BAC Information

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BAC

Clone NameB6Ng01-275L22
Chromosome7 (Build37)
Map Location 111,225,491 - 111,410,863
singlet/doubletdoublet
Overlap geneOlfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497
Upstream geneOlfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609, Olfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620, LOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644
Downstream geneEG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655, Olfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275L22.bB6Ng01-275L22.g
ACCGA076699GA076700
length1,1011,166
definitionB6Ng01-275L22.b B6Ng01-275L22.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,409,745 - 111,410,863)(111,225,491 - 111,226,474)
sequence
gaattcttgagcacaacactattattacttgatttctccaataacttggc
tttctatttattacccccaaacagaatttggctaataacaatataaatga
acagattcaatttttagctgcaaatgaattttaatagtttagaacaacag
tgaagaccagtccccctttttttttcaaatcagacatgctccacatgaga
ttatacatatggaatcaaacttgcaaggaagacgactagcatttgaagac
aacaggtatttataatactccaaacattccacaaaatatttcattgagta
caaaggactataggcccatgtattatgtacaagacagttaaatgggtatt
ttatatttacacatacctagtttcatacaaccatcttaagtcaaatgcac
ttcaattttcagtttaagaaccttagaatttattagtttgtaagaggcag
catttgaatttatatagtagtcataacctcaactctagattatgtgttgc
tgttcatactttctattccttgacttcttgttgaatgtaaggtatcctga
gcgacatagtgttaaaaatccattagttgtggtctggagtcagttcttat
ggattgtcttaaacaacaaggatgagttactggctaatagactttgtcaa
ctttcttcaagacaaagggaaatatggaaggcagagggcatggatattac
cctgacctagctttaggcttttttgagaaaatgagctagagtaaaaggta
agcatctcttctacatgatgccagatacaccacatccaagcatgacagaa
gggagaccatgggaagagatgcctgaacagcacaggtccatacacaaagg
taagcatcaaggccagaagtaagagcagaacggatgagaatgagaaaact
caggagttcagaggacacagggtcatgggggctggacagtcccaaggatt
gaagtatggatagcagttgggaaaagcagcattgggagaactgtaatgat
gatcatgtggtgacatgagagatactgtgcctctcacagtcaagaaaaat
cctcatccgatggagaggggttgctacaaagggttcagacagtagtcaca
g
gaattcatttgctgttcaaaagaaaatgtacatgctctccttccctaagg
ggctaaggttataaaatgtgatttgtgggataatcaaaagaaaacctagg
gtaatgattaaattgatatgtaaataaaagattagtctttggtctacaag
agctgagctatctacacaactgtctaaagagccagcttgagcagaacata
aagctgtcagtttccaccatgtcattgactcaagtcatttcttccactgc
tctcaaacatcccttccccaggatgccctctcaagctgaggctggtactt
gacaatagatagtacaattaccaaatcaaagtaattagcatgtgtccact
tttaacaattactttcttgtctgagaacaatgaaactcttaacaattttg
aaatgccaataagttgttactttactgtattacactagaatattttcctt
ttatctagctgtgatattgtatccattgaccaaacattctctatccttcc
tctgttgtgttcaacctaaaattctacacataactgaaatagagaggtag
ttgtctttctttagttggcttattttgagtatcataatgtctttcaggct
atttttaattaaataccatatttattaatttattaccatgttatatttat
taattagatattgatattaattaataagtaattaatatgaaaaggacaga
tacaatcttcagttttcctttccttttttcaactgtatttaaagagcttt
gctgtaccatgcactatgctaggtacacagaaagctttaaatttcacttg
gatatttagctataaaatgacaccatgaaacactgttgatcctctttgct
ttcttgagaaagaataaagtcatatatttattgaaaggaaaattatggga
atctttcctcacctgtgaaatagaacaagagcaagtaagcaagacaaagt
gtttgggttacttcttgtttctttgtttttccattactctaaagtcttaa
ttcaacctcaccttgatttttttttctatgatcaatgagattttagtaga
ataatgtgagaaggattgaatagccttgtgggaatctgttgaagactttc
gcctgaatggagtgggagactgcacttacctattctctgaacttgcactt
catacttgagaaggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_111409745_111410863
seq2: B6Ng01-275L22.b_45_1145 (reverse)

seq1  CTGTGACCCTACTGTTCTGAACCCCTTTGTGGCCACCCCTCTCCATCGGG  50
      ||||||  |||||| |||||| |||||||| || ||||||||||||||| 
seq2  CTGTGA--CTACTG-TCTGAA-CCCTTTGTAGCAACCCCTCTCCATCGGA  46

seq1  TTGGGGTTTTTCTTGACTGTGAAGAGGGCACAGTATCCTTCCTCAATGTC  100
      |  || ||||||||||||||| ||| |||||||||||  ||    |||||
seq2  TGAGGATTTTTCTTGACTGTG-AGA-GGCACAGTATCTCTC----ATGTC  90

