BAC Information

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BAC

Clone NameB6Ng01-277A19
Chromosome7 (Build37)
Map Location 151,733,385 - 151,833,513
singlet/doubletdoublet
Overlap genePpfia1, Fadd, Tmem16a
Upstream geneNap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn
Downstream geneLOC669079, LOC677315, Fgf3, Fgf4, Fgf15, Oraov1, Ccnd1, 1810010D01Rik, LOC100040049, Tpcn2, Mrgprf, Mrgprd
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277A19.bB6Ng01-277A19.g
ACCGA077672GA077673
length1,122589
definitionB6Ng01-277A19.b B6Ng01-277A19.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(151,733,385 - 151,734,527)(151,832,925 - 151,833,513)
sequence
gaattcaataaacacttttctggttttgttttgtttttttccaatcaggt
ccatccaggctaacttagaaaccatttcgtagcccagaatagcctcacac
ttagtaacatagtagtcttcctccctcagcctccctagtactgagccacc
acacaggaatatcacatatgagttttttcaaaatcattaagaagatcctg
agtttgagaccatctgggctacagcaagaacctgtctcaaaaaacaattg
aacaaatttaaaaaaaaaaaaaaaaaaaggactgttaggaagcatagaaa
gaagtgtctcatacttaacagagaatgtttatttaccaaagcctttcagt
aactattgcaattgcagatagaacagtgcacgaatgcttccaggagcaaa
acaagagcccgtaacaaccatgggtggcagttacatcctgtgttgaagaa
ttcagccagtccaactccacaagaaaatcatcaatcaatcagagatccag
agcaggagtgagaaagcaactccaaatcctaaaactcagttcttgttgag
tgtggagtccacacctataatcccagcttttaggaatctggggtaggaaa
atcacaaattgaaactcacctgatcaacagagatcaagttttaaaaaaaa
aaaaaaaaaaggcaaaagtcagttctctttaggaactagagatatgggtc
agcagtttaagagtacctggctacccttccaggggacccagggttcaatt
tccagcacccacatggtgtctcacaaccgcatataactccaatcccaggg
aatccaacaccttttctggccttcaagggtactgcatgcaggtggggaac
agatatccatacagaaaaaaaaataaccatacacataaaaacaaataaat
gttcaagacagtattttttaaataagccagttctatctcaatacaccaac
ataaatagtacacgctgtgtctactgtagactcaagagcatgctgaaaag
acactggcccacagagtagatagacatgtcagataaagtcatgcagctga
ctgtgtgtgtgtatgtggccacacatgccaaggtcaatataactacagga
ttgcttcccttcctctccacta
gaattctctccttatcgtctttatggaaacaggaacgaggtcatgtgtgg
ggcttgggtggtgtgtgagccccagacagagctggaacttgccaaatgtg
gaatgtagcatagtccaggaacccagagcaggagggaaagaagacagggc
tgggggtcagccgacccagaccctgttctggtctcttgatttcactggcc
tcgagcagtctggttagagacctggtgtcctggtaagactggtgcctgtc
taacagcatggcagatgtggatgtcagagcaagcccaggcaagaaaccac
tttcaggattgctaaaatagctagcgcagggggaccttggcagagaggcc
atgcttttcccacccccaactggagccttccccacctgcagagccagaga
tttggggtcagttggcccagcctccctactttgtgcctttgcatgagctg
ttctactggactgacagcgatgcttcacctgccttttctccagcaccctt
gatttcatcttcccttcactgtccttccaatgccccttatcccatagtgt
ggccactctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_151733385_151734527
seq2: B6Ng01-277A19.b_44_1165

seq1  GAATTCAATAAACACTTTTCTGGTTTTGTTTTGTTTTTTTCCAATCAGGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATAAACACTTTTCTGGTTTTGTTTTGTTTTTTTCCAATCAGGT  50

seq1  CCATCCAGGCTAACTTAGAAACCATTTCGTAGCCCAGAATAGCCTCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCAGGCTAACTTAGAAACCATTTCGTAGCCCAGAATAGCCTCACAC  100

