BAC Information

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BAC

Clone NameB6Ng01-275P17
Chromosome7 (Build37)
Map Location 107,018,709 - 107,231,905
singlet/doubletdoublet
Overlap geneXrra1, EG330602, Chrdl2, Pold3
Upstream geneLOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1, Gdpd5, 2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2
Downstream gene2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772, Ucp3, Ucp2, Dnajb13, LOC667112, Chchd8, Mrpl48, LOC100041155, Rab6, LOC100041167, Plekhb1, B930006L02Rik, LOC100041204, Tnfrsf19l, Arhgef17, P2ry6, P2ry2, LOC100049539, EG435996
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-275P17.bB6Ng01-275P17.g
ACCGA076873GA076874
length1,0491,137
definitionB6Ng01-275P17.b B6Ng01-275P17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(107,230,862 - 107,231,905)(107,018,709 - 107,019,821)
sequence
gaattcattcaagaatgacctgctgggccacacttgccctgcgcatgtgc
ctctcctggtctctgtgttctgtgagcgggaggcagtgtttttatttgat
gagttctactggatgtgttcaccgcgtctccactttcctctccacactac
catacttctgtcccccgaccccacaatctgttttctgtaaatcttttaag
tcttagtcagatgagaagctaaaactaaaatcttctgtaattcccgatct
ccgttgatgtagtgagtgactcagctccaggctaggccagtgtgcatcgt
ccagtcctttcatctcatccgctccctctcacttccctcagactgagatg
tgctgatgaatccagcctcaccagaaatgacttaaagtcacatggtggcc
aatgacagagctggcatgttgctagcacagggtatgcatatactcatgtg
tggtttctttcttccagatttcctatacttattacccagagagtggaacc
tgtacagcgagatgaaagattaaaataagaatgctttctatgcaccagat
aacttacctcaaggaaatacagagtccagaaatgtcagtttcctgtcctg
ggaaggaagggagaacttagcacacatttctacacagatgttgctcctct
gttttgtcaagttcttcatttgtccagcagcacaggctccccaggagggg
acagggggctgacttttataactttcagtcaccttccattctggctgggc
aggaggtgagccctgtccgtgttgtgtggcagtggctttgcacactgagc
tgtagtgagggaacccagactccactgctggtgtgaacccaggggagatg
agggatgtctgctccaaccctccgctgagggcttgcttgtgtcatgtaat
cagttgcctactgttggaggttgggggttggggctgacttgggaattaac
acatcatgcttttatcaatcaagtcctgggctacctggagatcagcagct
tgggagatgaagtcctggtcttctgctcagactggagggcagatgcttg
gaattccttcagcctagtagagctatctcatgctggtaggttctctgggc
ttccacactacctcagatattattgaactgttaggggtcagggcttctgt
catgttcattgctatgaccccagctctcagcacaaagtagatgtcctcaa
acatctaggcaggcgatgatgtggcttcactacatcattcgtttagcagc
ggtcacagtggtgagctctgtgcaggctgtgtggactcaaagatgagtta
gtcagacaaggcccctgctgttaaagagtgtctattctggagggagggga
atgtggacaacaaatgagtaaataaataatataaagattatagttaattc
caaggttagattaattgctaatgtggaagataacagattatagaacatca
tcatgatatttaaatgggcttactatgaacgtcatattcttattttgttt
ttttgttttgtttttttcaatttttaagatagggttccatgtaacccagg
ctggccttaaacttgctgtgtagccaagggtgaccttgggtcctcctagt
tccactttctgaatactgagattacaggtgtgctccactataacaagttt
tatgtagtgagggggcgggggaaactgaggtttccgtgtatgctaggcaa
acgcttggccaacagagttacatccctaggagtcatattagtctttttgc
tgatgtataaaattgaggtcaccgagcctagcattgagagattaatcctt
cgtgctgacagggatcagggaaagacatcacataacaggaagaatctgat
cctgtctcttaaccgaacagtagccttgggagatgaggaaggaatttgtg
cagcccatccccctcttttatcattaagccagttcattcatagtattacg
ccttcactgaagtttagaggcttcttcgaatgagaacatgtgcacagaca
cttcagcagtagtgagtgctttgttagttgtagttacttcagagattaaa
ttagaagataaattacgcataagagaacaatatttctgtaattcatatct
ttgtttcaatgggcgttttgacctttactcacttgttcaaatctttccca
caggcccgggaacacttggaatagtggttccggaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_107230862_107231905
seq2: B6Ng01-275P17.b_45_1093 (reverse)