seq1  ACCAACCATGGATCACTCATTTACAAGTTCTCCCAATGCTGCTTTTCCCA  150
      ||||  ||| ||||| ||| |||| |||||||||||||||||||||||||
seq2  ACCA--CAT-GATCA-TCA-TTAC-AGTTCTCCCAATGCTGCTTTTCCCA  134

seq1  ACCTGCCTATCCATACTTCAATCCTTGGGACTGTCCAGCCCCCATGACCC  200
      | ||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  A-CTG-CTATCCATACTTCAATCCTTGGGACTGTCCAGCCCCCATGACCC  182

seq1  TGTGTCCTCTGAACTCCTGAGTTTTCTCATTCTCATCCGTTTCTGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGTGTCCTCTGAACTCCTGAGTTTTCTCATTCTCATCCG-TTCTGCTCTT  231

seq1  ACTTCTGGCCTTGATGCTTACC-TTGTGTATGGACCTGTGCTGTTCAGGC  299
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACTTCTGGCCTTGATGCTTACCTTTGTGTATGGACCTGTGCTGTTCAGGC  281

seq1  ATCTCTTCCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCCCATGGTCTCCCTTCTGTCATGCTTGGATGTGGTGTATCTGG  331

seq1  CATCATGTAGAAGAGATGCTTACCTTTTACTCTAGCTCATTTTCTCAAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGTAGAAGAGATGCTTACCTTTTACTCTAGCTCATTTTCTCAAAA  381

seq1  AAGCCTAAAGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAAAGCTAGGTCAGGGTAATATCCATGCCCTCTGCCTTCCATATT  431

seq1  TCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAGTAACTCATC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTTGTCTTGAAGAAAGTTGACAAAGTCTATTAGCCAGTAACTCATC  481

seq1  CTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGTTTAAGACAATCCATAAGAACTGACTCCAGACCACAACTAATG  531

seq1  GATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAACAAGAAGTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTAACACTATGTCGCTCAGGATACCTTACATTCAACAAGAAGTCA  581

seq1  AGGAATAGAAAGTATGAACAGCAACACATAATCTAGAGTTGAGGTTATGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGAAAGTATGAACAGCAACACATAATCTAGAGTTGAGGTTATGA  631

seq1  CTACTATATAAATTCAAATGCTGCCTCTTACAAACTAATAAATTCTAAGG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATATAAATTCAAATGCTGCCTCTTACAAACTAATAAATTCTAAGG  681

seq1  TTCTTAAACTGAAAATTGAAGTGCATTTGACTTAAGATGGTTGTATGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAACTGAAAATTGAAGTGCATTTGACTTAAGATGGTTGTATGAAA  731

seq1  CTAGGTATGTGTAAATATAAAATACCCATTTAACTGTCTTGTACATAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGTATGTGTAAATATAAAATACCCATTTAACTGTCTTGTACATAATA  781

seq1  CATGGGCCTATAGTCCTTTGTACTCAATGAAATATTTTGTGGAATGTTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGGCCTATAGTCCTTTGTACTCAATGAAATATTTTGTGGAATGTTTG  831

seq1  GAGTATTATAAATACCTGTTGTCTTCAAATGCTAGTCGTCTTCCTTGCAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTATAAATACCTGTTGTCTTCAAATGCTAGTCGTCTTCCTTGCAA  881

seq1  GTTTGATTCCATATGTATAATCTCATGTGGAGCATGTCTGATTTGAAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTCCATATGTATAATCTCATGTGGAGCATGTCTGATTTGAAAAA  931

seq1  AAAAGGGGGACTGGTCTTCACTGTTGTTCTAAACTATTAAAATTCATTTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGGGACTGGTCTTCACTGTTGTTCTAAACTATTAAAATTCATTTG  981

seq1  CAGCTAAAAATTGAATCTGTTCATTTATATTGTTATTAGCCAAATTCTGT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAAAATTGAATCTGTTCATTTATATTGTTATTAGCCAAATTCTGT  1031

seq1  TTGGGGGTAATAAATAGAAAGCCAAGTTATTGGAGAAATCAAGTAATAAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGGGTAATAAATAGAAAGCCAAGTTATTGGAGAAATCAAGTAATAAT  1081

seq1  AGTGTTGTGCTCAAGAATTC  1119
      ||||||||||||||||||||
seq2  AGTGTTGTGCTCAAGAATTC  1101

seq1: chr7_111225491_111226474
seq2: B6Ng01-275L22.g_257_1232

seq1  GCAGAACATAAAGCTGTCAGTTTCCACCATGTCATTGACTCAAGTCATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAACATAAAGCTGTCAGTTTCCACCATGTCATTGACTCAAGTCATTT  50