seq1  TTAGTAACATAGTAGTCTTCCTCCCTCAGCCTCCCTAGTACTGAGCCACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTAACATAGTAGTCTTCCTCCCTCAGCCTCCCTAGTACTGAGCCACC  150

seq1  ACACAGGAATATCACATATGAGTTTTTTCAAAATCATTAAGAAGATCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGAATATCACATATGAGTTTTTTCAAAATCATTAAGAAGATCCTG  200

seq1  AGTTTGAGACCATCTGGGCTACAGCAAGAACCTGTCTCAAAAAACAATTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTGAGACCATCTGGGCTACAGCAAGAACCTGTCTCAAAAAACAATTG  250

seq1  AACAAATTTAAAAAAAAAAAAAAAAAAAGGACTGTTAGGAAGCATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAATTTAAAAAAAAAAAAAAAAAAAGGACTGTTAGGAAGCATAGAAA  300

seq1  GAAGTGTCTCATACTTAACAGAGAATGTTTATTTACCAAAGCCTTTCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGTCTCATACTTAACAGAGAATGTTTATTTACCAAAGCCTTTCAGT  350

seq1  AACTATTGCAATTGCAGATAGAACAGTGCACGAATGCTTCCAGGAGCAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATTGCAATTGCAGATAGAACAGTGCACGAATGCTTCCAGGAGCAAA  400

seq1  ACAAGAGCCCGTAACAACCATGGGTGGCAGTTACATCCTGTGTTGAAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAGCCCGTAACAACCATGGGTGGCAGTTACATCCTGTGTTGAAGAA  450

seq1  TTCAGCCAGTCCAACTCCACAAGAAAATCATCAATCAATCAGAGATCCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCCAGTCCAACTCCACAAGAAAATCATCAATCAATCAGAGATCCAG  500

seq1  AGCAGGAGTGAGAAAGCAACTCCAAATCCTAAAACTCAGTTCTTGTTGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGTGAGAAAGCAACTCCAAATCCTAAAACTCAGTTCTTGTTGAG  550

seq1  TGTGGAGTCCACACCTATAATCCCAGCTTTTAGGAATCTGGGGTAGGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGTCCACACCTATAATCCCAGCTTTTAGGAATCTGGGGTAGGAAA  600

seq1  ATCACAAATTGAAACTCACCTGATCAACAGAGATCAAGTTTTAAAAAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACAAATTGAAACTCACCTGATCAACAGAGATCAAGTTTTAAAAAAAA  650

seq1  AAAAAAAAAAGGCAAAAGTCAGTTCTCTTTAGGAACTAGAGATATGGGTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAGGCAAAAGTCAGTTCTCTTTAGGAACTAGAGATATGGGTC  700

seq1  AGCAGTTTAAGAGTACCTGGCTACCCTTCCAGGGGACCCAGGGTTCAATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTTAAGAGTACCTGGCTACCCTTCCAGGGGACCCAGGGTTCAATT  750

seq1  TCCAGCACCCACATGGTGTCTCACAACCGCATATAACTCCAATCCCAGGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCACCCACATGGTGTCTCACAACCGCATATAACTCCAATCCCAGGG  800

seq1  AATCCAACACCTTTTCTGGCCTTCAAGGGTACTGCATGCAGGTGGGGAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCAACACCTTTTCTGGCCTTCAAGGGTACTGCATGCAGGTGGGGAAC  850

seq1  AGATATCCATACAGAAAAAAAAATAACCATACACATAAAAACAAATAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATCCATACAGAAAAAAAAATAACCATACACATAAAAACAAATAAAT  900

seq1  GTTCAAGACAGTATTTTTTAAATAAGCCAGTTCTATCTCAATACACCAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGACAGTATTTTTTAAATAAGCCAGTTCTATCTCAATACACCAAC  950