seq1  CAAGCATCTGCCCTCCAGTTCTCGACAGGAGACCAGGAC-TCATCTCCCA  49
      |||||||||||||||||| |||   ||| |||||||||| ||||||||||
seq2  CAAGCATCTGCCCTCCAG-TCTGAGCAGAAGACCAGGACTTCATCTCCCA  49

seq1  AGCTGCTGGTCTCCAGGTAGCCCAGG-CTTGGTTGCT-AAAGCA-GATGT  96
      |||||||| ||||||||||||||||| |||| ||| | |||||| |||||
seq2  AGCTGCTGATCTCCAGGTAGCCCAGGACTTGATTGATAAAAGCATGATGT  99

seq1  G-TAAATCCCAAGTCAGCCCCAA-CCCCAACCTCCAACAGTAGGCAACTG  144
      | ||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTAATTCCCAAGTCAGCCCCAACCCCCAACCTCCAACAGTAGGCAACTG  149

seq1  ATTACATGACACAAGCCAGCCCTCAGCGGAGGGTTGGAGCAGACATCCCT  194
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATTACATGACACAAGCAAGCCCTCAGCGGAGGGTTGGAGCAGACATCCCT  199

seq1  CATCTCCCCTGGGTTCACACCAGCAGTGGAGTCTGGGTTCCCTCACTACA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCCCTGGGTTCACACCAGCAGTGGAGTCTGGGTTCCCTCACTACA  249

seq1  GCTCAGTGTGCAAAGCCACTGCCACACAACACGGACAGGGCTCACCTCCT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTGTGCAAAGCCACTGCCACACAACACGGACAGGGCTCACCTCCT  299

seq1  GCCCAGCCAGAATGGAAGGTGACTGAAAGTTATAAAAGTCAGCCCCCTGT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCCAGAATGGAAGGTGACTGAAAGTTATAAAAGTCAGCCCCCTGT  349

seq1  CCCCTCCTGGGGAGCCTGTGCTGCTGGACAAATGAAGAACTTGACAAAAC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCTGGGGAGCCTGTGCTGCTGGACAAATGAAGAACTTGACAAAAC  399

seq1  AGAGGAGCAACATCTGTGTAGAAATGTGTGCTAAGTTCTCCCTTCCTTCC  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGAGCAACATCTGTGTAGAAATGTGTGCTAAGTTCTCCCTTCCTTCC  449

seq1  CAGGACAGGAAACTGACATTTCTGGACTCTGTATTTCCTTGAGGTAAGTT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGGAAACTGACATTTCTGGACTCTGTATTTCCTTGAGGTAAGTT  499

seq1  ATCTGGTGCATAGAAAGCATTCTTATTTTAATCTTTCATCTCGCTGTACA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTGCATAGAAAGCATTCTTATTTTAATCTTTCATCTCGCTGTACA  549

seq1  GGTTCCACTCTCTGGGTAATAAGTATAGGAAATCTGGAAGAAAGAAACCA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCACTCTCTGGGTAATAAGTATAGGAAATCTGGAAGAAAGAAACCA  599

seq1  CACATGAGTATATGCATACCCTGTGCTAGCAACATGCCAGCTCTGTCATT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGAGTATATGCATACCCTGTGCTAGCAACATGCCAGCTCTGTCATT  649

