCACTTCTTGGGAACGCTCTGGGCCTT  350

seq1  GGCCTACAGTGGCTACCACTGTGGTCACCTTCCCGCTGTCACCTAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTACAGTGGCTACCACTGTGGTCACCTTCCCGCTGTCACCTAAGGAA  400

seq1  CAAAGGGAATACAATCCACTGATCTTTCCTCTCTAGCCACCACAGCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGGGAATACAATCCACTGATCTTTCCTCTCTAGCCACCACAGCCCAG  450

seq1  GGAGGGAAAGCTGCTCAGTTCACTGTAGGGACAGGACAGTGATTATTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGGAAAGCTGCTCAGTTCACTGTAGGGACAGGACAGTGATTATTCTG  500

seq1  TGGTAGAATAACTGTCTGGCACACATAAGGCCAATACCTTGGGTTCAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAGAATAACTGTCTGGCACACATAAGGCCAATACCTTGGGTTCAATG  550

seq1  CCTAAGAATGGGGAGAAGTTATGTCCTAGCGCTTCCTCCAGGAAACCTTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAGAATGGGGAGAAGTTATGTCCTAGCGCTTCCTCCAGGAAACCTTG  600

seq1  AATTCTGTCTTCCATATAGCAGTACACCAACATTCAAGCTTACTTTCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTCTTCCATATAGCAGTACACCAACATTCAAGCTTACTTTCCAC  650

seq1  TGGTGGATAAAGCACCTACAAATTTCTACTTCTAGCAAGTAGCAGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGATAAAGCACCTACAAATTTCTACTTCTAGCAAGTAGCAGTGAAA  700

seq1  TCACTTGGTGGGGGCCACCAACACCTCAGGTGTAGAATCCAGCCACACCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTGGTGGGGGCCACCAACACCTCAGGTGTAGAATCCAGCCACACCA  750

seq1  GGCTACCCAGCCTTTCTTCCCTTTTGCAGGGCAGGTACAAGGTACCACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTACCCAGCCTTTCTTCCCTTTTGCAGGGCAGGTACAAGGTACCACCT  800

seq1  TCCACACAAAGGAGCAGAAACTACGGGGGTGTTCCTTCCTCAAAAAAAAA  850
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TCCACACAAAGGAGCAGAAACTACGGGGGTGTTCCTTCCTC-AAAAAAAA  849

seq1  CACTGTCAATCCTCACAGCCAGAGCACTGACTTCTAAATCCTTCCTGGCA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTCAATCCTCACAGCCAGAGCACTGACTTCTAAATCCTTCCTGGCA  899

seq1  GAGGTCCTAAGTAACAGAAACAAGCTGGTCTGAAGAGCCATTGCCCTGGC  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GAGGTCCTAAGTAACAGAAACAGGCTGGTCTGAAGAGCCATTGCCCTGGC  949

seq1  CCTC-ACTTGGGGATAAGGACTGGAGGGTTGGGGGTCTGTT-ACTCTTAC  998
      |||| |||||||||||| ||||||||||||||||||||||| ||||||||
seq2  CCTCAACTTGGGGATAA-GACTGGAGGGTTGGGGGTCTGTTAACTCTTAC  998

seq1  CAA-CTACTCTACATTGTTATGGGCACTGGTCTGGCCTCTGTGTGCTCCA  1047
      ||| |||||||||| |||||||||||||||||||||||||||||||| ||
seq2  CAACCTACTCTACA-TGTTATGGGCACTGGTCTGGCCTCTGTGTGCT-CA  1046

seq1  GAGTAGTACCTAGCCTGAGAATGGAGCTGCTCAACTCCACAACTGCTGAA  1097
      ||||||||||||| |||||||||||||||||| ||||||||||||||| |
seq2  GAGTAGTACCTAG-CTGAGAATGGAGCTGCTCGACTCCACAACTGCTGGA  1095

seq1  GGCATATCCCAGCCTGATGCCTT  1120
       ||| ||||||||  ||||||||
seq2  AGCA-ATCCCAGCTGGATGCCTT  1117