BAC Information

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BAC

Clone NameB6Ng01-274J05
Chromosome7 (Build37)
Map Location 81,668,079 - 81,854,180
singlet/doubletdoublet
Overlap geneSlco3a1, EG665641
Upstream geneChd2, 1810026B05Rik, EG665610, LOC244061, A830073O21Rik, St8sia2, LOC100042127, LOC100042140, LOC546979, EG665308
Downstream gene0610006L08Rik, Sv2b, 1500012K07Rik, LOC100042171, Akap13
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274J05.bB6Ng01-274J05.g
ACCGA075840GA075841
length1,208390
definitionB6Ng01-274J05.b B6Ng01-274J05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(81,852,996 - 81,854,180)(81,668,079 - 81,668,474)
sequence
gaattccagcaactcttcctaaaccttcatcctattctaatcccacagct
gttgccatggaaatgatcagataagattcagtcctggaggcagatgggcc
tgcagtgggagctaagtcctggcctatatattggttccgtttggtttttc
tcccaatctttgctttgcagcaaccggtctccacacacgagaggttaatt
taacaggaagtcctgacaaccaggctgtgtgcttgagcatctggtgcaaa
tgaggaaaagtcagttccaaaacactgctgaggaacgaaaactcggtgat
gcctccagtctccttgtttctggacacttagagtaaaaacaacagcagag
gcctcaccgaaatcctacacacacagatggtccccagggccaagaagaat
gggttgcaccaggccaccccaccctgtactttgccagcagaggtggcagc
attcctgggcctttgctaggtgcccccaggactcttgcctgctgcatcag
caatgtcctgacagggtttttccatgcttcagtcaacatcccttttccaa
gggcattcttgtacatagaagcataggaaaatctaaagtttaaaacattg
cttctaaaccagattcagtcgaagctggtctgggattaggctggtgagaa
gccagacttcatctctctcctgggagcatgtgtgacatcattgatcatga
agtctttctccagaaacttcattagcctgaaagtcagttcgcctttcagc
gaggcagtgaggcagatttcctgcaaggggtggccctggtatgtcacaag
aacaagagaaacttaactgggaaacacagagctgggagaagtggaaggag
attggaggatctctagatatgagttagtatgagcagttttcgccagaaga
ggctgaggttggggtttccatgccttttcagtttctctatgggtaacacc
tttaatcctgcctttaatttaatgatgggatgaaggagtctcagccatct
tttgttgttgttgttgctcttttccttggaacgggaatcaggtttaggtt
ctttataagcctttgcccctttttggaaggcgttcaatcatatatcctac
catgcttgtcatcaatcgtttaagatggaaataagcattcaataaatatc
ctgtttaattcttagtcacttaatgaatcagggcgttccaaggccccacc
ctatctga

aaaatttgtcatttatgggaagtggcaaatcacctctgcagggtacccct
ggctcctgctgggtttctgaaaggcaaaggctgcctagccatactgagcg
gccacataagatgaagcattgtgtggtcccagctgctgtggggcctgtgt
gcatacaggcagtgccatgtcactcagtgggggagggaatatgagtgact
gcagggtcaaagccattaaagccaatggctatcccaaaatcagagcctgg
tcacggttgtggtagacagtgatacgcagagtggaaaagccaggcaagaa
acaatactgtatcctgagttctggacaaatgacagcagcaagaaggaagg
aaggaaggaaggaaggaaggaaggaaggaagggagggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_81852996_81854180
seq2: B6Ng01-274J05.b_41_1248 (reverse)

seq1  TCAGATAGGGTTGGGCCTTGGGACACCCCTCCTCCATCAGTG-CT-AGAA  48
      ||||||||||| ||||||||| || |||    ||  | |||| || ||||
seq2  TCAGATAGGGTGGGGCCTTGGAACGCCCTGATTCATTAAGTGACTAAGAA  50