seq1  GGCCACCATGTGACTTTAAGTCATTTCTGGTGAGGCTGGATTCATCAGCA  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCACCATGTGACTTTAAGTCATTTCTGGTGAGGCTGGATTCATCAGCA  699

seq1  CATCTCAGTCTGAGGGAAGTGAGAGGGAGCGGATGAGATGAAAGGACTGG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCAGTCTGAGGGAAGTGAGAGGGAGCGGATGAGATGAAAGGACTGG  749

seq1  ACGATGCACACTGGCCTAGCCTGGAGCTGAGTCACTCACTACATCAACGG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGATGCACACTGGCCTAGCCTGGAGCTGAGTCACTCACTACATCAACGG  799

seq1  AGATCGGGAATTACAGAAGATTTTAGTTTTAGCTTCTCATCTGACTAAGA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCGGGAATTACAGAAGATTTTAGTTTTAGCTTCTCATCTGACTAAGA  849

seq1  CTTAAAAGATTTACAGAAAACAGATTGTGGGGTCGGGGGACAGAAGTATG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGATTTACAGAAAACAGATTGTGGGGTCGGGGGACAGAAGTATG  899

seq1  GTAGTGTGGAGAGGAAAGTGGAGACGCGGTGAACACATCCAGTAGAACTC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTGTGGAGAGGAAAGTGGAGACGCGGTGAACACATCCAGTAGAACTC  949

seq1  ATCAAATAAAAACACTGCCTCCCGCTCACAGAACACAGAGACCAGGAGAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATAAAAACACTGCCTCCCGCTCACAGAACACAGAGACCAGGAGAG  999

seq1  GCACATGCGCAGGGCAAGTGTGGCCCAGCAGGTCATTCTTGAATGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCGCAGGGCAAGTGTGGCCCAGCAGGTCATTCTTGAATGAATTC  1049

seq1: chr7_107018709_107019821
seq2: B6Ng01-275P17.g_68_1204

seq1  GAATTCCTTCAGCCTAGTAGAGCTATCTCATGCTGGTAGGTTCTCTGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCAGCCTAGTAGAGCTATCTCATGCTGGTAGGTTCTCTGGGC  50

seq1  TTCCACACTACCTCAGATATTATTGAACTGTTAGGGGTCAGGGCTTCTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACACTACCTCAGATATTATTGAACTGTTAGGGGTCAGGGCTTCTGT  100

seq1  CATGTTCATTGCTATGACCCCAGCTCTCAGCACAAAGTAGATGTCCTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTCATTGCTATGACCCCAGCTCTCAGCACAAAGTAGATGTCCTCAA  150

seq1  ACATCTAGGCAGGCGATGATGTGGCTTCACTACATCATTCGTTTAGCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCTAGGCAGGCGATGATGTGGCTTCACTACATCATTCGTTTAGCAGC  200

seq1  GGTCACAGTGGTGAGCTCTGTGCAGGCTGTGTGGACTCAAAGATGAGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCACAGTGGTGAGCTCTGTGCAGGCTGTGTGGACTCAAAGATGAGTTA  250

seq1  GTCAGACAAGGCCCCTGCTGTTAAAGAGTGTCTATTCTGGAGGGAGGGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGACAAGGCCCCTGCTGTTAAAGAGTGTCTATTCTGGAGGGAGGGGA  300

seq1  ATGTGGACAACAAATGAGTAAATAAATAATATAAAGATTATAGTTAATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGACAACAAATGAGTAAATAAATAATATAAAGATTATAGTTAATTC  350

seq1  CAAGGTTAGATTAATTGCTAATGTGGAAGATAACAGATTATAGAACATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTTAGATTAATTGCTAATGTGGAAGATAACAGATTATAGAACATCA  400

seq1  TCATGATATTTAAATGGGCTTACTATGAACGTCATATTCTTATTTTGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATATTTAAATGGGCTTACTATGAACGTCATATTCTTATTTTGTTT  450