seq1  AATAAATAGTTACACCGCTGTGTTCTACTGTAGACTCAAAGAGCAATGCT  1000
       |||||||| |||| ||||||| |||||||||||||| |||||| |||||
seq2  -ATAAATAG-TACA-CGCTGTG-TCTACTGTAGACTC-AAGAGC-ATGCT  994

seq1  GAAAAGACACTGGCCCCACAGAGTAGATTAGACATGTTCAAAGATAAAGT  1050
      ||||||||||||| ||||||||||||| |||||||||    |||||||||
seq2  GAAAAGACACTGG-CCCACAGAGTAGA-TAGACATGT---CAGATAAAGT  1039

seq1  CATGCAGCCTGACTGTGTGTGTGTATGTTGGCACACATGCAGAGGTCAAA  1100
      ||||||| |||||||||||||||||||| | |||||||||  ||||||| 
seq2  CATGCAG-CTGACTGTGTGTGTGTATGTGGCCACACATGCCAAGGTCAA-  1087

seq1  TAATAACTTACAGGAATTGCTTCTCTCTCTCCTTCCACCACTA  1143
        ||||| |||||| |||||||| ||   ||||  | ||||||
seq2  -TATAAC-TACAGG-ATTGCTTCCCT---TCCT--CTCCACTA  1122

seq1: chr7_151832925_151833513
seq2: B6Ng01-277A19.g_67_655 (reverse)

seq1  ACACACACACACACACACACACACACACACAGAGTGGCCACACTATGGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACAGAGTGGCCACACTATGGGA  50

seq1  TAAGGGGCATTGGAAGGACAGTGAAGGGAAGATGAAATCAAGGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGGCATTGGAAGGACAGTGAAGGGAAGATGAAATCAAGGGTGCTGG  100

seq1  AGAAAAGGCAGGTGAAGCATCGCTGTCAGTCCAGTAGAACAGCTCATGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAGGCAGGTGAAGCATCGCTGTCAGTCCAGTAGAACAGCTCATGCA  150

seq1  AAGGCACAAAGTAGGGAGGCTGGGCCAACTGACCCCAAATCTCTGGCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCACAAAGTAGGGAGGCTGGGCCAACTGACCCCAAATCTCTGGCTCT  200

seq1  GCAGGTGGGGAAGGCTCCAGTTGGGGGTGGGAAAAGCATGGCCTCTCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGGGGAAGGCTCCAGTTGGGGGTGGGAAAAGCATGGCCTCTCTGC  250

seq1  CAAGGTCCCCCTGCGCTAGCTATTTTAGCAATCCTGAAAGTGGTTTCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCCCCCTGCGCTAGCTATTTTAGCAATCCTGAAAGTGGTTTCTTG  300

seq1  CCTGGGCTTGCTCTGACATCCACATCTGCCATGCTGTTAGACAGGCACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCTTGCTCTGACATCCACATCTGCCATGCTGTTAGACAGGCACCA  350

seq1  GTCTTACCAGGACACCAGGTCTCTAACCAGACTGCTCGAGGCCAGTGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTACCAGGACACCAGGTCTCTAACCAGACTGCTCGAGGCCAGTGAAA  400

seq1  TCAAGAGACCAGAACAGGGTCTGGGTCGGCTGACCCCCAGCCCTGTCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAGACCAGAACAGGGTCTGGGTCGGCTGACCCCCAGCCCTGTCTTC  450

seq1  TTTCCCTCCTGCTCTGGGTTCCTGGACTATGCTACATTCCACATTTGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCCTCCTGCTCTGGGTTCCTGGACTATGCTACATTCCACATTTGGCA  500

seq1  AGTTCCAGCTCTGTCTGGGGCTCACACACCACCCAAGCCCCACACATGAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGCTCTGTCTGGGGCTCACACACCACCCAAGCCCCACACATGAC  550

seq1  CTCGTTCCTGTTTCCATAAAGACGATAAGGAGAGAATTC  589
      |||||||||||||||||||||||||||||||||||||||
seq2  CTCGTTCCTGTTTCCATAAAGACGATAAGGAGAGAATTC  589