seq1  TTAAACA-GATATTTATTGAATGCCTTATTT-CATC-TAAACGA-TGATG  94
      ||||||| ||||||||||||||| ||||||| |||| ||||||| |||||
seq2  TTAAACAGGATATTTATTGAATG-CTTATTTCCATCTTAAACGATTGATG  99

seq1  -CCAGCAT-GTAGGATATATGAATG-ACG-CTTCCAAAA--GGGCATA-G  137
       | ||||| ||||||||||||| || ||| |||||||||  ||||| | |
seq2  ACAAGCATGGTAGGATATATGATTGAACGCCTTCCAAAAAGGGGCAAAGG  149

seq1  CTAAT-AAGAA-CTAAA-CTGA-TCCCGT--CCAGGGAAAGAGCAACAAC  181
      || || ||||| ||||| |||| ||||||  | ||| |||||||||||||
seq2  CTTATAAAGAACCTAAACCTGATTCCCGTTCCAAGGAAAAGAGCAACAAC  199

seq1  AACAACAAAAGATGGCTGAGACTCCTTCAT-CCATCATTAAATTAAAGGC  230
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AACAACAAAAGATGGCTGAGACTCCTTCATCCCATCATTAAATTAAAGGC  249

seq1  AGGAT--AAGGTGTTACCCATAGAGAAACTG-AAAGGCATGGAAACCCCA  277
      |||||  |||||||||||||||||||||||| ||||||||||||||||||
seq2  AGGATTAAAGGTGTTACCCATAGAGAAACTGAAAAGGCATGGAAACCCCA  299

seq1  ACCTCAGCCTCTTCTGGCG-AAACTGCTCATACTAACTCATATCTAGAGA  326
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACCTCAGCCTCTTCTGGCGAAAACTGCTCATACTAACTCATATCTAGAGA  349

seq1  TCCTCCAATCTCCTTCCACTTCTCCCAGCTCTGTGTTTCCCAGTTAAGTT  376
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCAATCTCCTTCCACTTCTCCCAGCTCTGTGTTTCCCAGTTAAGTT  399

seq1  TCTCTTGTTCTTGTGACATACCAGGGCCACCCCTTGCAGGAAATCTGCCT  426
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTGTTCTTGTGACATACCAGGGCCACCCCTTGCAGGAAATCTGCCT  449

seq1  CACTGCCTCGCTGAAAGGCGAACTGACTTTCAGGCTAATGAAGTTTCTGG  476
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCCTCGCTGAAAGGCGAACTGACTTTCAGGCTAATGAAGTTTCTGG  499

seq1  AGAAAGACTTCATGATCAATGATGTCACACATGCTCCCAGGAGAGAGATG  526
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGACTTCATGATCAATGATGTCACACATGCTCCCAGGAGAGAGATG  549

seq1  AAGTCTGGCTTCTCACCAGCCTAATCCCAGACCAGCTTCGACTGAATCTG  576
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCTGGCTTCTCACCAGCCTAATCCCAGACCAGCTTCGACTGAATCTG  599

seq1  GTTTAGAAGCAATGTTTTAAACTTTAGATTTTCCTATGCTTCTATGTACA  626
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAGAAGCAATGTTTTAAACTTTAGATTTTCCTATGCTTCTATGTACA  649

seq1  AGAATGCCCTTGGAAAAGGGATGTTGACTGAAGCATGGAAAAACCCTGTC  676
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGCCCTTGGAAAAGGGATGTTGACTGAAGCATGGAAAAACCCTGTC  699

seq1  AGGACATTGCTGATGCAGCAGGCAAGAGTCCTGGGGGCACCTAGCAAAGG  726
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACATTGCTGATGCAGCAGGCAAGAGTCCTGGGGGCACCTAGCAAAGG  749

seq1  CCCAGGAATGCTGCCACCTCTGCTGGCAAAGTACAGGGTGGGGTGGCCTG  776
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAATGCTGCCACCTCTGCTGGCAAAGTACAGGGTGGGGTGGCCTG  799