seq1  TTTTGTTTTGTTTTTTTCAATTTTTAAGATAGGGTTCCATGTAACCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTTTTCAATTTTTAAGATAGGGTTCCATGTAACCCAGG  500

seq1  CTGGCCTTAAACTTGCTGTGTAGCCAAGGGTGACCTTGGGTCCTCCTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCTTAAACTTGCTGTGTAGCCAAGGGTGACCTTGGGTCCTCCTAGT  550

seq1  TCCACTTTCTGAATACTGAGATTACAGGTGTGCTCCACTATAACAAGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTTTCTGAATACTGAGATTACAGGTGTGCTCCACTATAACAAGTTT  600

seq1  TATGTAGTGAGGGGGCGGGGGAAACTGAGGTTTCCGTGTATGCTAGGCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTGAGGGGGCGGGGGAAACTGAGGTTTCCGTGTATGCTAGGCAA  650

seq1  ACGCTTGGCCAACAGAGTTACATCCCTAGGAGTCATATTAGTCTTTTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTGGCCAACAGAGTTACATCCCTAGGAGTCATATTAGTCTTTTTGC  700

seq1  TGATGTATAAAATTGAGGTCACCGAGCCTAGCATTGAGAGATTAATCCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGTATAAAATTGAGGTCACCGAGCCTAGCATTGAGAGATTAATCCTT  750

seq1  CGTGCTGACAGGGATCAGGG-AAGACATCACATAACAGGAAGAATCTGAT  799
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CGTGCTGACAGGGATCAGGGAAAGACATCACATAACAGGAAGAATCTGAT  800

seq1  CCTGTCTCTTAACCGAACAGTAGCCTTGGGAGATGAGGAAGGAA-TTGTG  848
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CCTGTCTCTTAACCGAACAGTAGCCTTGGGAGATGAGGAAGGAATTTGTG  850

seq1  CAG-CCATCCCCCTCTTTTATCA-TAAGCCAGTTCATCCATAGTA-TACG  895
      ||| ||||||||||||||||||| ||||||||||||| ||||||| ||||
seq2  CAGCCCATCCCCCTCTTTTATCATTAAGCCAGTTCATTCATAGTATTACG  900

seq1  CC-TCACTG-AGTTTAGAGGCT--CTCGAATGAG-ACATGTGCACAGACA  940
      || |||||| ||||||||||||   ||||||||| |||||||||||||||
seq2  CCTTCACTGAAGTTTAGAGGCTTCTTCGAATGAGAACATGTGCACAGACA  950

seq1  CTTCAGCAGTAGTGAGTGC-TTGGTAG-TGTAG-TACTCAGGAGA-TAAA  986
      ||||||||||||||||||| ||| ||| ||||| ||||   |||| ||||
seq2  CTTCAGCAGTAGTGAGTGCTTTGTTAGTTGTAGTTACTTCAGAGATTAAA  1000

seq1  TTAG-AGATAAATTACGCATTAGAGACAAATA-TTCTGT-ATTCATATCC  1033
      |||| ||||||||||||||| |||||  |||| |||||| ||||||||| 
seq2  TTAGAAGATAAATTACGCATAAGAGAACAATATTTCTGTAATTCATATCT  1050

seq1  TTGTTTTCAGAGGCGTTTGG--CCTTACTCAC-TGTTCCAATCTTCCCCA  1080
      ||||||  |  ||||||| |  | |||||||| ||||| |||||| ||||
seq2  TTGTTTCAATGGGCGTTTTGACCTTTACTCACTTGTTCAAATCTTTCCCA  1100

seq1  CAGG-CCGGGGACACT--GGATAGTGG-TCCGGAAAG  1113
      |||| ||||| |||||  | ||||||| ||||||| |
seq2  CAGGCCCGGGAACACTTGGAATAGTGGTTCCGGAAGG  1137