seq1  CTTCCACTGCTCTCAAACATCCCTTCCCCAGGATGCCCTCTCAAGCTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACTGCTCTCAAACATCCCTTCCCCAGGATGCCCTCTCAAGCTGAG  100

seq1  GCTGGTACTTGACAATAGATAGTACAATTACCAAATCAAAGTAATTAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTACTTGACAATAGATAGTACAATTACCAAATCAAAGTAATTAGCA  150

seq1  TGTGTCCACTTTTAACAATTACTTTCTTGTCTGAGAACAATGAAACTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCACTTTTAACAATTACTTTCTTGTCTGAGAACAATGAAACTCTT  200

seq1  AACAATTTTGAAATGCCAATAAGTTGTTACTTTACTGTATTACACTAGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATTTTGAAATGCCAATAAGTTGTTACTTTACTGTATTACACTAGAA  250

seq1  TATTTTCCTTTTATCTAGCTGTGATATTGTATCCATTGACCAAACATTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTCCTTTTATCTAGCTGTGATATTGTATCCATTGACCAAACATTCT  300

seq1  CTATCCTTCCTCTGTTGTGTTCAACCTAAAATTCTACACATAACTGAAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTTCCTCTGTTGTGTTCAACCTAAAATTCTACACATAACTGAAAT  350

seq1  AGAGAGGTAGTTGTCTTTCTTTAGTTGGCTTATTTTGAGTATCATAATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGTAGTTGTCTTTCTTTAGTTGGCTTATTTTGAGTATCATAATGT  400

seq1  CTTTCAGGCTATTTTTAATTAAATACCATATTTATTAATTTATTACCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCAGGCTATTTTTAATTAAATACCATATTTATTAATTTATTACCATG  450

seq1  TTATATTTATTAATTAGATATTGATATTAATTAATAAGTAATTAATATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATATTTATTAATTAGATATTGATATTAATTAATAAGTAATTAATATGA  500

seq1  AAAGGACAGATACAATCTTCAGTTTTCCTTTCCTTTTTTCAACTGTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACAGATACAATCTTCAGTTTTCCTTTCCTTTTTTCAACTGTATTT  550

seq1  AAAGAGCTTTGCTGTACCATGCACTATGCTAGGTACACAGAAAGCTTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCTTTGCTGTACCATGCACTATGCTAGGTACACAGAAAGCTTTAA  600

seq1  ATTTCACTTGGATATTTAGCTATAAAATGACACCATGAAACACTGTTGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCACTTGGATATTTAGCTATAAAATGACACCATGAAACACTGTTGAT  650

seq1  CCTCTTTGCTTTCTTGAGAAAGAATAAAGTCATATATTTATTGAAAGGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTTGCTTTCTTGAGAAAGAATAAAGTCATATATTTATTGAAAGGAA  700

seq1  AATTAT-GGAATC-TTCCTCACCTGTGAAATAGAACAAGAGCAAGTAGGC  748
      |||||| |||||| ||||||||||||||||||||||||||||||||| ||
seq2  AATTATGGGAATCTTTCCTCACCTGTGAAATAGAACAAGAGCAAGTAAGC  750

seq1  AAGACAAAGTGTTTGGGTTACTTCTTTGTTTCTTTGTTTTTTCCCATTAC  798
      |||||||||||||||||||||||| ||||||||||||||||  |||||||
seq2  AAGACAAAGTGTTTGGGTTACTTC-TTGTTTCTTTGTTTTT--CCATTAC  797

seq1  TCTAAAGTCTTAATTCAAACCTCACCTTGA-TTTTTTTTCTATGATCAAA  847
      |||||||||||||||| ||||||||||||| |||||||||||||||| ||
seq2  TCTAAAGTCTTAATTC-AACCTCACCTTGATTTTTTTTTCTATGATC-AA  845

seq1  TGAAGAATTTTTAGTAGAATAATGTGAGAA-GATTGAATTAAGGCCTTGT  896
      || |||  |||||||||||||||||||||| ||||||||    |||||||
seq2  TG-AGA--TTTTAGTAGAATAATGTGAGAAGGATTGAAT---AGCCTTGT  889

seq1  GGGAATCTGTTTGGAGGGACTTTTGGCTGAAATGGAGTGGGAGAGCTGCA  946
      |||||||||||  ||  |||||| | ||| |||||||||||||| |||||
seq2  GGGAATCTGTT--GA-AGACTTTCGCCTG-AATGGAGTGGGAGA-CTGCA  934

seq1  -TCACCTATCCTCT-AAC-TGCAC-TCATACTTTAGAAGGTG  984
       | |||||| |||| ||| ||||| |||||||| ||||||||
seq2  CTTACCTATTCTCTGAACTTGCACTTCATACTTGAGAAGGTG  976