seq1  GTGCAACCCATTCTTCTTGGCCCTGGGGACCATCTGTGTGTGTAGGATTT  826
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAACCCATTCTTCTTGGCCCTGGGGACCATCTGTGTGTGTAGGATTT  849

seq1  CGGTGAGGCCTCTGCTGTTGTTTTTACTCTAAGTGTCCAGAAACAAGGAG  876
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGAGGCCTCTGCTGTTGTTTTTACTCTAAGTGTCCAGAAACAAGGAG  899

seq1  ACTGGAGGCATCACCGAGTTTTCGTTCCTCAGCAGTGTTTTGGAACTGAC  926
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAGGCATCACCGAGTTTTCGTTCCTCAGCAGTGTTTTGGAACTGAC  949

seq1  TTTTCCTCATTTGCACCAGATGCTCAAGCACACAGCCTGGTTGTCAGGAC  976
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTCATTTGCACCAGATGCTCAAGCACACAGCCTGGTTGTCAGGAC  999

seq1  TTCCTGTTAAATTAACCTCTCGTGTGTGGAGACCGGTTGCTGCAAAGCAA  1026
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTTAAATTAACCTCTCGTGTGTGGAGACCGGTTGCTGCAAAGCAA  1049

seq1  AGATTGGGAGAAAAACCAAACGGAACCAATATATAGGCCAGGACTTAGCT  1076
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGGGAGAAAAACCAAACGGAACCAATATATAGGCCAGGACTTAGCT  1099

seq1  CCCACTGCAGGCCCATCTGCCTCCAGGACTGAATCTTATCTGATCATTTC  1126
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGCAGGCCCATCTGCCTCCAGGACTGAATCTTATCTGATCATTTC  1149

seq1  CATGGCAACAGCTGTGGGATTAGAATAGGATGAAGGTTTAGGAAGAGTTG  1176
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGCAACAGCTGTGGGATTAGAATAGGATGAAGGTTTAGGAAGAGTTG  1199

seq1  CTGGAATTC  1185
      |||||||||
seq2  CTGGAATTC  1208


seq1: chr7_81668079_81668474
seq2: B6Ng01-274J05.g_69_464

seq1  GAATTCAAAATTTGTCATTTATGGGAAGTGGCAAATCACCTCTGCAGGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATTTGTCATTTATGGGAAGTGGCAAATCACCTCTGCAGGGT  50

seq1  ACCCCTGGCTCCTGCTGGGTTTCTGAAAGGCAAAGGCTGCCTAGCCATAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTGGCTCCTGCTGGGTTTCTGAAAGGCAAAGGCTGCCTAGCCATAC  100

seq1  TGAGCGGCCACATAAGATGAAGCATTGTGTGGTCCCAGCTGCTGTGGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCGGCCACATAAGATGAAGCATTGTGTGGTCCCAGCTGCTGTGGGGC  150

seq1  CTGTGTGCATACAGGCAGTGCCATGTCACTCAGTGGGGGAGGGAATATGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTGCATACAGGCAGTGCCATGTCACTCAGTGGGGGAGGGAATATGA  200

seq1  GTGACTGCAGGGTCAAAGCCATTAAAGCCAATGGCTATCCCAAAATCAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACTGCAGGGTCAAAGCCATTAAAGCCAATGGCTATCCCAAAATCAGA  250

seq1  GCCTGGTCACGGTTGTGGTAGACAGTGATACGCAGAGTGGAAAAGCCAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCACGGTTGTGGTAGACAGTGATACGCAGAGTGGAAAAGCCAGG  300

seq1  CAAGAAACAATACTGTATCCTGAGTTCTGGACAAATGACAGCAGCAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAACAATACTGTATCCTGAGTTCTGGACAAATGACAGCAGCAAGAA  350

seq1  GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGAAGGGAGGGAGG  396


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